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KF147891.1__AGS81975.1__PaBG_00090__00090

Bact-Vir

KF147891.1__AGS81975.1__PaBG_00090__00090

Identity

Accession:
KF147891 ↗
Kingdom:
phage

Quality

88.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-151
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18143.7 best HAD_SAK_2 65.8 7.80e-18 86.0% 96.4%
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hb0D00 3.40.50.12350 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.72 63.0 5.20e-01 93.3% 98.8%
3umcA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.69 61.0 6.04e-01 93.3% 95.5%
1cqzA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.68 59.0 5.79e-01 92.0% 99.4%
1u02A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.64 57.0 5.68e-01 95.3% 98.0%
3qleA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.64 57.0 5.39e-01 98.0% 92.9%
4ofzA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.62 54.0 4.84e-01 96.0% 86.6%
7vtgA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.59 53.0 4.26e-01 99.3% 99.7%
1dk7A00 3.50.7.10 Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL 0.58 38.0 3.91e-01 91.3% 67.1%
1fs0G01 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.58 42.0 4.47e-01 88.7% 85.4%
2qipA00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.58 47.0 4.66e-01 87.3% 91.3%
2vchA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 50.0 4.19e-01 94.0% 95.7%
1a9xA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 40.0 4.46e-01 88.0% 92.2%
4evwA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 44.0 3.79e-01 84.7% 98.8%
6ifdB00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 42.0 3.64e-01 94.0% 50.9%
6wb4B01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.55 49.0 3.94e-01 99.3% 97.0%
3qxbA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.55 47.0 3.80e-01 94.7% 98.3%
6tr3A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 47.0 3.67e-01 96.7% 96.8%
1sbzD00 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.54 47.0 4.42e-01 95.3% 95.7%
3gdwB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.53 37.0 3.90e-01 93.3% 77.5%
4djaA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 42.0 4.16e-01 84.7% 78.5%
7zllA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 43.0 3.54e-01 86.7% 93.4%
3aptA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.53 45.0 3.71e-01 95.3% 94.9%
8a0cA02 3.40.50.12580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CDP-glycerol glycerophosphotransferase, C-terminal domain 0.53 45.0 4.13e-01 93.3% 74.9%
1ab5A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 40.0 4.33e-01 94.0% 97.6%
3r4vA01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.52 46.0 3.76e-01 98.0% 85.9%
1s4nB00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.52 43.0 3.38e-01 89.3% 83.9%
2x6rB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 40.0 3.61e-01 81.3% 93.4%
3ke0A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 41.0 3.13e-01 85.3% 75.3%
2j48A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 39.0 4.24e-01 93.3% 97.5%
5djsA02 3.40.50.11380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 45.0 4.18e-01 94.0% 84.0%
3c7aA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 44.0 4.00e-01 92.7% 89.3%
1ez4B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 39.0 3.96e-01 78.7% 95.2%
5lnmA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 39.0 3.92e-01 78.7% 100.0%
3vrhA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 41.0 3.29e-01 84.0% 52.3%
3busB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 42.0 3.64e-01 88.7% 99.2%
1hnaA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 30.0 3.44e-01 93.3% 75.9%
3hcwA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 40.0 4.17e-01 94.0% 88.6%
7jj9A02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.51 37.0 4.00e-01 74.0% 100.0%
1ebfA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 44.0 4.17e-01 94.0% 96.2%
3gnlA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 41.0 4.06e-01 88.0% 84.2%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3584528 2006.1.1.33 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_SAK_2 0.82 72.0 6.89e-01 92.0% 89.4%
3613437 2006.1.1.33 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_SAK_2 0.81 71.0 6.95e-01 92.0% 88.1%
3594808 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.70 56.0 4.81e-01 83.3% 86.4%
3272841 2006.1.1.4 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF 0.69 60.0 5.32e-01 94.0% 77.2%
5048805 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.69 60.0 5.36e-01 92.7% 98.0%
3410891 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.68 60.0 5.45e-01 94.7% 85.6%
3775314 2006.1.1.40 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › LNS2_PITM1-3 0.68 60.0 5.74e-01 94.7% 90.6%
