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KF296718.1__AGV99456.1__phiCM3_gp28__00028

Bact-Vir

KF296718.1__AGV99456.1__phiCM3_gp28__00028

Identity

Accession:
KF296718 ↗
Kingdom:
phage

Quality

82.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Camtrevirus› Bacillus_phage_phiCM3

TaxID: 1357713

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-54
PDB
D2 high residues 58-150
PDB
Domain cluster: rep: MZ417522.1__QXN67741.1__X__00024__D64-158
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF22022.3 best Phage_int_M 34.2 3.30e-08 98.9% 92.7%
PF14659.13 Phage_int_SAM_3 53.0 4.70e-14 61.3% 94.8%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kd1A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.94 90.0 8.13e-01 100.0% 79.7%
1z19A01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.92 87.0 8.49e-01 100.0% 93.0%
2kobA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.90 83.0 8.34e-01 98.9% 96.8%
3lysA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.90 85.0 8.08e-01 100.0% 88.6%
3nrwA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.89 83.0 8.01e-01 100.0% 92.3%
2kj9A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.88 82.0 7.50e-01 100.0% 78.0%
2kj5A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.87 80.0 7.37e-01 100.0% 79.3%
2kkpA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.86 81.0 7.38e-01 100.0% 81.2%
2khqA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.83 75.0 7.29e-01 100.0% 90.2%
1a0pA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.80 72.0 7.30e-01 100.0% 98.9%
2kiwA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.78 66.0 6.90e-01 92.5% 98.8%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.63 40.0 4.48e-01 100.0% 80.0%
4bbrM00 1.10.472.170 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.63 43.0 3.41e-01 87.1% 33.7%
2nxpB00 1.25.40.500 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain 0.62 43.0 3.68e-01 94.6% 45.5%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 4.67e-01 98.9% 91.5%
1s2xA00 1.20.190.30 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › CAG pathogenicity island protein, CagZ 0.57 42.0 3.47e-01 80.6% 74.4%
2a6hF01 1.20.120.1810 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.56 38.0 3.17e-01 94.6% 36.6%
3fm9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 40.0 4.32e-01 92.5% 89.7%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.55 35.0 3.81e-01 90.3% 79.7%
3sigA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.54 49.0 3.52e-01 100.0% 64.2%
4akgA08 1.10.472.130 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain 0.54 48.0 4.06e-01 98.9% 85.3%
7p2yd01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.54 42.0 4.16e-01 88.2% 80.8%
3f4mA00 1.20.1440.160 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like 0.54 45.0 3.86e-01 94.6% 100.0%
3buxB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 35.0 3.62e-01 97.8% 73.0%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5083073 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.97 93.0 8.88e-01 100.0% 90.5%
3589750 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.96 91.0 8.65e-01 100.0% 86.7%
3957640 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.95 90.0 8.73e-01 100.0% 91.0%
4334667 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.95 91.0 8.89e-01 100.0% 93.0%
3587366 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.95 89.0 8.70e-01 100.0% 91.0%
3588691 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.95 91.0 8.66e-01 100.0% 91.4%
3978656 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.94 90.0 8.28e-01 100.0% 93.0%
3587101 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.94 90.0 8.61e-01 100.0% 90.5%
4437317 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.94 86.0 8.24e-01 100.0% 84.8%
170034 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.94 90.0 8.37e-01 100.0% 85.5%
4172485 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.93 89.0 8.33e-01 100.0% 85.5%
4009383 186.1.1.3 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_5 0.93 89.0 8.18e-01 100.0% 93.0%
4004726 186.1.1.8 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.93 87.0 7.98e-01 100.0% 80.0%
4004484 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.92 88.0 8.06e-01 100.0% 93.0%
4007795 186.1.1.8 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.92 87.0 8.02e-01 100.0% 80.9%
3979029 186.1.1.8 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.92 88.0 8.54e-01 100.0% 93.0%
3291009 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.92 87.0 8.32e-01 100.0% 88.6%
3964236 186.1.1.8 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.92 87.0 7.87e-01 100.0% 80.0%
3965042 186.1.1.8 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.92 87.0 7.97e-01 100.0% 80.9%
3948596 186.1.1.8 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.91 86.0 7.87e-01 100.0% 80.0%
4034350 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.91 87.0 7.98e-01 100.0% 81.7%
2010353 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.91 86.0 7.92e-01 100.0% 80.2%
4031566 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.91 86.0 7.80e-01 100.0% 80.0%
4034068 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.91 86.0 8.41e-01 100.0% 93.0%
