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KF301602.1__AGS80949.1__X__00064
Bact-VirKF301602.1__AGS80949.1__X__00064
Identity
- Accession:
- KF301602 ↗
- Kingdom:
- phage
Quality
68.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 211-280
D2
high
residues 306-380
Domain cluster:
representative
CATH (60)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 51.0 | 5.56e-01 | 80.0% | 74.6% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 50.0 | 5.86e-01 | 78.7% | 90.4% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 47.0 | 5.08e-01 | 78.7% | 71.9% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.77 | 44.0 | 5.41e-01 | 74.7% | 93.5% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 47.0 | 4.85e-01 | 80.0% | 64.4% |
| 2as9B01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.75 | 51.0 | 4.63e-01 | 70.7% | 79.2% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 46.0 | 5.48e-01 | 76.0% | 92.2% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 45.0 | 4.73e-01 | 80.0% | 66.7% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 45.0 | 5.37e-01 | 78.7% | 92.0% |
| 1wczA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.74 | 53.0 | 4.58e-01 | 74.7% | 81.7% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.74 | 44.0 | 5.14e-01 | 74.7% | 84.6% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 48.0 | 4.40e-01 | 80.0% | 52.1% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 46.0 | 5.25e-01 | 80.0% | 85.7% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 44.0 | 5.25e-01 | 77.3% | 90.2% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 45.0 | 4.65e-01 | 78.7% | 66.2% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 47.0 | 5.20e-01 | 78.7% | 84.7% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 46.0 | 4.50e-01 | 80.0% | 61.4% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 45.0 | 4.69e-01 | 80.0% | 72.1% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 41.0 | 5.06e-01 | 72.0% | 95.7% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.69 | 49.0 | 4.34e-01 | 74.7% | 82.6% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 46.0 | 5.16e-01 | 80.0% | 89.5% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 45.0 | 4.91e-01 | 80.0% | 82.3% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 45.0 | 4.88e-01 | 80.0% | 81.0% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.68 | 55.0 | 4.08e-01 | 86.7% | 37.8% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 46.0 | 4.56e-01 | 80.0% | 67.5% |
| 2gs5A01 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.67 | 50.0 | 3.66e-01 | 78.7% | 71.8% |
| 3frnA03 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 43.0 | 5.03e-01 | 85.3% | 98.0% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.66 | 54.0 | 3.93e-01 | 90.7% | 32.7% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 40.0 | 4.78e-01 | 73.3% | 93.9% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.65 | 43.0 | 4.22e-01 | 82.7% | 63.7% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.64 | 52.0 | 4.70e-01 | 86.7% | 86.0% |
| 4b9dB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 44.0 | 4.12e-01 | 72.0% | 86.0% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.64 | 50.0 | 4.49e-01 | 86.7% | 66.0% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.62 | 44.0 | 4.61e-01 | 78.7% | 82.1% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 48.0 | 3.86e-01 | 86.7% | 48.4% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 43.0 | 4.26e-01 | 77.3% | 69.6% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.61 | 50.0 | 3.74e-01 | 90.7% | 91.4% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 41.0 | 4.57e-01 | 74.7% | 89.8% |
| 3teeA02 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 45.0 | 4.61e-01 | 90.7% | 82.2% |
| 2i9yA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 48.0 | 3.75e-01 | 85.3% | 72.0% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 42.0 | 4.48e-01 | 76.0% | 84.4% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.60 | 40.0 | 4.31e-01 | 81.3% | 85.0% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 49.0 | 3.89e-01 | 92.0% | 64.6% |
| 3ml4C01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 44.0 | 3.93e-01 | 80.0% | 75.0% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.59 | 51.0 | 3.65e-01 | 96.0% | 91.8% |
| 1dzkA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 47.0 | 3.89e-01 | 92.0% | 65.5% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.59 | 44.0 | 4.19e-01 | 86.7% | 68.2% |
| 2gumB03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.58 | 48.0 | 4.16e-01 | 92.0% | 100.0% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 47.0 | 3.85e-01 | 90.7% | 60.3% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 40.0 | 4.23e-01 | 74.7% | 83.6% |
| 5cemA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 44.0 | 4.45e-01 | 84.0% | 100.0% |
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 37.0 | 4.19e-01 | 72.0% | 88.1% |
| 2m47A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 46.0 | 3.60e-01 | 92.0% | 60.7% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 35.0 | 3.69e-01 | 78.7% | 73.8% |
| 4uy9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 38.0 | 3.63e-01 | 73.3% | 92.2% |
| 4xr7E01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 47.0 | 3.16e-01 | 100.0% | 41.2% |
| 1jqpA01 | 2.40.128.80 | Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain | 0.53 | 42.0 | 3.79e-01 | 90.7% | 94.6% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 38.0 | 3.71e-01 | 77.3% | 91.7% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 40.0 | 3.40e-01 | 92.0% | 48.1% |
| 2ablA02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 35.0 | 3.27e-01 | 88.0% | 54.6% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3275404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 51.0 | 5.71e-01 | 78.7% | 76.7% |
