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KF147891.1__AGS81952.1__PaBG_00068__00068

Bact-Vir

KF147891.1__AGS81952.1__PaBG_00068__00068

Identity

Accession:
KF147891 ↗
Kingdom:
phage

Quality

48.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-106
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.80 59.0 4.90e-01 98.1% 45.4%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.77 61.0 5.03e-01 93.2% 49.1%
1wthD01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 69.0 6.85e-01 97.1% 94.3%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.71 56.0 4.73e-01 90.3% 51.2%
4uhvA01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.66 60.0 4.88e-01 100.0% 72.3%
1eotA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 28.0 3.24e-01 88.3% 51.4%
1twfB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.66 47.0 4.39e-01 72.8% 91.9%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.64 50.0 4.72e-01 93.2% 69.7%
2kvoA01 2.40.30.220 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 0.63 48.0 4.79e-01 100.0% 79.8%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.63 51.0 5.31e-01 87.4% 93.7%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 35.0 2.99e-01 100.0% 34.6%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 36.0 4.02e-01 78.6% 73.4%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 50.0 4.90e-01 94.2% 79.8%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.62 47.0 4.41e-01 86.4% 66.4%
2gjvA00 3.30.2000.10 Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like 0.61 52.0 4.74e-01 94.2% 90.4%
1ddgA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 40.0 3.89e-01 87.4% 61.4%
2ok7A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 43.0 4.25e-01 87.4% 71.4%
3mwbB03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 39.0 4.11e-01 84.5% 73.7%
1qz8A01 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.58 44.0 4.38e-01 93.2% 77.1%
1vi7A01 3.30.230.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Impact, N-terminal domain 0.58 44.0 4.00e-01 78.6% 71.1%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 39.0 3.68e-01 87.4% 57.4%
3u5wA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 49.0 4.62e-01 94.2% 82.5%
3wnoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 38.0 3.86e-01 77.7% 69.0%
2qtlA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 37.0 3.71e-01 84.5% 63.6%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.57 41.0 2.92e-01 93.2% 24.8%
1e62A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 45.0 4.24e-01 87.4% 69.5%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 41.0 4.30e-01 92.2% 84.8%
5ixgA00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.56 42.0 3.63e-01 81.6% 81.0%
1h4uA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.55 48.0 3.60e-01 94.2% 89.8%
2q7aA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 46.0 4.07e-01 93.2% 65.8%
4dqlB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 36.0 3.59e-01 85.4% 63.3%
1a1xA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.54 44.0 4.39e-01 100.0% 84.9%
1lmiA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 46.0 4.30e-01 100.0% 79.4%
1jssA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 42.0 3.39e-01 91.3% 71.9%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943172 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.82 70.0 7.16e-01 98.1% 92.0%
5002750 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.82 72.0 7.22e-01 94.2% 100.0%
3604610 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.82 50.0 6.26e-01 73.8% 98.5%
3977382 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.81 71.0 7.35e-01 96.1% 100.0%
4810019 1.1.13.57 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 0.81 73.0 7.11e-01 96.1% 93.6%
4995815 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.80 71.0 6.62e-01 96.1% 77.6%
4608778 1.1.7.107 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 0.80 55.0 5.22e-01 84.5% 60.8%
5041372 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.79 65.0 6.97e-01 95.1% 100.0%
4809346 1.1.13.57 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 0.79 61.0 6.67e-01 81.6% 98.8%
4988103 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 67.0 6.95e-01 99.0% 100.0%
4888819 1.1.13.10 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_1 0.77 70.0 6.83e-01 97.1% 96.4%
184486 1.1.13.26 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st 0.77 58.0 6.40e-01 98.1% 100.0%
2468519 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 66.0 6.71e-01 93.2% 100.0%
2475124 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 66.0 6.95e-01 91.3% 100.0%
4889788 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 67.0 6.95e-01 93.2% 100.0%
3973341 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 51.0 5.61e-01 86.4% 84.7%
3967435 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.75 63.0 6.60e-01 100.0% 98.9%
3941988 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 65.0 6.32e-01 95.1% 98.3%
3966280 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 62.0 6.49e-01 100.0% 98.9%
3059162 1.1.13.30 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 0.73 65.0 6.07e-01 96.1% 97.6%
4031285 1.1.13.64 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal 0.73 59.0 6.30e-01 100.0% 97.8%
4393593 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.72 60.0 6.26e-01 95.1% 97.9%
3256920 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.72 53.0 4.98e-01 90.3% 64.0%
3966429 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.71 58.0 6.18e-01 96.1% 100.0%
3972305 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.71 58.0 6.13e-01 96.1% 100.0%
