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KF114878.1__AGS80670.1__LEP1GSC052_0082__00019

Bact-Vir

KF114878.1__AGS80670.1__LEP1GSC052_0082__00019

Identity

Accession:
KF114878 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

Taxonomy

TaxID: 1334244

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-157
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mc8A00 3.10.450.590 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.78 67.0 6.72e-01 97.3% 92.1%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 66.0 6.70e-01 99.1% 97.2%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 53.0 5.53e-01 94.7% 85.4%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 58.0 5.82e-01 100.0% 87.7%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.70 61.0 6.22e-01 95.6% 100.0%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.70 46.0 5.21e-01 100.0% 88.5%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 58.0 5.89e-01 97.3% 91.9%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.69 48.0 5.29e-01 96.5% 90.1%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.69 36.0 4.58e-01 91.2% 88.9%
1tuhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 63.0 5.96e-01 100.0% 92.4%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 62.0 6.01e-01 99.1% 92.7%
3f8xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 60.0 5.75e-01 99.1% 84.1%
4u13A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 57.0 5.85e-01 95.6% 97.2%
3fljA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 60.0 5.56e-01 100.0% 78.7%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.66 44.0 4.09e-01 99.1% 54.7%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 60.0 5.92e-01 100.0% 96.7%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 59.0 5.64e-01 99.1% 89.5%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.64 42.0 3.80e-01 100.0% 49.0%
4n6tA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 44.0 4.99e-01 100.0% 100.0%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.63 39.0 3.63e-01 99.1% 48.6%
3kspA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 56.0 5.37e-01 100.0% 95.3%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.61 43.0 3.93e-01 99.1% 55.5%
2kxgA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 43.0 4.62e-01 98.2% 87.4%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.60 39.0 4.37e-01 90.3% 89.0%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.60 43.0 4.17e-01 100.0% 66.4%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.59 51.0 4.95e-01 97.3% 86.2%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.57 38.0 4.41e-01 71.7% 91.7%
3ci0J01 3.10.610.10 Alpha Beta › Roll › Pili subunits › GSPII I/J protein-like 0.57 40.0 4.18e-01 100.0% 78.8%
1fuwA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 41.0 4.47e-01 99.1% 96.7%
2l4vA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 43.0 4.09e-01 100.0% 71.1%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.54 39.0 2.90e-01 100.0% 29.0%
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.54 38.0 4.21e-01 72.6% 93.4%
3hlzB01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.52 40.0 3.73e-01 79.6% 83.6%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 45.0 3.34e-01 100.0% 48.6%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.51 45.0 3.64e-01 96.5% 92.5%
1pzdA01 2.60.40.1480 Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain 0.51 42.0 3.82e-01 90.3% 66.0%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.51 32.0 2.94e-01 100.0% 47.4%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4960364 243.1.1.23 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.85 75.0 7.79e-01 98.2% 100.0%
4104010 243.1.1.23 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.83 67.0 7.22e-01 92.0% 100.0%
154822 243.1.1.23 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.82 71.0 7.09e-01 97.3% 91.2%
3588750 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.75 48.0 5.71e-01 97.3% 97.3%
3241172 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.72 66.0 6.60e-01 100.0% 99.1%
5041343 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.71 43.0 5.16e-01 96.5% 92.0%
2883156 243.1.1.17 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TpcC 0.69 53.0 5.16e-01 98.2% 74.8%
3251351 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.69 61.0 6.03e-01 97.3% 98.3%
4405445 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 43.0 5.08e-01 98.2% 100.0%
4993469 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 46.0 5.25e-01 97.3% 96.2%
3924297 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.68 52.0 5.46e-01 95.6% 90.0%
3820010 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.68 44.0 3.89e-01 100.0% 45.6%
3303563 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.68 43.0 3.86e-01 100.0% 45.6%
3269464 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 41.0 4.18e-01 91.2% 61.8%