3946029 186.1.1.8 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.91 86.0 7.88e-01 100.0% 80.9%
3165066 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.91 85.0 7.70e-01 100.0% 76.7%
3979101 186.1.1.8 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.91 85.0 7.74e-01 100.0% 79.2%
4318189 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.90 85.0 8.15e-01 100.0% 94.3%
4192110 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.90 85.0 8.13e-01 100.0% 89.5%
138576 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.90 85.0 8.18e-01 100.0% 91.2%
3964154 186.1.1.15 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Int_N 0.89 83.0 8.14e-01 100.0% 92.0%
3589876 186.1.1.3 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_5 0.89 84.0 8.19e-01 100.0% 93.0%
4220769 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.89 84.0 8.02e-01 100.0% 95.2%
4090274 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.89 83.0 7.95e-01 98.9% 94.3%
3586879 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.88 83.0 7.38e-01 100.0% 85.6%
3978543 186.1.1.8 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.88 80.0 7.53e-01 100.0% 81.8%
3504160 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.88 82.0 7.73e-01 100.0% 89.1%
4004359 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.88 82.0 7.44e-01 100.0% 82.5%
4040148 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.88 82.0 8.02e-01 100.0% 98.0%
4566550 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.88 82.0 8.02e-01 100.0% 95.0%
4962165 186.1.1.30 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › PF30198 0.88 82.0 7.34e-01 100.0% 86.4%
4655797 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.87 80.0 8.02e-01 97.8% 98.9%
3942146 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.87 82.0 8.00e-01 100.0% 93.0%
3969537 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.87 82.0 7.97e-01 100.0% 98.0%
4362692 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.87 82.0 7.97e-01 100.0% 99.0%
5052501 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.87 82.0 7.97e-01 100.0% 96.0%
3946053 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.87 81.0 7.10e-01 100.0% 70.8%
134568 186.1.1.8 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.87 81.0 7.98e-01 100.0% 98.0%
3984910 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.87 79.0 7.71e-01 100.0% 90.0%
4102411 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.87 82.0 7.67e-01 100.0% 88.2%
4069480 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.87 81.0 7.62e-01 100.0% 89.1%
4173849 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.87 79.0 7.46e-01 97.8% 87.3%
4169335 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.87 80.0 7.84e-01 98.9% 96.0%
4175280 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.87 81.0 7.72e-01 100.0% 98.1%
135076 186.1.1.8 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M 0.87 80.0 7.58e-01 100.0% 85.2%
4965639 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.86 79.0 7.56e-01 97.8% 96.2%
4520087 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.86 80.0 7.81e-01 100.0% 98.0%
4487415 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.86 80.0 7.41e-01 100.0% 85.2%
4396981 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.86 80.0 7.78e-01 100.0% 96.0%
4142699 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.86 80.0 7.79e-01 100.0% 94.0%
4964250 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.86 79.0 7.35e-01 100.0% 85.2%
4220256 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.86 80.0 7.50e-01 100.0% 88.2%
5054950 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.85 79.0 7.08e-01 100.0% 84.0%
3947779 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.85 77.0 7.28e-01 100.0% 82.7%
4959184 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.84 78.0 7.76e-01 98.9% 96.8%
4053946 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.84 77.0 7.71e-01 100.0% 96.8%
3839209 186.1.1.6 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_6 0.84 78.0 6.56e-01 100.0% 89.3%
4160987 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.84 77.0 7.29e-01 100.0% 89.1%
4947439 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.83 72.0 7.35e-01 98.9% 95.6%
4406523 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.82 76.0 7.19e-01 100.0% 87.3%
5028565 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.82 70.0 7.15e-01 98.9% 94.4%
5022016 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.81 71.0 7.14e-01 100.0% 93.7%
4954763 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.80 69.0 7.03e-01 97.8% 96.7%
4999471 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.79 71.0 6.52e-01 98.9% 88.3%
135559 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.78 70.0 6.80e-01 100.0% 89.3%
5055663 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.77 71.0 6.31e-01 100.0% 72.3%
4303782 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.75 68.0 6.21e-01 98.9% 90.0%
3222674 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 42.0 3.31e-01 76.3% 33.5%
3285524 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.56 39.0 3.55e-01 73.1% 91.9%
3716106 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 45.0 2.60e-01 98.9% 12.3%