| 3914746 | 4.1.1.128 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_4 | 0.83 | 51.0 | 5.35e-01 | 80.0% | 67.1% |
| 3510526 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 52.0 | 6.05e-01 | 78.7% | 89.1% |
| 3520312 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 56.0 | 5.34e-01 | 81.3% | 63.5% |
| 3765274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 52.0 | 4.83e-01 | 78.7% | 55.6% |
| 3570399 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 53.0 | 5.64e-01 | 81.3% | 80.0% |
| 4011604 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.78 | 51.0 | 5.19e-01 | 78.7% | 68.0% |
| 3218198 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 48.0 | 5.54e-01 | 80.0% | 85.5% |
| 3586487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 48.0 | 4.63e-01 | 80.0% | 55.3% |
| 5025079 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 46.0 | 5.23e-01 | 80.0% | 81.8% |
| 3913334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 48.0 | 5.00e-01 | 78.7% | 68.6% |
| 4000280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 47.0 | 5.42e-01 | 80.0% | 85.5% |
| 3576128 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 51.0 | 4.36e-01 | 80.0% | 45.2% |
| 3671986 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.76 | 47.0 | 4.86e-01 | 80.0% | 67.1% |
| 3881119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.75 | 47.0 | 4.65e-01 | 80.0% | 60.0% |
| 1108894 | 4.1.1.122 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_17 | 0.75 | 48.0 | 5.60e-01 | 78.7% | 90.7% |
| 3651961 | 4.1.1.251 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 | 0.75 | 46.0 | 5.33e-01 | 78.7% | 85.5% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.75 | 47.0 | 4.42e-01 | 80.0% | 53.3% |
| 3517728 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.74 | 47.0 | 4.85e-01 | 78.7% | 68.6% |
| 3840679 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 47.0 | 4.28e-01 | 80.0% | 50.5% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 47.0 | 4.37e-01 | 80.0% | 53.3% |
| 3795223 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 44.0 | 4.28e-01 | 76.0% | 52.9% |
| 4002896 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 47.0 | 4.37e-01 | 80.0% | 53.3% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 49.0 | 4.69e-01 | 78.7% | 60.0% |
| 3830187 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 46.0 | 5.36e-01 | 80.0% | 87.3% |
| 3721794 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 44.0 | 4.96e-01 | 76.0% | 76.7% |
| 3169607 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.74 | 46.0 | 4.60e-01 | 78.7% | 62.7% |
| 3592525 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 55.0 | 4.78e-01 | 78.7% | 64.5% |
| 3579591 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.73 | 48.0 | 5.51e-01 | 78.7% | 90.9% |
| 4357819 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.73 | 45.0 | 4.70e-01 | 78.7% | 67.1% |
| 3535278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 46.0 | 5.06e-01 | 78.7% | 80.0% |
| 3398093 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.73 | 46.0 | 5.07e-01 | 80.0% | 80.0% |
| 3617355 | 4.1.1.348 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor, SMN_YG-box | 0.73 | 47.0 | 4.35e-01 | 78.7% | 52.6% |
| 4002679 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.73 | 47.0 | 3.98e-01 | 80.0% | 41.7% |
| 4105328 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.73 | 47.0 | 5.07e-01 | 78.7% | 76.9% |
| 3883159 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 46.0 | 4.28e-01 | 80.0% | 53.3% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.72 | 47.0 | 5.06e-01 | 80.0% | 76.9% |
| 4420173 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.72 | 47.0 | 4.74e-01 | 78.7% | 66.7% |
| 3910433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 46.0 | 4.94e-01 | 78.7% | 75.4% |
| 3525406 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.72 | 47.0 | 4.07e-01 | 78.7% | 45.5% |
| 3999725 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 47.0 | 4.51e-01 | 80.0% | 58.8% |
| 3405627 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 46.0 | 4.26e-01 | 78.7% | 51.6% |
| 3841414 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.72 | 49.0 | 5.09e-01 | 78.7% | 75.7% |
| 3609629 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 47.0 | 4.30e-01 | 80.0% | 52.6% |
| 3275615 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.71 | 50.0 | 4.13e-01 | 78.7% | 42.6% |
| 3740753 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.71 | 44.0 | 4.74e-01 | 80.0% | 72.3% |
| 3881124 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 45.0 | 4.19e-01 | 80.0% | 53.3% |
| 3845425 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 46.0 | 4.31e-01 | 78.7% | 55.6% |
| 3820065 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 45.0 | 5.19e-01 | 80.0% | 89.1% |
| 4629022 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.70 | 44.0 | 4.61e-01 | 78.7% | 68.6% |
| 4524466 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 46.0 | 4.74e-01 | 80.0% | 71.4% |
| 3712782 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 46.0 | 4.49e-01 | 78.7% | 62.5% |
| 3263467 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.70 | 56.0 | 5.48e-01 | 85.3% | 83.7% |
| 3356605 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.69 | 52.0 | 4.91e-01 | 80.0% | 81.1% |
| 3520654 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.69 | 46.0 | 3.59e-01 | 80.0% | 34.0% |
| 3342814 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.69 | 50.0 | 4.65e-01 | 78.7% | 61.1% |
| 3244497 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.68 | 44.0 | 3.49e-01 | 80.0% | 33.3% |
| 3923813 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 50.0 | 5.34e-01 | 80.0% | 89.2% |
| 3511277 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 49.0 | 4.85e-01 | 80.0% | 72.5% |
| 3241890 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 49.0 | 4.44e-01 | 81.3% | 58.0% |
