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KF005320.1__AGM47220.1__AD45P2_00245__00049
Bact-VirKF005320.1__AGM47220.1__AD45P2_00245__00049
Identity
- Accession:
- KF005320 ↗
- Kingdom:
- phage
Quality
86.0
mean pLDDT
Taxonomy
TaxID: 1300005
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-56
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02646.23 best | RmuC | 26.8 | 3.70e-06 | 82.1% | 14.1% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2j7aC00 | 1.10.3820.10 | Mainly Alpha › Orthogonal Bundle › Multiheme cytochrome fold › Di-heme elbow motif domain | 0.63 | 49.0 | 3.60e-01 | 83.9% | 35.2% |
| 6adqB01 | 1.20.810.10 | Mainly Alpha › Up-down Bundle › Cytochrome Bc1 Complex; Chain C › Cytochrome Bc1 Complex; Chain C | 0.62 | 54.0 | 3.21e-01 | 100.0% | 66.2% |
| 4ewtA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 39.0 | 2.62e-01 | 82.1% | 94.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3731997 | 3831.1.1.0 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 | 0.87 | 56.0 | 4.19e-01 | 73.2% | 29.6% |
| 3250416 | 1134.1.2.3 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain › NuA4 (DEPRECATED) | 0.69 | 62.0 | 5.45e-01 | 98.2% | 100.0% |
| 3787848 | 101.1.2.466 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C | 0.68 | 35.0 | 3.12e-01 | 87.5% | 34.6% |
| 3993627 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 48.0 | 4.46e-01 | 78.6% | 100.0% |
| 3543998 | 1081.1.1.1 ↗ | alpha arrays › Glycogen debranching enzyme (GDE) insertion domain › Glycogen debranching enzyme (GDE) insertion domain › Glycogen debranching enzyme (GDE) insertion domain › hDGE_amylase | 0.58 | 49.0 | 3.66e-01 | 94.6% | 59.3% |
| 4632897 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.55 | 49.0 | 3.98e-01 | 96.4% | 86.0% |
| 3945343 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.53 | 47.0 | 2.85e-01 | 96.4% | 19.1% |