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KF114878.1__AGS80664.1__LEP1GSC052_0083__00020

Bact-Vir

KF114878.1__AGS80664.1__LEP1GSC052_0083__00020

Identity

Accession:
KF114878 ↗
Kingdom:
phage

Quality

89.0 mean pLDDT

Taxonomy

Leptospira_phage_vb_LkmZ_Bejolso9-LE1

TaxID: 1334244

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-204
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02586.20 best SRAP 132.4 2.40e-38 99.0% 88.8%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2icuA00 3.90.1680.10 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like 0.86 79.0 7.80e-01 100.0% 90.5%
2f20A00 3.90.1680.10 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like 0.85 82.0 7.74e-01 100.0% 90.1%
5ko9A00 3.90.1680.10 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like 0.83 79.0 7.23e-01 100.0% 91.7%
2bdvA00 3.90.1680.10 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like 0.83 78.0 7.68e-01 100.0% 92.5%
1zn6A00 3.90.1680.10 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like 0.81 77.0 7.64e-01 100.0% 97.6%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 22.0 3.06e-01 99.0% 66.7%
3mr0A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 21.0 2.68e-01 95.5% 58.2%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 25.0 3.20e-01 93.5% 79.5%
4hgzA02 2.20.25.570 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.51 14.0 2.35e-01 100.0% 65.0%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 22.0 2.95e-01 99.0% 73.3%
6zj8D01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 21.0 2.76e-01 97.5% 64.9%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4982420 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.88 83.0 8.01e-01 100.0% 89.1%
2507098 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.86 83.0 7.94e-01 100.0% 88.1%
3980642 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.86 81.0 8.16e-01 100.0% 97.5%
4961850 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.86 80.0 7.85e-01 100.0% 91.1%
3504543 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.85 64.0 6.68e-01 75.6% 89.7%
7664 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.85 82.0 7.77e-01 100.0% 90.9%
3967066 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.85 74.0 7.43e-01 100.0% 89.2%
3310153 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.84 81.0 7.65e-01 100.0% 90.9%
4028844 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.84 81.0 7.40e-01 100.0% 87.6%
3283542 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.84 81.0 7.32e-01 100.0% 88.6%
4978983 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.83 80.0 7.54e-01 100.0% 88.1%
7663 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.83 78.0 7.68e-01 100.0% 92.5%
3182340 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.82 79.0 7.36e-01 100.0% 92.5%
3389786 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.81 78.0 7.07e-01 100.0% 93.0%
3170339 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.81 78.0 7.43e-01 100.0% 90.8%
7662 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.81 77.0 7.65e-01 100.0% 98.1%
3786410 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.81 77.0 6.91e-01 100.0% 92.2%
3672236 4188.1.1.1 ↗ a+b complex topology › BB1717-like › BB1717-like › BB1717-like › SRAP 0.80 56.0 6.09e-01 70.6% 98.2%
4958429 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 24.0 3.38e-01 91.0% 86.3%