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KF156338.1__AHB80443.1__S-MbCM7_029__00029

Bact-Vir

KF156338.1__AHB80443.1__S-MbCM7_029__00029

Identity

Accession:
KF156338 ↗
Kingdom:
phage

Quality

54.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Sedonavirus› Synechococcus_phage_ACG-2014h

TaxID: 1340810

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 373-552
PDB
D2 medium residues 13-93_568-581
PDB
Domain cluster: rep: MW117966.1__QPB08094.1__X__00046__D18-92_358-368
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07484.18 best Collar 61.6 7.70e-17 70.5% 77.2%
D3 medium residues 145-238_352-364
PDB
D4 medium residues 239-351
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e26A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.72 54.0 4.88e-01 92.0% 57.4%
7bysA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.72 46.0 4.54e-01 91.2% 60.7%
2wz8A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 48.0 4.48e-01 92.0% 57.8%
7lyuB02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 56.0 4.96e-01 100.0% 62.0%
6m3aA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 36.0 4.46e-01 85.0% 87.9%
2yn5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 37.0 4.32e-01 90.3% 77.2%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 51.0 4.76e-01 92.0% 65.9%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.65 44.0 4.44e-01 100.0% 68.4%
1pmhX00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 53.0 4.54e-01 96.5% 56.8%
2dlgA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 38.0 4.36e-01 91.2% 83.7%
7y8sB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 39.0 4.34e-01 89.4% 82.1%
1qr4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 38.0 4.24e-01 88.5% 78.2%
4c91A04 2.60.120.1620 Mainly Beta › Sandwich › Jelly Rolls › 0.62 48.0 4.10e-01 91.2% 50.3%
4h4nA00 2.60.40.3750 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 33.0 4.20e-01 82.3% 93.5%
4hsaF02 2.60.40.2150 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 0.61 44.0 4.55e-01 90.3% 80.0%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 40.0 4.50e-01 81.4% 88.4%
1o7dC02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 37.0 4.09e-01 84.1% 77.5%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.60 45.0 4.46e-01 100.0% 76.1%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 37.0 3.98e-01 81.4% 72.9%
1ji6A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 43.0 3.84e-01 100.0% 53.1%
1o5uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 28.0 3.12e-01 84.1% 54.5%
3wqbA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 50.0 4.38e-01 96.5% 71.7%
4kh9A01 2.60.40.3870 Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein PF16024, DUF4785 0.57 38.0 3.65e-01 86.7% 58.3%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 38.0 4.02e-01 86.7% 80.6%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 28.0 2.92e-01 83.2% 50.0%
4cj0A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 34.0 3.64e-01 83.2% 71.6%
1o75A04 2.60.40.1270 Mainly Beta › Sandwich › Immunoglobulin-like › Penicillin-binding protein Tp47, domain D 0.53 31.0 3.50e-01 84.1% 76.8%
1dunA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.53 38.0 3.74e-01 87.6% 70.0%
1fltX00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 34.0 3.62e-01 93.8% 75.8%
3omzA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 4.24e-01 91.2% 92.2%
4txwA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 43.0 3.91e-01 92.0% 64.8%
2xtlA02 2.60.40.1140 Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain 0.52 42.0 4.48e-01 99.1% 100.0%
7aj6H01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 4.00e-01 86.7% 79.8%
2xg5B01 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.51 41.0 3.91e-01 89.4% 89.0%
4gqzA00 2.60.40.3700 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 34.0 3.12e-01 86.7% 50.6%
7tzeA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 40.0 4.06e-01 92.9% 90.8%
3b34A04 2.60.40.1840 Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain 0.50 36.0 3.83e-01 89.4% 85.3%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3215049 10.32.1.6 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.72 52.0 5.18e-01 100.0% 73.0%
2321850 11.1.1.245 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_6 0.67 37.0 4.30e-01 90.3% 75.3%
3943690 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.61 33.0 4.32e-01 77.9% 100.0%
3709391 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 47.0 4.58e-01 97.3% 73.6%
3885639 10.2.1.47 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › N-glycanase_C 0.61 55.0 4.92e-01 100.0% 78.1%
3262495 11.1.1.802 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 0.60 35.0 3.88e-01 84.1% 72.9%
3249204 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 39.0 4.17e-01 85.8% 76.8%
4433929 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 38.0 4.15e-01 84.1% 78.9%
3553239 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 35.0 4.02e-01 81.4% 80.0%
3248646 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.59 39.0 3.95e-01 92.9% 66.1%
3259369 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 37.0 3.87e-01 92.0% 72.0%
4469838 10.32.1.215 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29167 0.57 51.0 4.49e-01 98.2% 67.9%
3879432 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 38.0 4.01e-01 92.9% 77.0%
3219455 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.57 44.0 4.30e-01 97.3% 75.2%
3319605 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 36.0 3.59e-01 81.4% 61.7%
5039775 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 50.0 4.14e-01 100.0% 59.0%
3391043 12.1.1.48 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Laman-like_dom 0.54 38.0 3.65e-01 87.6% 63.1%
5034488 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 46.0 4.36e-01 100.0% 78.5%
3346491 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 38.0 3.31e-01 96.5% 46.7%
4978954 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 40.0 3.94e-01 94.7% 72.8%
3756844 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.53 41.0 4.17e-01 93.8% 83.5%
3367119 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.53 37.0 2.69e-01 92.0% 23.4%
4003701 10.10.1.0 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.52 36.0 3.75e-01 86.7% 79.0%
5000812 7.1.1.5 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.52 23.0 2.57e-01 83.2% 48.9%
3945528 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 33.0 3.75e-01 85.0% 92.5%
1937212 1137.1.1.0 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.50 30.0 3.11e-01 100.0% 60.0%
3282019 10.37.1.0 ↗ beta sandwiches › jelly-roll › TerD › TerD 0.50 43.0 3.72e-01 96.5% 74.1%
3662686 12.1.1.48 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Laman-like_dom 0.50 39.0 3.65e-01 86.7% 66.4%
5056893 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.50 43.0 4.26e-01 100.0% 90.0%