| 4010883 | 331.3.1.10 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL | 0.67 | 46.0 | 3.60e-01 | 73.3% | 80.6% |
| 3357709 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.67 | 50.0 | 4.85e-01 | 80.0% | 76.5% |
| 3576940 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 49.0 | 3.47e-01 | 78.7% | 28.9% |
| 2726885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 50.0 | 4.28e-01 | 78.7% | 69.0% |
| 4574546 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.66 | 46.0 | 4.92e-01 | 80.0% | 83.1% |
| 3619619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 45.0 | 4.69e-01 | 80.0% | 75.7% |
| 3630782 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.65 | 49.0 | 3.86e-01 | 78.7% | 42.8% |
| 5006274 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.64 | 43.0 | 3.47e-01 | 78.7% | 36.4% |
| 1833882 | 9.4.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › Pab87_oct | 0.64 | 52.0 | 4.82e-01 | 86.7% | 92.5% |
| 3839929 | 3174.2.1.1 ↗ | beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › ChapFlgA | 0.63 | 46.0 | 5.01e-01 | 81.3% | 92.1% |
| 3970890 | 3174.2.1.1 ↗ | beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › ChapFlgA | 0.63 | 46.0 | 5.04e-01 | 81.3% | 95.0% |
| 3224530 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 52.0 | 3.97e-01 | 97.3% | 75.5% |
| 3290160 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.62 | 45.0 | 4.39e-01 | 80.0% | 70.0% |
| 490 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.62 | 44.0 | 4.44e-01 | 78.7% | 74.3% |
| 3626756 | 9.1.1.48 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_10 | 0.62 | 52.0 | 3.93e-01 | 97.3% | 74.6% |
| 4958339 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.62 | 42.0 | 3.69e-01 | 78.7% | 47.3% |
| 5077969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 42.0 | 4.18e-01 | 78.7% | 67.5% |
| 4940673 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 40.0 | 4.43e-01 | 78.7% | 85.0% |
| 3393319 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 51.0 | 4.45e-01 | 90.7% | 62.7% |
| 4625654 | 4.1.1.445 ↗ | beta barrels › SH3 › SH3 › SH3 › Spore_GerQ | 0.61 | 45.0 | 4.51e-01 | 78.7% | 77.3% |
| 4282868 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.60 | 44.0 | 4.57e-01 | 78.7% | 81.4% |
| 4942017 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.60 | 45.0 | 3.94e-01 | 81.3% | 83.5% |
| 3512363 | 3794.1.1.1 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › PCC_BT | 0.59 | 48.0 | 3.94e-01 | 90.7% | 60.0% |
| 4989491 | 3174.2.1.0 ↗ | beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA | 0.59 | 45.0 | 4.62e-01 | 81.3% | 94.3% |
| 141833 | 9.11.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC | 0.58 | 44.0 | 4.26e-01 | 90.7% | 71.8% |
| 3580534 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 40.0 | 2.68e-01 | 72.0% | 42.9% |
| 4668044 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.52 | 42.0 | 3.58e-01 | 92.0% | 96.2% |
| 4283257 | 243.3.1.52 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › UPF0182 | 0.52 | 40.0 | 2.74e-01 | 89.3% | 29.7% |
D3
medium
residues 1-74
Domain cluster:
representative
CATH (77)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yuzB01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.96 | 78.0 | 6.09e-01 | 83.8% | 44.9% |
| 3pwfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.95 | 74.0 | 5.91e-01 | 81.1% | 46.6% |
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.94 | 75.0 | 5.76e-01 | 83.8% | 42.4% |
| 3rh3A01 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.94 | 81.0 | 6.44e-01 | 90.5% | 51.1% |
| 3t9jA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.92 | 77.0 | 5.91e-01 | 86.5% | 77.8% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.92 | 61.0 | 6.16e-01 | 71.6% | 68.0% |
| 4i1mB01 | 1.20.120.1700 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.92 | 73.0 | 5.92e-01 | 83.8% | 48.1% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.91 | 76.0 | 7.90e-01 | 87.8% | 95.7% |
| 1jgcA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.91 | 84.0 | 6.25e-01 | 95.9% | 70.6% |
| 2chpA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.91 | 76.0 | 5.85e-01 | 87.8% | 80.4% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.90 | 75.0 | 5.73e-01 | 86.5% | 79.2% |
| 1j30A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.90 | 78.0 | 6.03e-01 | 89.2% | 51.8% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.89 | 69.0 | 7.01e-01 | 81.1% | 86.3% |
| 3r2kA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.89 | 84.0 | 6.34e-01 | 98.6% | 76.0% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.89 | 75.0 | 6.95e-01 | 89.2% | 86.7% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.88 | 80.0 | 6.05e-01 | 95.9% | 81.6% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.88 | 73.0 | 6.71e-01 | 89.2% | 70.3% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.88 | 63.0 | 5.92e-01 | 75.7% | 63.2% |
| 1zs3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.87 | 74.0 | 5.42e-01 | 89.2% | 69.6% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.86 | 71.0 | 6.32e-01 | 87.8% | 65.7% |
| 3zc0D00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 65.0 | 4.69e-01 | 79.7% | 31.0% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.86 | 69.0 | 5.29e-01 | 86.5% | 41.3% |
| 2ntxA01 | 1.20.58.2010 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 1 | 0.86 | 79.0 | 5.55e-01 | 98.6% | 73.3% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.86 | 72.0 | 7.57e-01 | 89.2% | 98.5% |
| 3hiuD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.85 | 79.0 | 6.03e-01 | 97.3% | 79.6% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.85 | 69.0 | 6.15e-01 | 86.5% | 63.7% |
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.85 | 70.0 | 5.21e-01 | 87.8% | 37.6% |
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.85 | 74.0 | 6.85e-01 | 93.2% | 78.0% |
