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KF114878.1__AGS80677.1__LEP1GSC052_0064__00001
Bact-VirKF114878.1__AGS80677.1__LEP1GSC052_0064__00001
Identity
- Accession:
- KF114878 ↗
- Kingdom:
- phage
Quality
76.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 133-269
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b0lC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 45.0 | 5.26e-01 | 78.1% | 95.7% |
| 4asnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 42.0 | 5.05e-01 | 76.6% | 93.3% |
| 1ulyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 41.0 | 4.95e-01 | 79.6% | 93.3% |
| 4chuA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 43.0 | 4.48e-01 | 70.1% | 70.6% |
| 3bpvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 39.0 | 3.99e-01 | 86.1% | 61.3% |
| 4g9yA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 39.0 | 3.94e-01 | 86.1% | 61.0% |
| 2p4wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 39.0 | 4.40e-01 | 83.2% | 81.6% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 40.0 | 4.55e-01 | 85.4% | 87.0% |
| 4xrfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 38.0 | 3.80e-01 | 86.1% | 57.7% |
| 2nnnC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 37.0 | 3.81e-01 | 85.4% | 62.1% |
| 1jgsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 37.0 | 3.71e-01 | 86.1% | 58.7% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 40.0 | 3.96e-01 | 86.1% | 63.1% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 33.0 | 4.20e-01 | 76.6% | 91.0% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 37.0 | 3.73e-01 | 85.4% | 58.5% |
| 1lj9B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 37.0 | 3.68e-01 | 85.4% | 58.5% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 35.0 | 4.38e-01 | 82.5% | 98.8% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 37.0 | 3.59e-01 | 84.7% | 55.6% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 4.31e-01 | 86.9% | 81.7% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 39.0 | 4.14e-01 | 86.1% | 80.0% |
| 1repC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 36.0 | 4.33e-01 | 80.3% | 100.0% |
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.52 | 31.0 | 3.77e-01 | 80.3% | 98.8% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5062023 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 41.0 | 4.41e-01 | 70.8% | 71.3% |
| 4994455 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 39.0 | 4.50e-01 | 70.1% | 79.0% |
| 4950547 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.66 | 41.0 | 4.80e-01 | 75.2% | 88.4% |
| 5075111 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.66 | 42.0 | 4.13e-01 | 81.0% | 59.0% |
| 3784227 | 101.1.2.271 ↗ | alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC | 0.66 | 37.0 | 4.65e-01 | 82.5% | 89.4% |
| 5081199 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.66 | 39.0 | 3.80e-01 | 70.1% | 52.7% |
| 5017942 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.66 | 41.0 | 4.72e-01 | 75.2% | 86.0% |
| 3278012 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 35.0 | 4.65e-01 | 76.6% | 100.0% |
| 4947925 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 39.0 | 3.73e-01 | 79.6% | 49.7% |
| 5069995 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.65 | 39.0 | 3.26e-01 | 76.6% | 35.6% |
| 5002856 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.65 | 39.0 | 4.21e-01 | 72.3% | 68.3% |
| 4927759 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.64 | 38.0 | 3.67e-01 | 73.0% | 50.6% |
| 4945774 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 43.0 | 5.01e-01 | 74.5% | 94.0% |
| 4507638 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.64 | 39.0 | 3.65e-01 | 82.5% | 49.1% |
| 4344487 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.64 | 39.0 | 3.66e-01 | 82.5% | 49.1% |
| 4983992 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.64 | 39.0 | 3.74e-01 | 72.3% | 52.9% |
| 4978591 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.64 | 38.0 | 4.31e-01 | 82.5% | 77.1% |
| 4947948 | 101.1.2.876 ↗ | alpha arrays › HTH › HTH › winged helix domain › tRNA-synt_2d | 0.64 | 39.0 | 4.85e-01 | 81.8% | 100.0% |
| 4957330 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.63 | 37.0 | 3.70e-01 | 70.1% | 54.5% |
| 4646072 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.63 | 40.0 | 3.74e-01 | 81.0% | 51.2% |
