←Back to structures
KF147891.1__AGS82015.1__PaBG_00131__00131
Bact-VirKF147891.1__AGS82015.1__PaBG_00131__00131
Identity
- Accession:
- KF147891 ↗
- Kingdom:
- phage
Quality
52.7
mean pLDDT
Taxonomy
TaxID: 1335230
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-50
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a4kA02 | 2.30.30.1160 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 69.0 | 4.96e-01 | 97.8% | 66.9% |
| 3kbgA03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 62.0 | 5.86e-01 | 84.8% | 82.1% |
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 58.0 | 5.89e-01 | 78.3% | 87.0% |
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 61.0 | 5.69e-01 | 84.8% | 94.7% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 68.0 | 6.16e-01 | 97.8% | 91.9% |
| 2btwA00 | 3.90.70.30 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain | 0.77 | 65.0 | 4.24e-01 | 97.8% | 31.9% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 66.0 | 5.98e-01 | 97.8% | 88.9% |
| 1vq8T00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 65.0 | 4.80e-01 | 97.8% | 65.5% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 64.0 | 5.77e-01 | 97.8% | 78.8% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 63.0 | 5.51e-01 | 95.7% | 82.6% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 62.0 | 5.54e-01 | 97.8% | 80.9% |
| 2ou5A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.74 | 63.0 | 4.27e-01 | 100.0% | 78.9% |
| 3prbA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.73 | 47.0 | 4.85e-01 | 73.9% | 68.2% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 60.0 | 5.49e-01 | 95.7% | 90.5% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 59.0 | 5.21e-01 | 93.5% | 71.0% |
| 3bs1A00 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.71 | 51.0 | 3.91e-01 | 76.1% | 73.8% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 59.0 | 5.34e-01 | 95.7% | 81.5% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 57.0 | 4.88e-01 | 97.8% | 73.5% |
| 3j7yD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 58.0 | 4.92e-01 | 97.8% | 88.9% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 54.0 | 5.02e-01 | 91.3% | 85.5% |
| 4uoyA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.69 | 49.0 | 3.19e-01 | 76.1% | 60.0% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.69 | 52.0 | 5.23e-01 | 84.8% | 93.8% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.68 | 57.0 | 4.15e-01 | 95.7% | 41.2% |
| 1exaA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.68 | 46.0 | 2.94e-01 | 71.7% | 32.6% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 56.0 | 4.73e-01 | 100.0% | 56.5% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 50.0 | 4.14e-01 | 82.6% | 64.0% |
| 6o5cA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.67 | 54.0 | 4.72e-01 | 95.7% | 84.2% |
| 4h4rA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.67 | 49.0 | 3.29e-01 | 78.3% | 50.8% |
| 3lxdA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 52.0 | 3.41e-01 | 84.8% | 50.0% |
| 1gv4A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 52.0 | 3.57e-01 | 87.0% | 92.1% |
| 2ykyB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.66 | 48.0 | 3.16e-01 | 78.3% | 63.0% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 53.0 | 5.27e-01 | 95.7% | 88.0% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.66 | 52.0 | 3.01e-01 | 84.8% | 22.1% |
| 3frnA03 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 55.0 | 5.35e-01 | 95.7% | 86.3% |
| 6e55A01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.66 | 48.0 | 4.17e-01 | 80.4% | 82.4% |
| 3kljA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 52.0 | 3.46e-01 | 87.0% | 90.8% |
| 1fcdA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 51.0 | 3.39e-01 | 87.0% | 93.1% |
| 1s3iA02 | 3.10.25.10 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain | 0.64 | 46.0 | 3.79e-01 | 84.8% | 84.3% |
| 7oiyA01 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.64 | 52.0 | 3.41e-01 | 97.8% | 31.5% |
