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KF301602.1__AGS80947.1__X__00062
Bact-VirKF301602.1__AGS80947.1__X__00062
Identity
- Accession:
- KF301602 ↗
- Kingdom:
- phage
Quality
70.6
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 59-95
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p4pA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.74 | 54.0 | 4.21e-01 | 81.1% | 82.1% |
| 2pliA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.71 | 55.0 | 4.34e-01 | 91.9% | 60.7% |
| 2o3gA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.68 | 52.0 | 4.24e-01 | 89.2% | 60.5% |
| 2p13A00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.68 | 53.0 | 4.22e-01 | 91.9% | 62.4% |
| 4amcA01 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.68 | 48.0 | 4.59e-01 | 78.4% | 82.6% |
| 6ro0B01 | 3.10.40.10 | Alpha Beta › Roll › Pertussis Toxin; Chain B, domain 1 › Aerolysin/Pertussis toxin (APT), N-terminal domain | 0.67 | 55.0 | 4.33e-01 | 100.0% | 64.0% |
| 5g5tA02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.64 | 50.0 | 3.26e-01 | 100.0% | 41.7% |
| 2rtsA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.62 | 51.0 | 4.22e-01 | 100.0% | 61.6% |
| 1goiB03 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.62 | 50.0 | 4.69e-01 | 100.0% | 86.3% |
| 3c4nA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.62 | 50.0 | 3.64e-01 | 100.0% | 56.8% |
| 3hjhA02 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.62 | 47.0 | 3.70e-01 | 100.0% | 36.0% |
| 3wx7A02 | 2.10.10.90 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.61 | 48.0 | 3.75e-01 | 94.6% | 49.5% |
| 1wvvB01 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.61 | 48.0 | 4.62e-01 | 100.0% | 93.8% |
| 1yueA02 | 2.10.10.40 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.61 | 46.0 | 4.18e-01 | 97.3% | 93.4% |
| 2yq2A01 | 2.60.320.20 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › Pestivirus envelope glycoprotein E2, domain A | 0.60 | 48.0 | 3.74e-01 | 94.6% | 53.4% |
| 3vmaA03 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.60 | 45.0 | 3.58e-01 | 89.2% | 83.3% |
| 1aiwA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.60 | 48.0 | 4.25e-01 | 100.0% | 85.5% |
| 1usgA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 47.0 | 3.27e-01 | 97.3% | 28.5% |
| 4lxqB00 | 3.40.50.12230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 42.0 | 2.58e-01 | 81.1% | 10.9% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.58 | 45.0 | 3.20e-01 | 91.9% | 48.4% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 43.0 | 3.62e-01 | 89.2% | 56.5% |
| 4le7A02 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.55 | 42.0 | 3.43e-01 | 94.6% | 42.7% |
| 4omfA00 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.55 | 42.0 | 2.48e-01 | 94.6% | 72.5% |
| 4gc1A01 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.53 | 42.0 | 3.24e-01 | 100.0% | 91.3% |
| 1qhuA01 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.53 | 45.0 | 2.89e-01 | 100.0% | 33.3% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3226732 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.72 | 54.0 | 5.55e-01 | 89.2% | 88.6% |
| 3771732 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.70 | 49.0 | 4.81e-01 | 75.7% | 82.5% |
| None | — | 0.67 | 50.0 | 2.73e-01 | 100.0% | 5.1% | |
| 5009920 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.67 | 51.0 | 3.02e-01 | 86.5% | 19.0% |
| 3990241 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.67 | 50.0 | 4.86e-01 | 89.2% | 74.4% |
| 3416800 | 391.1.1.12 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › FnI_RECK | 0.65 | 47.0 | 4.85e-01 | 89.2% | 88.6% |
| 5001934 | 2004.1.1.554 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter | 0.64 | 48.0 | 2.74e-01 | 100.0% | 7.6% |
| 3230187 | 391.1.2.9 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 | 0.64 | 48.0 | 3.97e-01 | 89.2% | 42.7% |
| 1883379 | 1103.1.1.1 ↗ | mixed a+b and a/b › uncharacterized protein LPG2148 insertion domain › uncharacterized protein LPG2148 insertion domain › uncharacterized protein LPG2148 insertion domain › MvcA_ins | 0.64 | 50.0 | 4.00e-01 | 100.0% | 42.4% |
| 5026481 | 64.3.1.3 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12_2 | 0.63 | 52.0 | 4.85e-01 | 100.0% | 88.0% |
| 3972100 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.62 | 50.0 | 4.38e-01 | 100.0% | 70.8% |
| 4009007 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.62 | 48.0 | 4.58e-01 | 97.3% | 92.0% |
| 4307941 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.62 | 50.0 | 4.47e-01 | 100.0% | 98.3% |
| 3936314 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.62 | 45.0 | 4.63e-01 | 89.2% | 91.4% |
| 2389402 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.62 | 50.0 | 4.58e-01 | 100.0% | 81.5% |
| 3222227 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.62 | 42.0 | 2.52e-01 | 75.7% | 10.8% |
| 3971347 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.61 | 48.0 | 4.36e-01 | 100.0% | 84.5% |
| 1002430 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.61 | 46.0 | 4.18e-01 | 97.3% | 93.4% |
| 4521206 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.60 | 43.0 | 3.66e-01 | 81.1% | 72.9% |
| 4009839 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 44.0 | 3.40e-01 | 81.1% | 32.6% |
| 3617004 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 51.0 | 3.61e-01 | 100.0% | 40.9% |
| 3514491 | 5.1.4.242 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N | 0.60 | 47.0 | 2.68e-01 | 91.9% | 10.0% |
| 4009008 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.59 | 48.0 | 4.34e-01 | 97.3% | 94.5% |
| 3947959 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.59 | 46.0 | 3.59e-01 | 100.0% | 71.0% |
| 4954815 | 2004.1.1.96 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RsgA_GTPase | 0.59 | 44.0 | 2.71e-01 | 86.5% | 55.0% |
| 1322862 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.58 | 46.0 | 4.40e-01 | 100.0% | 97.9% |
| 1820980 | 79.1.1.2 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Hyaluronidase_1 | 0.57 | 45.0 | 2.96e-01 | 100.0% | 17.9% |
| 3839366 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.57 | 44.0 | 3.52e-01 | 89.2% | 75.6% |
| 4386290 | 4002.1.1.4 ↗ | alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › DHQS_C | 0.55 | 39.0 | 2.63e-01 | 89.2% | 57.5% |
| 4019781 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 38.0 | 2.46e-01 | 100.0% | 29.6% |
| 4932734 | 4959.1.1.1 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 | 0.51 | 36.0 | 2.65e-01 | 81.1% | 52.8% |