3624756 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.67 52.0 5.37e-01 98.2% 87.5%
5034702 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.67 42.0 3.83e-01 99.1% 47.7%
3573681 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 58.0 5.79e-01 100.0% 93.9%
3508903 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.66 51.0 5.35e-01 97.3% 88.6%
3970479 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.66 41.0 4.98e-01 85.0% 96.0%
3989344 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.65 58.0 5.64e-01 98.2% 89.6%
3966459 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.65 42.0 3.92e-01 96.5% 52.9%
4987012 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.65 41.0 3.71e-01 99.1% 46.7%
3295586 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.63 42.0 3.68e-01 98.2% 46.1%
3824321 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 43.0 4.71e-01 94.7% 87.8%
4936151 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 44.0 3.90e-01 100.0% 50.6%
7051 881.1.1.4 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB 0.63 39.0 3.63e-01 99.1% 48.6%
3783040 243.1.1.41 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Coa1 0.63 48.0 4.62e-01 100.0% 72.0%
2717340 881.1.1.4 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB 0.63 42.0 3.89e-01 97.3% 52.0%
4017453 243.1.1.41 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Coa1 0.63 48.0 4.78e-01 100.0% 78.3%
3323226 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.63 42.0 3.78e-01 98.2% 50.7%
3769924 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.63 52.0 4.95e-01 100.0% 76.9%
3742761 243.1.1.41 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Coa1 0.62 47.0 4.75e-01 100.0% 79.1%
3425790 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.61 47.0 5.06e-01 97.3% 96.8%
3959925 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.61 39.0 4.15e-01 99.1% 73.0%
4124320 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.61 39.0 3.75e-01 93.8% 56.2%
3668642 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.61 49.0 4.92e-01 100.0% 85.2%
4954798 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.60 40.0 3.90e-01 94.7% 61.0%
3825682 243.3.1.1 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.60 43.0 4.62e-01 100.0% 85.9%
4954283 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.60 42.0 3.85e-01 72.6% 74.7%
3395788 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 44.0 4.37e-01 98.2% 72.9%
4104753 243.1.1.92 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26366 0.60 53.0 5.06e-01 100.0% 85.9%
3435224 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.60 35.0 4.32e-01 79.6% 98.5%
4579550 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.60 39.0 3.73e-01 93.8% 56.2%
4941591 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.60 42.0 3.91e-01 73.5% 82.1%
3221575 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.59 37.0 2.73e-01 97.3% 23.3%
5047469 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.59 37.0 3.60e-01 99.1% 54.6%
4117325 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.59 38.0 3.67e-01 92.9% 55.4%
4510000 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.59 38.0 3.84e-01 92.9% 65.5%
4240105 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.58 38.0 3.85e-01 94.7% 64.3%
4955671 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.58 33.0 3.89e-01 84.1% 80.0%
3805100 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.58 43.0 3.63e-01 98.2% 46.8%
4953666 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 44.0 4.06e-01 81.4% 72.4%
4391625 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.57 37.0 3.76e-01 93.8% 65.5%
4245955 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.57 37.0 3.58e-01 93.8% 56.2%
3517320 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 43.0 4.40e-01 99.1% 81.8%
4941093 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 40.0 3.70e-01 73.5% 80.7%
3962603 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 37.0 3.83e-01 98.2% 69.1%
355233 274.1.1.4 a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI 0.56 37.0 4.28e-01 72.6% 93.8%
3262671 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.56 39.0 2.38e-01 71.7% 27.2%
5013768 330.2.1.5 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.56 40.0 4.27e-01 99.1% 89.5%
2410020 881.1.1.4 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB 0.55 44.0 4.04e-01 85.0% 74.3%
4976982 330.6.1.0 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 0.54 36.0 3.67e-01 95.6% 68.2%
4948119 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.54 43.0 4.29e-01 98.2% 81.7%
4026006 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 33.0 3.76e-01 93.8% 87.5%
4974235 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.53 41.0 3.65e-01 83.2% 87.9%
4945303 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.53 47.0 3.33e-01 98.2% 34.3%
5000965 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.51 36.0 3.90e-01 99.1% 90.0%