| 1lkoA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.85 | 76.0 | 5.97e-01 | 95.9% | 79.3% |
| 4gzrB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.85 | 72.0 | 7.12e-01 | 90.5% | 94.8% |
| 2vxxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.85 | 79.0 | 5.82e-01 | 98.6% | 73.3% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.84 | 58.0 | 5.22e-01 | 74.3% | 53.0% |
| 3kwoA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.84 | 76.0 | 5.82e-01 | 94.6% | 77.9% |
| 1nfvA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.84 | 79.0 | 5.86e-01 | 100.0% | 68.0% |
| 3qhbA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.84 | 78.0 | 5.70e-01 | 98.6% | 73.2% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.84 | 67.0 | 5.86e-01 | 87.8% | 58.3% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.84 | 74.0 | 6.25e-01 | 94.6% | 75.9% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.84 | 69.0 | 5.61e-01 | 89.2% | 51.9% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.84 | 63.0 | 4.91e-01 | 79.7% | 41.1% |
| 1kfdA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.83 | 66.0 | 6.80e-01 | 90.5% | 87.3% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.83 | 78.0 | 5.70e-01 | 98.6% | 72.6% |
| 1k04A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.83 | 70.0 | 6.17e-01 | 89.2% | 63.5% |
| 1s3qG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.83 | 75.0 | 5.71e-01 | 98.6% | 73.6% |
| 3unoE00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.83 | 73.0 | 5.52e-01 | 95.9% | 65.3% |
| 4cmyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.83 | 75.0 | 5.68e-01 | 98.6% | 74.2% |
| 3uo2B02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.82 | 70.0 | 6.69e-01 | 90.5% | 79.8% |
| 3e6sA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.82 | 73.0 | 5.61e-01 | 97.3% | 71.1% |
| 1cpqA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.82 | 58.0 | 4.76e-01 | 74.3% | 42.6% |
| 2rd0B00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.81 | 68.0 | 5.47e-01 | 90.5% | 54.0% |
| 1rv2D04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.81 | 67.0 | 6.90e-01 | 89.2% | 94.3% |
| 1vmgA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.80 | 58.0 | 5.62e-01 | 93.2% | 68.3% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.80 | 72.0 | 4.91e-01 | 94.6% | 46.8% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.79 | 62.0 | 5.30e-01 | 89.2% | 54.0% |
| 4qndA00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.79 | 65.0 | 5.83e-01 | 89.2% | 66.0% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.78 | 66.0 | 6.41e-01 | 89.2% | 82.5% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.78 | 73.0 | 6.00e-01 | 100.0% | 63.7% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.78 | 69.0 | 6.22e-01 | 98.6% | 100.0% |
| 1luwA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.78 | 62.0 | 6.54e-01 | 85.1% | 98.4% |
| 1e52A00 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.77 | 53.0 | 5.96e-01 | 70.3% | 96.4% |
| 4j05A00 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.77 | 69.0 | 4.21e-01 | 97.3% | 50.0% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.77 | 64.0 | 5.78e-01 | 90.5% | 72.0% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 67.0 | 5.58e-01 | 97.3% | 64.8% |
| 1yvwA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.76 | 62.0 | 5.73e-01 | 85.1% | 68.5% |
| 2bdeA03 | 1.20.58.1160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 60.0 | 5.99e-01 | 86.5% | 83.1% |
| 1rqgA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.76 | 61.0 | 4.79e-01 | 86.5% | 45.7% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.76 | 53.0 | 4.48e-01 | 73.0% | 46.3% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 59.0 | 5.96e-01 | 87.8% | 94.5% |
| 1f6fA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.74 | 64.0 | 4.71e-01 | 93.2% | 58.5% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 61.0 | 6.19e-01 | 91.9% | 97.2% |
| 1u8vB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.73 | 59.0 | 4.25e-01 | 89.2% | 34.7% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.73 | 57.0 | 5.87e-01 | 87.8% | 91.5% |
| 1w3bB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.72 | 42.0 | 2.64e-01 | 95.9% | 11.7% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.71 | 55.0 | 5.51e-01 | 85.1% | 90.8% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.71 | 56.0 | 5.41e-01 | 87.8% | 82.4% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.70 | 53.0 | 5.53e-01 | 82.4% | 95.6% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.69 | 54.0 | 5.37e-01 | 87.8% | 88.5% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.68 | 57.0 | 5.20e-01 | 93.2% | 83.8% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4972186 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.98 | 85.0 | 6.72e-01 | 89.2% | 50.8% |
| 5075803 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.97 | 84.0 | 6.60e-01 | 89.2% | 48.9% |
| 3829175 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.97 | 70.0 | 5.74e-01 | 74.3% | 45.8% |
| 5075122 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.97 | 84.0 | 6.66e-01 | 89.2% | 50.8% |
| 5078218 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.97 | 85.0 | 6.58e-01 | 90.5% | 58.6% |
| 4020586 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.97 | 83.0 | 6.74e-01 | 89.2% | 52.8% |
| 4979971 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.96 | 84.0 | 6.70e-01 | 90.5% | 52.3% |
| 3269590 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.96 | 82.0 | 6.86e-01 | 89.2% | 57.4% |
| 4963794 | 3755.4.1.90 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PspA_IM30 | 0.96 | 82.0 | 6.12e-01 | 89.2% | 41.2% |
| 3696922 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.96 | 84.0 | 6.34e-01 | 90.5% | 45.3% |
| 4956941 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.96 | 82.0 | 5.81e-01 | 89.2% | 34.7% |
| 4007316 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.95 | 82.0 | 6.17e-01 | 89.2% | 42.6% |
