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KF147891.1__AGS81953.1__PaBG_00069__00069
Bact-VirKF147891.1__AGS81953.1__PaBG_00069__00069
Identity
- Accession:
- KF147891 ↗
- Kingdom:
- phage
Quality
73.4
mean pLDDT
Taxonomy
TaxID: 1335230
Cluster
View cluster (23 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-99
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.79 | 50.0 | 5.99e-01 | 71.1% | 100.0% |
| 4b8vA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.77 | 56.0 | 5.97e-01 | 84.2% | 85.1% |
| 1tuzA00 | 1.10.238.110 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Diacylglycerol kinase alpha. | 0.55 | 42.0 | 3.70e-01 | 82.9% | 85.6% |
| 4g6iC02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 41.0 | 3.86e-01 | 81.6% | 93.6% |
| 1tgoA05 | 1.10.132.60 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain | 0.52 | 41.0 | 3.22e-01 | 86.8% | 43.7% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.91 | 63.0 | 7.31e-01 | 73.7% | 98.2% |
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.88 | 75.0 | 7.79e-01 | 89.5% | 98.6% |
| 3587382 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 61.0 | 7.04e-01 | 75.0% | 100.0% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 61.0 | 7.04e-01 | 78.9% | 100.0% |
| 2543722 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 64.0 | 6.32e-01 | 90.8% | 78.5% |
| 3166029 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.80 | 55.0 | 6.25e-01 | 73.7% | 98.2% |
| 4069716 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.78 | 60.0 | 5.04e-01 | 80.3% | 50.8% |
| 3375189 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.77 | 61.0 | 6.34e-01 | 92.1% | 91.4% |
| 4047213 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 52.0 | 5.95e-01 | 72.4% | 100.0% |
| 3422876 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.73 | 55.0 | 6.07e-01 | 85.5% | 100.0% |
| 3611431 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.73 | 51.0 | 5.64e-01 | 72.4% | 93.3% |
| 3716764 | 101.15.1.12 ↗ | alpha arrays › HTH › LysM domain › LysM domain › PF30403 | 0.70 | 49.0 | 5.39e-01 | 72.4% | 93.3% |
| 3811719 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.70 | 60.0 | 4.73e-01 | 92.1% | 91.3% |
| 3950673 | 3536.1.1.1 ↗ | a+b complex topology › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains › YceG | 0.60 | 42.0 | 4.39e-01 | 77.6% | 81.4% |
| 3483773 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 40.0 | 3.31e-01 | 71.1% | 78.6% |
| 3897876 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.57 | 43.0 | 3.27e-01 | 84.2% | 74.6% |
| 3981463 | 3536.1.1.1 ↗ | a+b complex topology › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains › YceG | 0.55 | 41.0 | 3.86e-01 | 82.9% | 72.0% |
| 3253849 | 304.120.1.10 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › PF25904 | 0.55 | 39.0 | 3.89e-01 | 76.3% | 73.8% |
| 5049306 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 39.0 | 3.48e-01 | 77.6% | 70.4% |
| 3460698 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 37.0 | 3.49e-01 | 71.1% | 81.1% |
| 4037999 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.52 | 36.0 | 3.40e-01 | 72.4% | 83.2% |
| 4933514 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.31e-01 | 84.2% | 81.4% |
| 3576254 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 37.0 | 2.28e-01 | 80.3% | 19.1% |