3741921 1.1.7.81 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel 0.70 52.0 5.20e-01 86.4% 75.2%
4929587 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 57.0 6.04e-01 89.3% 98.9%
4247994 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.69 58.0 5.94e-01 91.3% 99.0%
1914511 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.69 54.0 5.03e-01 94.2% 66.9%
5002662 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.68 52.0 5.32e-01 87.4% 83.0%
5082881 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.68 61.0 5.68e-01 97.1% 95.2%
4402697 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.68 53.0 5.06e-01 93.2% 70.8%
4551243 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.68 53.0 4.95e-01 93.2% 68.0%
2642579 1.1.13.6 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.68 60.0 5.60e-01 98.1% 93.1%
4562905 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.67 54.0 5.11e-01 97.1% 71.2%
4094235 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.67 55.0 5.12e-01 96.1% 71.2%
3978573 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.67 61.0 6.09e-01 100.0% 99.0%
3900933 11.1.1.54 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 0.67 44.0 4.01e-01 79.6% 49.3%
4217523 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.67 54.0 5.07e-01 94.2% 71.2%
4379249 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.66 54.0 5.07e-01 97.1% 72.0%
4342567 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.66 51.0 4.95e-01 96.1% 73.9%
4952629 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.66 57.0 5.78e-01 99.0% 98.0%
4036849 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.65 55.0 5.04e-01 97.1% 69.9%
3224730 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 52.0 5.10e-01 84.5% 79.1%
4952429 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.64 55.0 5.61e-01 100.0% 97.0%
4344991 1.1.5.35 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF 0.64 54.0 5.06e-01 93.2% 76.2%
4538400 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.63 52.0 4.86e-01 99.0% 72.3%
3058416 1.1.5.39 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › TssD 0.62 55.0 5.14e-01 98.1% 87.4%
3702149 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 49.0 4.25e-01 84.5% 61.3%
4974879 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.62 46.0 3.96e-01 78.6% 67.3%
3363680 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.61 44.0 4.35e-01 86.4% 70.0%
3325109 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.60 43.0 3.39e-01 86.4% 35.0%
3501988 304.102.1.7 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C 0.58 42.0 3.15e-01 73.8% 53.1%
4933784 304.102.1.7 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C 0.58 41.0 3.28e-01 73.8% 61.0%
5055592 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 45.0 4.39e-01 99.0% 73.9%
3382791 60.1.2.2 beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C 0.58 50.0 3.59e-01 97.1% 59.7%
4960006 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 46.0 4.57e-01 93.2% 85.3%
417000 1.1.5.37 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › tPilZ 0.56 48.0 3.93e-01 92.2% 71.9%
3663962 60.1.2.1 beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku 0.55 47.0 3.52e-01 97.1% 55.5%
3730428 4252.1.1.3 beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.54 42.0 3.40e-01 84.5% 86.7%
5062224 11.1.1.131 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EB_dh 0.53 46.0 3.65e-01 97.1% 79.1%
4950859 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 32.0 3.13e-01 100.0% 52.5%
4012027 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 38.0 3.32e-01 77.7% 67.9%
2834609 3437.1.1.1 a+b two layers › Cytochrome P460 › Cytochrome P460 › Cytochrome P460 › Cytochrome_P460 0.51 38.0 3.37e-01 80.6% 95.0%
D2 medium residues 109-179
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3adyA00 3.55.50.60 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › DotD protein 0.75 67.0 5.93e-01 100.0% 68.6%
4uhvA02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.74 65.0 6.00e-01 100.0% 75.0%
7pmpA01 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.69 55.0 5.49e-01 90.1% 85.1%
1krlB00 6.10.140.2000 Special › Helix non-globular › Helix Hairpins › 0.65 29.0 3.47e-01 100.0% 60.4%
1r89A04 3.30.70.1550 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Archaeal tRNA CCA-adding enzyme catalytic domain 0.54 24.0 2.90e-01 78.9% 56.8%
1vbkA01 3.30.70.1510 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like 0.53 32.0 3.03e-01 78.9% 50.6%
7emyA03 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.51 36.0 2.43e-01 74.6% 44.3%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4809347 3070.1.1.16 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 0.87 75.0 7.16e-01 100.0% 80.5%
3977381 3070.1.1.2 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD 0.82 71.0 6.64e-01 100.0% 77.6%
3948879 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.81 68.0 6.67e-01 100.0% 85.3%
3503726 3070.1.1.8 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › DotD 0.79 68.0 6.60e-01 100.0% 85.0%
4988104 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.78 70.0 6.51e-01 100.0% 83.3%
1815424 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.77 63.0 6.24e-01 97.2% 85.3%
146928 3070.1.1.8 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › DotD 0.75 67.0 6.05e-01 100.0% 72.9%
5041373 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.74 66.0 6.27e-01 100.0% 83.5%
5040102 2011.2.1.7 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 0.54 40.0 2.79e-01 80.3% 79.6%
4304410 220.1.1.9 beta barrels › PH domain-like › PH domain-like › PH domain-like › Voldacs 0.50 37.0 2.65e-01 78.9% 94.0%
D3 medium residues 180-247_311-389
PDB