| 1q1rA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 50.0 | 3.29e-01 | 84.8% | 50.8% |
| 4nogA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.64 | 47.0 | 3.11e-01 | 78.3% | 63.2% |
| 5jciA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 51.0 | 3.31e-01 | 84.8% | 51.7% |
| 3b79A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.63 | 52.0 | 3.93e-01 | 97.8% | 44.0% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 51.0 | 4.99e-01 | 93.5% | 90.0% |
| 2iw3A05 | 2.40.50.990 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 54.0 | 4.12e-01 | 97.8% | 76.1% |
| 3bfmA02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 47.0 | 4.78e-01 | 87.0% | 97.7% |
| 2gv8A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 54.0 | 4.16e-01 | 100.0% | 91.4% |
| 4emiA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 49.0 | 3.34e-01 | 87.0% | 93.2% |
| 1i8dC02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 53.0 | 4.23e-01 | 95.7% | 61.4% |
| 3icsA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 52.0 | 3.28e-01 | 97.8% | 43.4% |
| 2l1sA00 | 3.10.450.160 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr | 0.60 | 45.0 | 3.87e-01 | 87.0% | 59.0% |
| 3aljA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 48.0 | 3.08e-01 | 84.8% | 36.9% |
| 2qf4A02 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.60 | 45.0 | 3.89e-01 | 95.7% | 98.9% |
| 3fg2P02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 48.0 | 3.65e-01 | 97.8% | 91.3% |
| 6pfzD02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 48.0 | 3.06e-01 | 97.8% | 44.0% |
| 2zylA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.57 | 46.0 | 3.50e-01 | 100.0% | 63.7% |
| 3m1uA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.57 | 46.0 | 3.28e-01 | 97.8% | 47.4% |
| 2x45A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 43.0 | 3.21e-01 | 100.0% | 82.6% |
| 4paaA03 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.53 | 39.0 | 2.74e-01 | 84.8% | 25.4% |
| 1vefA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 43.0 | 3.16e-01 | 100.0% | 50.3% |
| 6z0wA01 | 3.40.1690.10 | Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU | 0.52 | 38.0 | 3.04e-01 | 84.8% | 86.8% |
| 6j5cA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.52 | 37.0 | 3.30e-01 | 84.8% | 65.1% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3590911 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 74.0 | 6.42e-01 | 100.0% | 72.9% |
| 3486495 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 66.0 | 4.36e-01 | 87.0% | 29.1% |
| 3938261 | 4.1.1.360 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 | 0.83 | 67.0 | 4.61e-01 | 89.1% | 34.0% |
| 4033299 | 4.1.1.375 ↗ | beta barrels › SH3 › SH3 › SH3 › PF28472 | 0.81 | 71.0 | 5.59e-01 | 100.0% | 53.7% |
| 5064407 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 67.0 | 4.10e-01 | 91.3% | 16.5% |
| 4585317 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.81 | 68.0 | 6.45e-01 | 93.5% | 83.6% |
| 4995901 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 70.0 | 6.58e-01 | 95.7% | 85.5% |
| 4998726 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 68.0 | 5.66e-01 | 95.7% | 58.7% |
| 3590784 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.79 | 66.0 | 5.88e-01 | 93.5% | 70.8% |
| 3300738 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.79 | 69.0 | 4.74e-01 | 97.8% | 46.7% |
| 4010317 | 4.1.1.395 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27398 | 0.78 | 66.0 | 5.87e-01 | 93.5% | 70.8% |
| 4167587 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.78 | 68.0 | 5.52e-01 | 97.8% | 85.9% |
| 4263339 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.78 | 67.0 | 5.60e-01 | 97.8% | 81.2% |
| 4639331 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.78 | 67.0 | 4.87e-01 | 97.8% | 56.0% |
| 4998870 | 4.1.1.483 ↗ | beta barrels › SH3 › SH3 › SH3 › RRXRR | 0.77 | 66.0 | 5.37e-01 | 95.7% | 55.3% |
| 5042477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 65.0 | 6.59e-01 | 95.7% | 100.0% |
| 5033075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 68.0 | 6.46e-01 | 100.0% | 89.1% |