| 4970576 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.63 | 38.0 | 3.50e-01 | 81.0% | 45.6% |
| 5055444 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.63 | 38.0 | 4.37e-01 | 81.0% | 82.0% |
| 5042462 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.63 | 38.0 | 3.61e-01 | 81.0% | 49.7% |
| 5031648 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.63 | 39.0 | 3.70e-01 | 81.8% | 51.5% |
| 4941287 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.63 | 38.0 | 4.54e-01 | 81.8% | 90.0% |
| 4965874 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.63 | 37.0 | 3.78e-01 | 80.3% | 59.0% |
| 5013170 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.63 | 39.0 | 4.69e-01 | 75.2% | 94.4% |
| 5005994 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.63 | 40.0 | 4.84e-01 | 79.6% | 97.8% |
| 3604578 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.63 | 40.0 | 4.48e-01 | 83.2% | 82.9% |
| 5029277 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.62 | 39.0 | 4.46e-01 | 82.5% | 82.9% |
| 4478999 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.62 | 38.0 | 3.52e-01 | 80.3% | 47.4% |
| 4993652 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.62 | 38.0 | 3.55e-01 | 81.8% | 47.4% |
| 4930596 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.62 | 38.0 | 3.55e-01 | 81.8% | 48.8% |
| 5028348 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.62 | 38.0 | 3.36e-01 | 80.3% | 42.6% |
| 4561147 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.61 | 38.0 | 4.00e-01 | 83.9% | 66.4% |
| 5039984 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.61 | 38.0 | 3.55e-01 | 80.3% | 50.3% |
| 5007541 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.61 | 39.0 | 4.43e-01 | 82.5% | 83.8% |
| 5070883 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.61 | 37.0 | 4.49e-01 | 82.5% | 93.3% |
| 3548326 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 49.0 | 3.29e-01 | 84.7% | 60.2% |
| 3468223 | 101.1.2.90 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9 | 0.61 | 38.0 | 2.79e-01 | 80.3% | 24.9% |
| 4438513 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.60 | 38.0 | 4.15e-01 | 81.0% | 77.3% |
| 4403519 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 37.0 | 3.48e-01 | 80.3% | 49.4% |
| 4947441 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 35.0 | 4.37e-01 | 70.1% | 94.1% |
| 4974744 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.60 | 37.0 | 3.41e-01 | 83.9% | 46.9% |
| 5054122 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.59 | 39.0 | 3.69e-01 | 83.2% | 55.6% |
| 4985036 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.59 | 38.0 | 3.51e-01 | 82.5% | 50.0% |
| 5016351 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.59 | 37.0 | 4.06e-01 | 83.9% | 74.8% |
| 4527101 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.59 | 37.0 | 3.51e-01 | 80.3% | 53.1% |
| 4943395 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 39.0 | 3.62e-01 | 82.5% | 52.4% |
| 4964954 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.58 | 42.0 | 4.34e-01 | 79.6% | 78.9% |
| 5058653 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 40.0 | 4.26e-01 | 73.0% | 79.2% |
| 5011653 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.58 | 38.0 | 4.24e-01 | 81.8% | 82.7% |
| 5012029 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.58 | 40.0 | 4.22e-01 | 85.4% | 80.0% |
| 4937951 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.57 | 36.0 | 4.13e-01 | 81.8% | 86.0% |
| 4948149 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 36.0 | 3.98e-01 | 85.4% | 78.2% |
| 5003874 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.57 | 41.0 | 4.36e-01 | 80.3% | 85.0% |
| 3497072 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.54 | 39.0 | 4.32e-01 | 76.6% | 100.0% |
| 5047446 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 41.0 | 4.35e-01 | 80.3% | 97.5% |
| 4949226 | 101.1.2.892 ↗ | alpha arrays › HTH › HTH › winged helix domain › ArsR | 0.53 | 45.0 | 4.29e-01 | 91.2% | 96.2% |
| 4957195 | 101.1.2.892 ↗ | alpha arrays › HTH › HTH › winged helix domain › ArsR | 0.53 | 38.0 | 4.35e-01 | 82.5% | 99.0% |
D2
medium
residues 17-83
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dmhA00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.51 | 41.0 | 2.85e-01 | 100.0% | 72.8% |