| 4948369 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.95 | 83.0 | 6.50e-01 | 90.5% | 49.3% |
| 3576866 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.95 | 83.0 | 5.93e-01 | 90.5% | 36.8% |
| 3821843 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.95 | 83.0 | 6.24e-01 | 90.5% | 43.9% |
| 4957516 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.95 | 75.0 | 6.13e-01 | 82.4% | 49.2% |
| 4514034 | 5039.1.1.2 ↗ | alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › DUF420 | 0.95 | 78.0 | 5.70e-01 | 85.1% | 37.1% |
| 3694558 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.95 | 82.0 | 6.08e-01 | 90.5% | 41.2% |
| 4945785 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.95 | 83.0 | 5.98e-01 | 90.5% | 38.9% |
| 5018814 | 3755.3.1.633 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PspA_IM30 | 0.94 | 81.0 | 5.70e-01 | 89.2% | 33.8% |
| 3703438 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.94 | 81.0 | 6.14e-01 | 89.2% | 44.0% |
| 5078892 | 604.5.1.1 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div | 0.94 | 79.0 | 5.45e-01 | 87.8% | 31.6% |
| 3504805 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.94 | 80.0 | 6.27e-01 | 89.2% | 47.1% |
| 3600184 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.94 | 80.0 | 6.26e-01 | 89.2% | 47.1% |
| 4996373 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.94 | 80.0 | 6.05e-01 | 89.2% | 42.6% |
| 3875941 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.94 | 81.0 | 6.01e-01 | 90.5% | 41.2% |
| 3682641 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.94 | 80.0 | 5.81e-01 | 89.2% | 37.7% |
| 3560750 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.93 | 73.0 | 7.50e-01 | 81.1% | 85.7% |
| 4426045 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.93 | 81.0 | 6.24e-01 | 90.5% | 46.9% |
| 3638867 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.93 | 81.0 | 6.16e-01 | 90.5% | 45.3% |
| 3960197 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.93 | 81.0 | 5.55e-01 | 90.5% | 31.6% |
| 3410968 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.93 | 74.0 | 7.62e-01 | 82.4% | 87.1% |
| 4618805 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.93 | 67.0 | 7.72e-01 | 75.7% | 100.0% |
| 3491873 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.93 | 79.0 | 7.16e-01 | 89.2% | 69.5% |
| 3292425 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.93 | 78.0 | 5.43e-01 | 87.8% | 31.7% |
| 5047335 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.93 | 80.0 | 6.19e-01 | 90.5% | 46.9% |
| 3753240 | 3291.1.1.54 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › CC2D1A-B_DM14 | 0.93 | 74.0 | 5.40e-01 | 82.4% | 36.5% |
| 4520774 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.93 | 79.0 | 5.47e-01 | 89.2% | 31.4% |
| 4974450 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.93 | 80.0 | 5.84e-01 | 90.5% | 38.9% |
| 3425296 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.93 | 80.0 | 6.35e-01 | 90.5% | 50.4% |
| 4477580 | 5086.1.1.118 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › BBS2_hp | 0.92 | 80.0 | 7.56e-01 | 90.5% | 80.0% |
| 4082967 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.92 | 81.0 | 6.79e-01 | 91.9% | 60.0% |
| 4942288 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.92 | 77.0 | 6.82e-01 | 87.8% | 66.0% |
| 4962838 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.91 | 78.0 | 5.36e-01 | 89.2% | 30.7% |
| 5031890 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.91 | 79.0 | 5.27e-01 | 90.5% | 27.8% |
| 3166880 | 906.1.1.0 ↗ | few secondary structure elements › CCCH zinc finger › CCCH zinc finger › CCCH zinc finger | 0.91 | 77.0 | 7.95e-01 | 89.2% | 94.3% |
| 4936574 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.91 | 74.0 | 5.60e-01 | 83.8% | 41.3% |
| 3599226 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.91 | 78.0 | 5.88e-01 | 90.5% | 42.5% |
| 3472708 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.91 | 67.0 | 4.80e-01 | 77.0% | 30.0% |
| 3781506 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.91 | 77.0 | 5.83e-01 | 89.2% | 42.6% |
| 3988387 | 604.10.1.1 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PTS_IIA | 0.91 | 80.0 | 7.13e-01 | 95.9% | 69.0% |
| 4386662 | 3291.1.1.158 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Seryl_tRNA_N | 0.91 | 79.0 | 6.66e-01 | 91.9% | 60.0% |
| 3940514 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.91 | 77.0 | 5.89e-01 | 89.2% | 44.0% |
| 4809272 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.90 | 75.0 | 6.24e-01 | 87.8% | 53.7% |
| 4993041 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.90 | 74.0 | 7.21e-01 | 85.1% | 78.8% |
| 4106385 | 3291.1.1.89 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › CHD5 | 0.90 | 76.0 | 6.79e-01 | 89.2% | 66.0% |
| 5058990 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.90 | 76.0 | 6.28e-01 | 89.2% | 53.7% |
| 5005597 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.90 | 75.0 | 5.98e-01 | 87.8% | 48.9% |
| 3172442 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.90 | 81.0 | 5.77e-01 | 94.6% | 45.3% |
| 3336677 | 605.1.1.132 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF641 | 0.90 | 70.0 | 6.98e-01 | 81.1% | 80.0% |
| 4514051 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.90 | 77.0 | 6.49e-01 | 90.5% | 60.0% |
| 3600017 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.90 | 77.0 | 6.48e-01 | 90.5% | 59.1% |
| 4874836 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.89 | 73.0 | 6.52e-01 | 86.5% | 64.6% |
| 4988301 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.89 | 74.0 | 5.70e-01 | 87.8% | 45.3% |
| 3738041 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.89 | 80.0 | 7.54e-01 | 94.6% | 92.9% |
| 4021739 | 192.10.1.7 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › HisKA | 0.88 | 74.0 | 7.23e-01 | 89.2% | 82.5% |
