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KF024728.2__WEV84061.1__PBI_MUDDY_17__00017
Bact-VirKF024728.2__WEV84061.1__PBI_MUDDY_17__00017
Identity
- Accession:
- KF024728 ↗
- Kingdom:
- phage
Quality
80.2
mean pLDDT
Taxonomy
TaxID: 1340829
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 20-128
Domain cluster:
rep: OR253904.1__WNM74109.1__SEA_NERGAL_18__00019__D52-135
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 32.0 | 3.52e-01 | 75.2% | 67.1% |
| 2r7rA05 | 1.10.357.80 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.56 | 40.0 | 3.50e-01 | 76.1% | 72.2% |
| 2ob9A00 | 3.30.2220.20 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like | 0.56 | 44.0 | 4.47e-01 | 84.4% | 91.6% |
| 1hbxA01 | 3.40.1810.10 | Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box | 0.55 | 25.0 | 2.96e-01 | 98.2% | 60.6% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 28.0 | 3.24e-01 | 98.2% | 67.1% |
| 1vwxg01 | 6.20.370.70 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.54 | 21.0 | 3.18e-01 | 90.8% | 97.3% |
| 3foeA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.51 | 26.0 | 3.15e-01 | 78.9% | 73.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5022036 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 36.0 | 3.38e-01 | 75.2% | 49.6% |
| 4019036 | 304.3.1.15 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › PF31052 | 0.54 | 29.0 | 3.43e-01 | 79.8% | 78.6% |
| 3414919 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.53 | 28.0 | 3.55e-01 | 78.0% | 98.2% |
| None | — | 0.52 | 42.0 | 3.50e-01 | 89.9% | 71.4% | |
| 4079870 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.52 | 40.0 | 2.82e-01 | 82.6% | 84.8% |
| 3324171 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 29.0 | 3.41e-01 | 89.9% | 82.9% |
| 3444901 | 4954.1.1.0 ↗ | a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit | 0.51 | 27.0 | 2.40e-01 | 74.3% | 29.7% |
| 3483771 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.51 | 29.0 | 3.11e-01 | 81.7% | 62.1% |
| 3203463 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.50 | 30.0 | 2.86e-01 | 73.4% | 48.5% |
| 3453248 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 25.0 | 3.22e-01 | 78.0% | 89.1% |