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KF301602.1__AGS80974.1__X__00089
Bact-VirKF301602.1__AGS80974.1__X__00089
Identity
- Accession:
- KF301602 ↗
- Kingdom:
- phage
Quality
63.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-18_31-76
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kz7A01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.77 | 55.0 | 3.72e-01 | 75.4% | 58.0% |
| 2gw1A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 58.0 | 3.53e-01 | 82.5% | 22.5% |
| 1dbhA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.74 | 54.0 | 3.59e-01 | 77.2% | 61.1% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.72 | 56.0 | 5.12e-01 | 84.2% | 84.0% |
| 3kkbA00 | 1.20.120.880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain | 0.72 | 56.0 | 4.28e-01 | 84.2% | 51.6% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.71 | 65.0 | 6.38e-01 | 100.0% | 98.4% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.71 | 56.0 | 4.66e-01 | 86.0% | 68.0% |
| 3bulA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.70 | 52.0 | 4.54e-01 | 80.7% | 95.4% |
| 1qycA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.69 | 62.0 | 4.85e-01 | 100.0% | 82.5% |
| 1werA02 | 1.10.506.10 | Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 | 0.69 | 60.0 | 4.49e-01 | 100.0% | 91.9% |
| 2vkjA00 | 1.20.58.2030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 54.0 | 4.35e-01 | 84.2% | 45.3% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.69 | 62.0 | 4.55e-01 | 100.0% | 62.5% |
| 2lqgA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.68 | 59.0 | 4.52e-01 | 100.0% | 96.4% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 61.0 | 4.21e-01 | 100.0% | 86.1% |
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 54.0 | 4.67e-01 | 86.0% | 87.1% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 59.0 | 4.35e-01 | 98.2% | 60.0% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.67 | 52.0 | 3.87e-01 | 82.5% | 57.5% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.66 | 48.0 | 4.85e-01 | 78.9% | 89.5% |
| 2psmA00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.66 | 58.0 | 4.61e-01 | 100.0% | 65.0% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 59.0 | 4.43e-01 | 100.0% | 61.5% |
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.65 | 58.0 | 4.45e-01 | 96.5% | 55.7% |
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 53.0 | 4.14e-01 | 89.5% | 52.8% |
| 7k3zG01 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.65 | 57.0 | 3.79e-01 | 96.5% | 51.2% |
| 4w8pA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.65 | 49.0 | 3.77e-01 | 82.5% | 58.5% |
| 1wjtA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.63 | 49.0 | 4.10e-01 | 87.7% | 51.5% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.61 | 55.0 | 3.91e-01 | 96.5% | 48.7% |
| 2o36A01 | 1.20.1050.40 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › Endopeptidase. Chain P; domain 1 | 0.61 | 50.0 | 3.84e-01 | 89.5% | 63.3% |
| 4qicC01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.60 | 45.0 | 3.56e-01 | 82.5% | 48.8% |
| 4fxdA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.60 | 55.0 | 3.93e-01 | 100.0% | 77.8% |
| 4by6B00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.56 | 44.0 | 3.19e-01 | 87.7% | 33.7% |
| 3c2gA02 | 1.10.10.1630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sys-1 C-terminal domain-like | 0.55 | 43.0 | 4.13e-01 | 87.7% | 75.0% |
| 2a5yB01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.55 | 47.0 | 3.87e-01 | 100.0% | 75.2% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 46.0 | 3.76e-01 | 100.0% | 60.5% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 43.0 | 3.94e-01 | 100.0% | 67.1% |
| 3qqaA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 39.0 | 3.04e-01 | 87.7% | 56.0% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3925443 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.85 | 65.0 | 4.76e-01 | 80.7% | 65.0% |
| 3263930 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.80 | 59.0 | 3.90e-01 | 77.2% | 58.5% |
| 3621330 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.80 | 59.0 | 3.69e-01 | 77.2% | 47.5% |
| 3596500 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.80 | 60.0 | 3.85e-01 | 80.7% | 66.5% |
| 3866338 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.79 | 58.0 | 3.80e-01 | 77.2% | 53.6% |
| 3510771 | 610.4.1.0 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain | 0.73 | 60.0 | 4.86e-01 | 87.7% | 65.0% |
| 3216849 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.73 | 65.0 | 5.30e-01 | 100.0% | 86.7% |
| 4006612 | 639.2.1.1 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB | 0.72 | 66.0 | 5.69e-01 | 100.0% | 74.1% |
| 5034673 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.72 | 63.0 | 4.57e-01 | 96.5% | 66.7% |
| 4568335 | 3812.1.1.8 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › DUF5398 | 0.72 | 48.0 | 4.56e-01 | 70.2% | 94.2% |
| 4933335 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.72 | 55.0 | 4.91e-01 | 82.5% | 77.5% |
| 3773235 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.71 | 56.0 | 4.75e-01 | 84.2% | 68.9% |
| 3412565 | 109.59.1.19 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Vps16_N | 0.71 | 55.0 | 4.09e-01 | 84.2% | 52.1% |
| 3936927 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.71 | 50.0 | 4.00e-01 | 86.0% | 37.4% |
| 3948672 | 639.2.1.1 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB | 0.71 | 56.0 | 5.75e-01 | 86.0% | 100.0% |
| 3512636 | 3930.1.1.6 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › Dicer_PBD | 0.71 | 63.0 | 4.99e-01 | 100.0% | 71.3% |
| 3792916 | 639.2.1.0 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) | 0.70 | 61.0 | 5.48e-01 | 93.0% | 88.0% |
| 4962699 | 101.1.2.924 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7342 | 0.70 | 52.0 | 3.70e-01 | 89.5% | 27.3% |
| 3886430 | 150.3.1.8 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › EPO_TPO | 0.69 | 63.0 | 4.48e-01 | 100.0% | 56.2% |
| 3450834 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.67 | 53.0 | 4.50e-01 | 87.7% | 61.7% |
| 3299258 | 109.4.1.31 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MA3 | 0.66 | 50.0 | 3.55e-01 | 82.5% | 60.6% |
| 4357827 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.66 | 52.0 | 4.95e-01 | 100.0% | 72.5% |
| 5059077 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.65 | 59.0 | 4.23e-01 | 100.0% | 63.7% |
| 3473605 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.64 | 55.0 | 3.67e-01 | 100.0% | 71.5% |
| 4010412 | 639.2.1.0 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) | 0.63 | 52.0 | 5.30e-01 | 89.5% | 100.0% |
| 3584894 | 605.1.1.238 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › CNNM | 0.62 | 47.0 | 4.13e-01 | 100.0% | 53.3% |
| 4995419 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.62 | 53.0 | 4.74e-01 | 100.0% | 84.7% |
| 3597777 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 48.0 | 3.62e-01 | 87.7% | 73.3% |
| 3966057 | 4239.2.1.1 ↗ | alpha arrays › DNA polymerase III theta subunit-like › LasR-specific antiactivator (QslA) › LasR-specific antiactivator (QslA) › QslA | 0.59 | 51.0 | 4.38e-01 | 100.0% | 78.9% |
| 3987389 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 45.0 | 2.67e-01 | 93.0% | 35.0% |
| 3923908 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.56 | 43.0 | 2.75e-01 | 82.5% | 70.9% |
| 4375453 | 622.4.1.26 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA | 0.53 | 39.0 | 3.56e-01 | 98.2% | 58.7% |
| 3209563 | 5076.1.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier | 0.52 | 45.0 | 2.79e-01 | 94.7% | 77.8% |