| 5015084 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.76 | 51.0 | 4.67e-01 | 71.7% | 53.3% |
| 5022325 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.76 | 52.0 | 4.01e-01 | 71.7% | 47.0% |
| 4947995 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 64.0 | 6.08e-01 | 95.7% | 85.5% |
| 4304846 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.75 | 67.0 | 5.20e-01 | 100.0% | 80.0% |
| 3713527 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.75 | 61.0 | 3.66e-01 | 89.1% | 27.0% |
| 3662384 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 58.0 | 5.71e-01 | 84.8% | 92.0% |
| 3781711 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.75 | 64.0 | 6.09e-01 | 97.8% | 87.3% |
| 3511278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 60.0 | 5.39e-01 | 97.8% | 77.1% |
| 4995677 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 61.0 | 5.79e-01 | 93.5% | 92.7% |
| 3486330 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 63.0 | 6.15e-01 | 97.8% | 92.0% |
| 3961546 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.73 | 61.0 | 5.53e-01 | 97.8% | 78.5% |
| 3700745 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 57.0 | 5.57e-01 | 89.1% | 98.0% |
| 4952854 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.71 | 60.0 | 5.47e-01 | 100.0% | 73.8% |
| 3300848 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.71 | 58.0 | 4.41e-01 | 89.1% | 40.8% |
| 5030430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 60.0 | 5.44e-01 | 100.0% | 76.9% |
| 5050433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 58.0 | 5.85e-01 | 93.5% | 100.0% |
| 5028692 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.71 | 59.0 | 5.41e-01 | 100.0% | 73.8% |
| 3611968 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 55.0 | 4.74e-01 | 89.1% | 98.7% |
| 4540381 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.70 | 52.0 | 3.26e-01 | 80.4% | 62.8% |
| 4964421 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.70 | 59.0 | 5.37e-01 | 100.0% | 78.5% |
| 5043091 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.70 | 58.0 | 5.26e-01 | 100.0% | 75.0% |
| 5040230 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.70 | 58.0 | 5.30e-01 | 100.0% | 78.5% |
| 3929373 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.69 | 58.0 | 5.32e-01 | 93.5% | 93.3% |
| 5023831 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 54.0 | 4.81e-01 | 89.1% | 90.0% |
| 3367433 | 244.1.1.26 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GUB_WAK_bind | 0.69 | 57.0 | 3.89e-01 | 93.5% | 82.9% |
| 5036616 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.69 | 58.0 | 5.14e-01 | 100.0% | 74.3% |
| 3251994 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.68 | 55.0 | 4.02e-01 | 91.3% | 38.0% |
| 5044373 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 58.0 | 5.39e-01 | 97.8% | 88.3% |
| 4981036 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.68 | 50.0 | 5.08e-01 | 84.8% | 91.1% |
| 4997767 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 54.0 | 5.50e-01 | 93.5% | 100.0% |
| 4078661 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.67 | 52.0 | 3.02e-01 | 84.8% | 22.8% |
| 3953750 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.66 | 58.0 | 3.39e-01 | 97.8% | 33.8% |
| 4074070 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.66 | 53.0 | 3.61e-01 | 87.0% | 91.5% |
| 3958929 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.66 | 53.0 | 3.68e-01 | 84.8% | 66.9% |
| 2094867 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.66 | 53.0 | 3.55e-01 | 84.8% | 55.2% |
| 4432975 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.66 | 52.0 | 3.44e-01 | 84.8% | 53.0% |
| 4203509 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.66 | 53.0 | 3.44e-01 | 87.0% | 92.5% |
| 4031565 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.66 | 52.0 | 3.31e-01 | 84.8% | 43.6% |
| 4031992 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.66 | 52.0 | 3.46e-01 | 87.0% | 90.0% |