| 5043157 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.88 | 69.0 | 5.83e-01 | 82.4% | 67.0% |
| 4981470 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.87 | 81.0 | 6.05e-01 | 98.6% | 77.6% |
| 3868214 | 109.4.1.1302 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30363 | 0.87 | 81.0 | 6.15e-01 | 100.0% | 73.1% |
| 4873188 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.87 | 74.0 | 5.42e-01 | 89.2% | 39.1% |
| 4947161 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.87 | 77.0 | 5.99e-01 | 93.2% | 82.8% |
| 367569 | 150.1.1.7 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF892 | 0.86 | 79.0 | 6.12e-01 | 95.9% | 76.4% |
| 4602052 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.86 | 74.0 | 6.13e-01 | 90.5% | 59.2% |
| 4862474 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.85 | 72.0 | 5.71e-01 | 90.5% | 47.9% |
| 4944918 | 150.1.1.208 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › RUBY_RBDX | 0.85 | 77.0 | 5.92e-01 | 95.9% | 82.0% |
| 3944931 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.84 | 78.0 | 7.22e-01 | 98.6% | 94.4% |
| 3568113 | 174.1.1.14 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › NKAIN | 0.84 | 75.0 | 6.23e-01 | 94.6% | 91.7% |
| 4489484 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.80 | 74.0 | 4.49e-01 | 98.6% | 20.5% |
| 3965106 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.79 | 62.0 | 6.25e-01 | 83.8% | 84.0% |
| 140767 | 632.8.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › DUF6853 | 0.78 | 73.0 | 6.00e-01 | 100.0% | 63.7% |
| 2750143 | 3758.1.1.1 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Bacillus_HBL | 0.71 | 59.0 | 4.40e-01 | 90.5% | 42.3% |
| 3697399 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.68 | 57.0 | 4.52e-01 | 94.6% | 44.4% |
D4
medium
residues 143-194
Domain cluster:
representative
CATH (75)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.93 | 84.0 | 6.29e-01 | 96.2% | 51.8% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.92 | 86.0 | 7.88e-01 | 100.0% | 81.5% |
| 3fd9A03 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.92 | 85.0 | 7.44e-01 | 98.1% | 89.0% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.91 | 84.0 | 7.04e-01 | 98.1% | 87.7% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.91 | 83.0 | 6.63e-01 | 98.1% | 63.2% |
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.91 | 74.0 | 5.64e-01 | 100.0% | 42.7% |
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.90 | 83.0 | 7.26e-01 | 100.0% | 73.0% |
| 2vkjA00 | 1.20.58.2030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.89 | 65.0 | 5.03e-01 | 100.0% | 37.7% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.89 | 83.0 | 7.01e-01 | 100.0% | 66.7% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.89 | 77.0 | 6.01e-01 | 92.3% | 53.9% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.89 | 82.0 | 7.79e-01 | 100.0% | 95.0% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.89 | 83.0 | 7.25e-01 | 100.0% | 84.9% |
| 1p49A02 | 1.10.287.550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.87 | 78.0 | 7.46e-01 | 98.1% | 93.2% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.87 | 81.0 | 5.16e-01 | 100.0% | 69.0% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.86 | 77.0 | 7.19e-01 | 98.1% | 90.6% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.86 | 77.0 | 6.67e-01 | 98.1% | 77.9% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.86 | 61.0 | 5.73e-01 | 75.0% | 67.7% |
| 2bdeA03 | 1.20.58.1160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.85 | 76.0 | 6.60e-01 | 98.1% | 70.1% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.84 | 76.0 | 4.62e-01 | 100.0% | 20.7% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.84 | 74.0 | 6.93e-01 | 98.1% | 87.5% |
| 6t0bc01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 74.0 | 6.41e-01 | 98.1% | 67.9% |
| 3t98B00 | 6.10.140.1350 | Special › Helix non-globular › Helix Hairpins › | 0.83 | 75.0 | 6.28e-01 | 100.0% | 62.8% |
| 1i4dA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.83 | 75.0 | 5.00e-01 | 100.0% | 30.3% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.81 | 73.0 | 6.83e-01 | 98.1% | 93.7% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.81 | 66.0 | 5.84e-01 | 96.2% | 62.2% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.81 | 70.0 | 5.40e-01 | 98.1% | 44.5% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 73.0 | 6.51e-01 | 100.0% | 71.2% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 71.0 | 5.65e-01 | 100.0% | 80.8% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.80 | 65.0 | 6.11e-01 | 90.4% | 100.0% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 69.0 | 6.35e-01 | 94.2% | 78.5% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.80 | 69.0 | 4.04e-01 | 98.1% | 14.6% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 74.0 | 6.01e-01 | 100.0% | 57.8% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 70.0 | 5.62e-01 | 100.0% | 88.2% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.80 | 68.0 | 5.02e-01 | 98.1% | 37.6% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.80 | 69.0 | 6.42e-01 | 100.0% | 97.0% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.80 | 70.0 | 6.73e-01 | 100.0% | 90.0% |
| 4mt4A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.79 | 70.0 | 4.06e-01 | 100.0% | 11.4% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.79 | 68.0 | 4.80e-01 | 98.1% | 41.6% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.77 | 67.0 | 6.09e-01 | 100.0% | 93.0% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 67.0 | 4.76e-01 | 98.1% | 68.8% |
| 1zoyD00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.77 | 67.0 | 5.42e-01 | 100.0% | 52.9% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.76 | 68.0 | 6.44e-01 | 100.0% | 93.4% |