3413137 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.67 58.0 4.86e-01 94.7% 93.5%
3452896 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.67 58.0 4.62e-01 94.7% 85.3%
5040082 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.66 55.0 5.78e-01 87.3% 97.8%
4973607 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.66 56.0 4.76e-01 90.7% 95.9%
3641278 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.66 57.0 5.08e-01 94.0% 85.6%
3380965 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.66 58.0 5.16e-01 96.0% 87.0%
4335576 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.66 58.0 5.19e-01 94.7% 80.5%
4933793 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.65 57.0 5.45e-01 93.3% 91.2%
4948745 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.65 56.0 4.67e-01 94.0% 92.1%
5041410 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.65 58.0 4.80e-01 96.7% 92.3%
3248042 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.64 55.0 5.21e-01 92.7% 88.3%
3788697 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.64 58.0 4.82e-01 98.0% 86.3%
3248343 7512.1.1.53 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › ALG11_N 0.64 54.0 4.37e-01 92.0% 84.1%
4951828 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.63 55.0 5.20e-01 96.7% 85.9%
5024747 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.63 57.0 5.65e-01 98.7% 100.0%
5065865 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.61 41.0 3.65e-01 92.7% 46.6%
3276859 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.61 52.0 4.99e-01 92.7% 89.6%
4510838 7512.1.1.81 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_A_1 0.60 52.0 4.53e-01 93.3% 86.5%
4945910 2003.1.14.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace_N 0.59 41.0 4.11e-01 98.7% 70.0%
4976300 7601.1.1.2 a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › DUF362 0.58 48.0 3.78e-01 88.0% 76.5%
3887739 2006.1.4.30 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_TASOR 0.58 50.0 5.06e-01 94.0% 96.7%
5043229 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.58 39.0 4.46e-01 94.0% 97.1%
4996436 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.58 50.0 4.38e-01 94.7% 99.6%
5057668 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.57 47.0 4.26e-01 88.7% 88.6%
3992231 12.1.1.102 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_30 0.57 50.0 3.50e-01 96.7% 83.5%
2630372 7563.1.1.7 a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › STALD 0.57 49.0 4.56e-01 94.0% 96.8%
5007769 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.57 46.0 3.96e-01 87.3% 84.5%
3476375 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.57 41.0 3.82e-01 90.7% 60.0%
5023872 2003.1.1.63 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF1890 0.56 48.0 4.95e-01 92.7% 98.6%
2723920 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.56 50.0 4.01e-01 100.0% 95.8%
None 0.56 43.0 3.99e-01 83.3% 78.0%
3933490 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.55 49.0 3.47e-01 99.3% 82.7%
3774477 2488.1.1.1 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase 0.55 48.0 4.64e-01 94.7% 88.2%
None 0.55 47.0 3.99e-01 93.3% 91.4%
4984713 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.55 43.0 3.94e-01 84.7% 78.5%
5044048 7512.1.1.8 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.55 43.0 4.16e-01 92.7% 73.5%
3293955 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.54 40.0 3.18e-01 76.0% 84.8%
3420930 2488.1.1.1 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase 0.54 48.0 4.32e-01 94.0% 71.0%
5042391 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.54 43.0 3.74e-01 84.0% 54.8%
3943846 2003.1.1.42 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_2 0.54 46.0 4.55e-01 93.3% 91.9%
4937043 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.53 42.0 3.18e-01 82.7% 56.1%
5003718 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.53 44.0 4.23e-01 89.3% 97.7%
5006170 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.53 46.0 4.30e-01 94.0% 97.3%
None 0.53 47.0 4.11e-01 100.0% 98.3%
5022266 2005.1.1.14 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.52 41.0 3.85e-01 84.0% 77.9%
1725882 2007.1.3.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Oxidored_q6 0.52 45.0 4.00e-01 94.7% 85.0%
4984720 2484.1.1.333 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1464 0.52 39.0 2.99e-01 79.3% 84.5%
5073889 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.52 40.0 3.25e-01 82.0% 76.6%
5065857 7516.1.1.11 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CTP_transf_3 0.51 44.0 3.77e-01 95.3% 84.3%
5056681 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.51 40.0 3.48e-01 82.7% 89.3%
3604682 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.50 41.0 3.17e-01 87.3% 47.6%