| 3735552 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.66 | 52.0 | 3.36e-01 | 84.8% | 46.5% |
| 3637462 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.66 | 51.0 | 2.94e-01 | 84.8% | 38.2% |
| 3735726 | 2003.1.2.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 | 0.66 | 53.0 | 3.24e-01 | 84.8% | 47.9% |
| 2092580 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.65 | 52.0 | 3.89e-01 | 84.8% | 83.5% |
| 3190334 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.65 | 51.0 | 3.04e-01 | 84.8% | 47.7% |
| 5024433 | 2003.1.2.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FCSD_central | 0.65 | 56.0 | 4.05e-01 | 97.8% | 94.1% |
| 4377704 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.65 | 52.0 | 3.65e-01 | 84.8% | 72.9% |
| 4837037 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.65 | 51.0 | 3.83e-01 | 84.8% | 88.3% |
| 4939751 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.65 | 52.0 | 3.45e-01 | 87.0% | 91.9% |
| 4988049 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.65 | 55.0 | 3.94e-01 | 97.8% | 87.6% |
| 4439849 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.65 | 56.0 | 3.30e-01 | 97.8% | 33.0% |
| 4511787 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.65 | 52.0 | 3.24e-01 | 84.8% | 48.8% |
| 3968262 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.65 | 56.0 | 3.30e-01 | 97.8% | 34.7% |
| 3687305 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.65 | 52.0 | 3.00e-01 | 84.8% | 34.2% |
| 5064033 | 2003.1.3.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 | 0.65 | 52.0 | 3.45e-01 | 87.0% | 88.3% |
| 3946539 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.65 | 52.0 | 3.43e-01 | 87.0% | 88.4% |
| 4956750 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.65 | 55.0 | 3.28e-01 | 97.8% | 33.8% |
| 3056290 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.65 | 52.0 | 4.06e-01 | 84.8% | 94.7% |
| 5052762 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.64 | 51.0 | 4.16e-01 | 84.8% | 90.6% |
| 4982631 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.64 | 55.0 | 3.96e-01 | 97.8% | 91.4% |
| 4946779 | 2003.1.3.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 | 0.64 | 55.0 | 3.27e-01 | 97.8% | 33.3% |
| 4200526 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.64 | 51.0 | 3.02e-01 | 87.0% | 78.6% |
| 4949186 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.64 | 53.0 | 3.10e-01 | 87.0% | 81.8% |
| 4989854 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.64 | 55.0 | 3.90e-01 | 97.8% | 88.3% |
| 4965146 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.64 | 51.0 | 3.00e-01 | 87.0% | 79.5% |
| 3590813 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.64 | 47.0 | 4.61e-01 | 78.3% | 78.0% |
| 4938749 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.64 | 54.0 | 3.52e-01 | 97.8% | 57.3% |
| 4965527 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.63 | 53.0 | 3.75e-01 | 97.8% | 81.3% |
| 5064098 | 2003.1.3.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 | 0.63 | 50.0 | 3.13e-01 | 84.8% | 35.8% |
| 3729518 | 2003.1.2.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 | 0.63 | 51.0 | 3.11e-01 | 84.8% | 40.7% |
| 4960658 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.62 | 49.0 | 3.35e-01 | 84.8% | 44.2% |
| 3453503 | 389.1.1.1 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF | 0.62 | 49.0 | 3.84e-01 | 87.0% | 43.4% |
| 3698106 | 2003.1.2.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 | 0.61 | 52.0 | 3.11e-01 | 91.3% | 42.4% |
| 3955132 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.61 | 48.0 | 3.24e-01 | 87.0% | 93.7% |
| 4550525 | 2003.1.2.58 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 | 0.61 | 50.0 | 3.09e-01 | 97.8% | 36.2% |
| 3974596 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 48.0 | 4.61e-01 | 97.8% | 94.5% |
| 3697782 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.58 | 48.0 | 2.90e-01 | 91.3% | 40.3% |
| 4931129 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.54 | 44.0 | 3.75e-01 | 100.0% | 76.5% |