| 1x04A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.76 | 67.0 | 4.48e-01 | 100.0% | 26.0% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.75 | 63.0 | 5.48e-01 | 94.2% | 93.8% |
| 4hwhE00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.75 | 63.0 | 5.39e-01 | 98.1% | 59.1% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.74 | 61.0 | 4.99e-01 | 98.1% | 60.4% |
| 3cbuA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.73 | 61.0 | 4.59e-01 | 96.2% | 49.3% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.73 | 61.0 | 5.72e-01 | 94.2% | 76.9% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 62.0 | 5.14e-01 | 100.0% | 59.6% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.73 | 63.0 | 4.03e-01 | 98.1% | 74.4% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.73 | 62.0 | 3.89e-01 | 98.1% | 19.3% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.73 | 62.0 | 4.48e-01 | 100.0% | 37.7% |
| 2clbA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 60.0 | 4.36e-01 | 98.1% | 75.5% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.72 | 61.0 | 4.97e-01 | 98.1% | 68.6% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.72 | 63.0 | 4.72e-01 | 100.0% | 39.1% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.72 | 59.0 | 4.18e-01 | 100.0% | 55.7% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.71 | 59.0 | 3.99e-01 | 96.2% | 29.9% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.71 | 58.0 | 5.15e-01 | 98.1% | 62.8% |
| 2gw1A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 61.0 | 3.66e-01 | 100.0% | 78.1% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.69 | 54.0 | 4.87e-01 | 86.5% | 100.0% |
| 3g80A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.69 | 58.0 | 5.31e-01 | 98.1% | 79.5% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.69 | 58.0 | 5.03e-01 | 98.1% | 76.5% |
| 2wdqD00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.69 | 59.0 | 4.77e-01 | 100.0% | 78.1% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.69 | 56.0 | 4.57e-01 | 100.0% | 48.2% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.67 | 53.0 | 4.12e-01 | 98.1% | 40.0% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 56.0 | 5.22e-01 | 94.2% | 81.5% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.66 | 54.0 | 4.08e-01 | 100.0% | 51.0% |
| 3k3oA02 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 60.0 | 5.01e-01 | 100.0% | 84.5% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 53.0 | 4.33e-01 | 100.0% | 76.8% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 54.0 | 5.47e-01 | 98.1% | 98.0% |
| 3s84A02 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.63 | 54.0 | 3.85e-01 | 96.2% | 36.3% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 51.0 | 4.69e-01 | 92.3% | 80.6% |
| 1dkqA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.60 | 50.0 | 3.88e-01 | 96.2% | 53.2% |
| 1ak2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 46.0 | 3.13e-01 | 94.2% | 85.5% |
| 2b1eA04 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.55 | 46.0 | 3.61e-01 | 100.0% | 54.3% |
ECOD (79)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4228184 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.96 | 90.0 | 6.90e-01 | 100.0% | 49.5% |
| 4274282 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.95 | 89.0 | 8.41e-01 | 100.0% | 86.7% |
| 5054446 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.95 | 89.0 | 6.25e-01 | 100.0% | 38.6% |
| 4084570 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.94 | 88.0 | 7.83e-01 | 100.0% | 77.1% |
| 4179648 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.94 | 87.0 | 8.07e-01 | 100.0% | 85.9% |
| 4494085 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.94 | 87.0 | 7.39e-01 | 100.0% | 67.5% |
| 4508314 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.94 | 88.0 | 8.17e-01 | 100.0% | 85.7% |
| 4395525 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.93 | 87.0 | 7.96e-01 | 100.0% | 83.1% |
| 3927159 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.93 | 88.0 | 6.17e-01 | 100.0% | 52.1% |
| 4083492 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.93 | 86.0 | 7.93e-01 | 100.0% | 83.1% |
| 4052416 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.93 | 87.0 | 7.33e-01 | 100.0% | 86.3% |
| 3305347 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.92 | 86.0 | 6.53e-01 | 100.0% | 49.1% |
| 3187917 | 192.15.1.3 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core | 0.92 | 86.0 | 5.80e-01 | 100.0% | 34.5% |
| 4667987 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.91 | 84.0 | 7.85e-01 | 100.0% | 84.1% |
| 5042312 | 375.1.9.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase | 0.91 | 85.0 | 6.56e-01 | 100.0% | 52.4% |
| 3974634 | 148.1.3.261 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small, AAA_lid_9 | 0.91 | 85.0 | 5.08e-01 | 100.0% | 16.8% |
| 4638458 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.90 | 84.0 | 7.72e-01 | 100.0% | 83.1% |
| 4085389 | 4207.1.2.29 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med4 | 0.90 | 85.0 | 5.91e-01 | 100.0% | 37.2% |
| 4169938 | 3684.1.1.44 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DAHL | 0.90 | 83.0 | 6.26e-01 | 100.0% | 47.0% |
| 4028552 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.90 | 85.0 | 5.26e-01 | 100.0% | 43.7% |
| 4451448 | 4207.1.1.114 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Med4 | 0.90 | 84.0 | 6.34e-01 | 100.0% | 52.7% |
| 3873670 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.90 | 83.0 | 5.61e-01 | 100.0% | 30.6% |
| 3167271 | 192.8.1.385 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Med11 | 0.90 | 83.0 | 7.07e-01 | 100.0% | 67.5% |
| 2636645 | 192.15.1.2 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r | 0.89 | 80.0 | 7.31e-01 | 98.1% | 80.6% |
| 3576432 | 5055.1.1.0 ↗ | extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel | 0.89 | 82.0 | 5.91e-01 | 98.1% | 46.2% |
| 4977416 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.89 | 77.0 | 4.83e-01 | 92.3% | 76.2% |