| 5067181 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.53 | 42.0 | 2.50e-01 | 95.7% | 15.9% |
D2
high
residues 345-437
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.73 | 40.0 | 4.93e-01 | 97.8% | 87.7% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 42.0 | 4.72e-01 | 72.0% | 77.5% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.69 | 40.0 | 5.09e-01 | 100.0% | 100.0% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 46.0 | 5.34e-01 | 73.1% | 100.0% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 47.0 | 4.20e-01 | 100.0% | 59.7% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 37.0 | 4.54e-01 | 92.5% | 100.0% |
| 2qf4A02 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.58 | 41.0 | 4.16e-01 | 72.0% | 96.7% |
| 2btwA00 | 3.90.70.30 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain | 0.57 | 51.0 | 3.95e-01 | 100.0% | 88.6% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 39.0 | 4.24e-01 | 94.6% | 83.5% |
| 3s27B01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 45.0 | 4.03e-01 | 100.0% | 60.2% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 43.0 | 4.60e-01 | 81.7% | 93.8% |
| 2fpeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 36.0 | 4.23e-01 | 93.5% | 100.0% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.54 | 40.0 | 2.73e-01 | 77.4% | 83.1% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 42.0 | 2.91e-01 | 84.9% | 92.9% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 39.0 | 4.26e-01 | 90.3% | 91.0% |
| 1adjB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.52 | 44.0 | 4.45e-01 | 93.5% | 93.6% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.52 | 43.0 | 4.16e-01 | 92.5% | 89.7% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 40.0 | 3.42e-01 | 88.2% | 78.9% |
| 1wu7A03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.51 | 42.0 | 4.22e-01 | 92.5% | 92.8% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 44.0 | 3.94e-01 | 100.0% | 82.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 547 | 4.1.1.49 ↗ | beta barrels › SH3 › SH3 › SH3 › KorB_C | 0.74 | 40.0 | 5.14e-01 | 97.8% | 92.6% |
| 3474715 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 40.0 | 4.77e-01 | 94.6% | 78.5% |
| 3584364 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 39.0 | 5.10e-01 | 93.5% | 100.0% |
| 4061621 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 48.0 | 3.74e-01 | 71.0% | 42.6% |
| 4470603 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.62 | 43.0 | 3.50e-01 | 71.0% | 58.2% |
| 3593222 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 44.0 | 4.64e-01 | 95.7% | 86.6% |
| 4018667 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.60 | 41.0 | 3.80e-01 | 100.0% | 56.5% |
| 3795301 | 4.1.1.319 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 | 0.60 | 43.0 | 4.64e-01 | 97.8% | 87.5% |
| 3609116 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 47.0 | 4.33e-01 | 89.2% | 70.1% |
| 3174058 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.56 | 41.0 | 4.48e-01 | 98.9% | 93.3% |
| 158939 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.56 | 43.0 | 4.60e-01 | 81.7% | 93.8% |
| 4927532 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.55 | 47.0 | 4.26e-01 | 93.5% | 94.4% |
| 3477037 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 37.0 | 4.23e-01 | 93.5% | 95.7% |
| 3763497 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.53 | 38.0 | 4.16e-01 | 93.5% | 90.7% |
| 3881117 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 46.0 | 4.53e-01 | 93.5% | 87.0% |
| 3516048 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 44.0 | 4.37e-01 | 93.5% | 84.0% |
| 3628870 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 41.0 | 3.88e-01 | 93.5% | 70.0% |
| 3398023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 44.0 | 3.55e-01 | 90.3% | 91.4% |
| 3878271 | 101.1.2.284 ↗ | alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd | 0.50 | 43.0 | 3.62e-01 | 97.8% | 55.5% |
| 3795223 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 40.0 | 4.19e-01 | 84.9% | 95.3% |
D3
medium
residues 144-209