| 5057676 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.89 | 81.0 | 7.08e-01 | 100.0% | 73.3% |
| 3355246 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.88 | 81.0 | 6.90e-01 | 100.0% | 71.2% |
| 3806304 | 633.22.1.0 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) | 0.88 | 81.0 | 5.43e-01 | 100.0% | 41.7% |
| 3914846 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.88 | 82.0 | 5.79e-01 | 100.0% | 55.0% |
| 3520468 | 4207.1.1.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) | 0.87 | 81.0 | 6.27e-01 | 100.0% | 58.1% |
| 3320767 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.87 | 79.0 | 5.33e-01 | 100.0% | 41.7% |
| 3974898 | 601.4.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › TarH | 0.87 | 79.0 | 5.34e-01 | 100.0% | 85.1% |
| 3864955 | 633.22.1.6 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) › TMD0_ABC | 0.87 | 77.0 | 5.27e-01 | 98.1% | 31.2% |
| 3555461 | 150.1.1.100 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › TMD0_ABC | 0.87 | 77.0 | 5.04e-01 | 98.1% | 25.9% |
| 4961031 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.87 | 76.0 | 6.87e-01 | 98.1% | 72.9% |
| 3260684 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.86 | 75.0 | 7.39e-01 | 96.2% | 96.4% |
| 3941457 | 1203.1.2.3 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › YiaAB | 0.86 | 77.0 | 5.80e-01 | 100.0% | 45.0% |
| 4106620 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.86 | 76.0 | 6.70e-01 | 98.1% | 80.0% |
| 3861711 | 633.10.1.41 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › TMD0_ABC | 0.86 | 76.0 | 5.22e-01 | 98.1% | 31.2% |
| 3741603 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.85 | 76.0 | 5.68e-01 | 100.0% | 64.8% |
| 4153455 | 4177.1.1.9 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Snx8_BAR_dom | 0.85 | 80.0 | 5.02e-01 | 100.0% | 23.5% |
| 4359331 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.85 | 76.0 | 7.21e-01 | 98.1% | 95.0% |
| 3258119 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.85 | 77.0 | 4.89e-01 | 98.1% | 26.7% |
| 3845582 | 109.40.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C | 0.85 | 77.0 | 5.64e-01 | 100.0% | 59.2% |
| 3060781 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.85 | 76.0 | 5.43e-01 | 100.0% | 52.4% |
| 3772265 | 150.1.1.100 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › TMD0_ABC | 0.85 | 75.0 | 5.21e-01 | 98.1% | 33.1% |
| 4000037 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.84 | 77.0 | 7.34e-01 | 100.0% | 95.0% |
| 4961819 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.84 | 73.0 | 4.91e-01 | 98.1% | 26.8% |
| 3608194 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.83 | 76.0 | 4.91e-01 | 100.0% | 26.0% |
| 4680241 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.83 | 73.0 | 6.76e-01 | 98.1% | 93.8% |
| 3962352 | 192.29.1.146 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF2231 | 0.82 | 70.0 | 5.03e-01 | 98.1% | 35.3% |
| 4072081 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.80 | 70.0 | 4.61e-01 | 100.0% | 40.0% |
| 3473769 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.80 | 70.0 | 4.40e-01 | 98.1% | 20.8% |
| 3400767 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.79 | 69.0 | 4.19e-01 | 98.1% | 20.6% |
| 5074692 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.77 | 67.0 | 5.22e-01 | 100.0% | 57.4% |
| 3497418 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.77 | 66.0 | 5.38e-01 | 98.1% | 58.0% |
| 3506207 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.77 | 66.0 | 3.98e-01 | 98.1% | 14.2% |
| 3930836 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.77 | 67.0 | 5.16e-01 | 100.0% | 73.3% |
| 3500901 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.76 | 60.0 | 4.06e-01 | 98.1% | 24.2% |
| 3598538 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.76 | 58.0 | 5.47e-01 | 88.5% | 69.2% |
| 3968144 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.76 | 63.0 | 5.91e-01 | 98.1% | 75.4% |
| 4283243 | 2004.1.1.149 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SecA_DEAD | 0.75 | 68.0 | 4.04e-01 | 98.1% | 79.7% |
| 5060491 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.75 | 63.0 | 4.89e-01 | 98.1% | 45.0% |
| 4993210 | 3755.3.1.635 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PHA_synth_III_E | 0.74 | 65.0 | 4.46e-01 | 100.0% | 57.3% |
| 5018716 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.73 | 62.0 | 5.71e-01 | 100.0% | 77.1% |
| 3634125 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.73 | 64.0 | 6.10e-01 | 98.1% | 98.3% |
| 149872 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.71 | 60.0 | 5.36e-01 | 100.0% | 72.2% |
| 3605439 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.71 | 59.0 | 5.40e-01 | 96.2% | 74.3% |
| 3477418 | 4992.1.1.12 ↗ | extended segments › RelB-like › RelB-like › RelB-like › LIN9_C | 0.71 | 58.0 | 4.93e-01 | 98.1% | 56.8% |
| 3712669 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.70 | 61.0 | 4.47e-01 | 100.0% | 42.1% |
| 3822747 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 56.0 | 4.48e-01 | 90.4% | 52.0% |
| 5042955 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.67 | 53.0 | 3.09e-01 | 98.1% | 9.1% |
| 4870082 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.67 | 52.0 | 5.00e-01 | 96.2% | 74.2% |
| 3535346 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.67 | 55.0 | 3.27e-01 | 100.0% | 12.6% |
| 3513381 | 4082.1.1.0 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain | 0.67 | 54.0 | 5.12e-01 | 86.5% | 88.3% |
| 3184698 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.66 | 53.0 | 4.65e-01 | 98.1% | 56.7% |
| 3731064 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.66 | 52.0 | 4.32e-01 | 98.1% | 47.3% |
| 4665163 | 160.1.1.1 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_ab_C | 0.60 | 48.0 | 3.71e-01 | 98.1% | 62.9% |