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KF301602.1__AGS81111.1__X__00226

Bact-Vir

KF301602.1__AGS81111.1__X__00226

Identity

Accession:
KF301602 ↗
Kingdom:
phage

Quality

93.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-93
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.66 41.0 2.97e-01 72.5% 23.4%
6d92A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.62 50.0 3.43e-01 88.4% 25.8%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.60 39.0 4.07e-01 72.5% 73.0%
1rxxC01 3.75.10.10 Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A 0.60 50.0 3.23e-01 94.2% 33.6%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.59 45.0 3.27e-01 88.4% 27.4%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.58 50.0 4.00e-01 100.0% 63.4%
2o28A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 40.0 3.06e-01 72.5% 51.6%
1z4eA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 40.0 3.14e-01 72.5% 57.3%
4bgjA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 44.0 3.81e-01 87.0% 81.4%
1i12D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 40.0 3.12e-01 72.5% 58.0%
2dxqA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 40.0 3.14e-01 72.5% 55.1%
4g79A00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.57 49.0 4.04e-01 100.0% 84.3%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.57 37.0 3.36e-01 71.0% 46.1%
7jiuA03 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.57 39.0 3.11e-01 71.0% 57.4%
4ckmB00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.56 48.0 3.88e-01 100.0% 93.1%
3gxwC00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 42.0 3.77e-01 97.1% 57.0%
3i3gA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 38.0 3.06e-01 72.5% 56.6%
1xzpB00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.56 43.0 3.60e-01 87.0% 75.6%
2w59B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.73e-01 87.0% 81.6%
4u7aA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 44.0 2.81e-01 88.4% 22.2%
4lq0A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 39.0 3.18e-01 79.7% 78.9%
2jemA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.53 42.0 3.08e-01 92.8% 40.9%
1vmeB01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 43.0 3.05e-01 94.2% 93.2%
1bdgA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 40.0 3.16e-01 88.4% 36.0%
4lq0A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.53 40.0 3.28e-01 85.5% 59.0%
2jdcA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 36.0 2.90e-01 72.5% 50.3%
4g3wA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 43.0 3.54e-01 95.7% 54.0%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.52 36.0 3.72e-01 73.9% 79.4%
2jr1A01 3.30.160.510 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Histone-like nucleoid-structuring protein H-NS 0.51 34.0 3.51e-01 87.0% 73.4%
7uclA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 36.0 3.26e-01 76.8% 83.3%
2cy5A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 44.0 3.61e-01 98.6% 80.6%
1a87A01 3.30.1120.60 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin 0.50 40.0 3.64e-01 88.4% 78.4%
3f6gA02 3.30.160.340 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 39.0 4.07e-01 92.8% 100.0%
6vg3A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 37.0 3.42e-01 79.7% 87.8%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3945393 7089.1.1.2 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF5405 0.76 60.0 5.73e-01 95.7% 73.8%
5052575 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.69 55.0 4.08e-01 88.4% 33.9%
3774553 223.2.1.22 a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin 0.67 53.0 3.64e-01 88.4% 23.5%
4527322 223.2.1.18 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin_2 0.64 51.0 3.79e-01 88.4% 33.5%
3777334 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.64 41.0 3.14e-01 72.5% 28.3%
3808264 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.64 53.0 2.99e-01 91.3% 9.1%
3352682 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.64 41.0 4.14e-01 71.0% 64.3%
5027780 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.64 49.0 5.15e-01 85.5% 96.7%
3481722 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.63 47.0 4.06e-01 97.1% 52.4%
4015630 3257.1.1.0 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain 0.63 51.0 3.62e-01 94.2% 29.0%
3787221 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.63 52.0 3.70e-01 98.6% 29.4%
5009596 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.62 43.0 3.35e-01 72.5% 60.0%
3957641 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.62 43.0 4.75e-01 95.7% 92.7%
3193241 223.2.1.22 a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin 0.62 48.0 3.98e-01 87.0% 46.2%
4158830 220.1.1.19 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.62 44.0 3.65e-01 84.1% 40.8%
3788077 223.2.1.22 a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin 0.62 54.0 4.13e-01 100.0% 42.4%
3183690 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 45.0 3.57e-01 85.5% 36.7%
2607438 375.13.1.1 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt 0.61 49.0 4.85e-01 97.1% 84.0%
3593432 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 48.0 3.53e-01 88.4% 43.5%
3517268 223.2.1.25 a+b three layers › Profilin-like › profilin-like › profilin-like › Avl9 0.61 48.0 3.59e-01 88.4% 35.1%
3231135 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 44.0 3.79e-01 82.6% 48.2%
4377336 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.60 45.0 3.73e-01 87.0% 43.0%
5053329 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 50.0 4.28e-01 100.0% 55.8%
3803140 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 43.0 3.71e-01 84.1% 47.0%
4937492 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.59 41.0 3.19e-01 72.5% 60.7%
4934569 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.59 41.0 3.23e-01 72.5% 62.1%
3356898 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.59 47.0 3.80e-01 92.8% 82.0%
3315568 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.59 43.0 4.35e-01 88.4% 80.0%
3185511 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.59 50.0 4.31e-01 98.6% 74.3%
3410955 223.2.1.22 a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin 0.58 50.0 3.85e-01 100.0% 41.8%
3274239 330.1.1.18 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 0.58 47.0 4.07e-01 92.8% 64.3%
3992484 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 45.0 3.80e-01 85.5% 68.3%
3244742 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.58 45.0 2.99e-01 100.0% 20.3%
3781831 223.2.1.28 a+b three layers › Profilin-like › profilin-like › profilin-like › Afi1 0.58 45.0 3.44e-01 88.4% 43.3%
3272624 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.58 49.0 4.03e-01 97.1% 63.8%
4010765 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.57 41.0 3.51e-01 88.4% 43.2%
4030198 304.107.1.3 a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › TrmE_N 0.57 45.0 3.67e-01 88.4% 72.9%
3383629 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 44.0 3.63e-01 85.5% 57.0%
4144742 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.57 42.0 3.60e-01 88.4% 47.5%
4141464 4099.1.1.22 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-P 0.56 47.0 4.12e-01 97.1% 73.6%
3197622 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.56 48.0 4.22e-01 98.6% 76.2%
3242923 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 45.0 3.77e-01 92.8% 50.0%
4020185 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.55 46.0 3.89e-01 94.2% 71.7%
3211133 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 44.0 3.45e-01 91.3% 39.4%
3724970 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.55 48.0 4.13e-01 98.6% 70.9%
4307149 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.55 41.0 3.44e-01 88.4% 44.8%
4442902 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.55 41.0 3.52e-01 88.4% 46.4%
3206632 896.1.1.2 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 0.55 42.0 4.03e-01 87.0% 70.6%
3574358 220.1.1.18 beta barrels › PH domain-like › PH domain-like › PH domain-like › PTB 0.55 42.0 3.70e-01 84.1% 65.7%
3510095 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.55 46.0 4.07e-01 97.1% 75.2%
4969849 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.55 42.0 3.45e-01 92.8% 43.7%
3443786 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 44.0 4.36e-01 95.7% 96.0%
4502261 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.54 40.0 3.44e-01 88.4% 46.4%
3705745 221.13.1.0 a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.54 41.0 3.45e-01 85.5% 45.4%
3468117 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 42.0 3.20e-01 88.4% 33.9%
4929294 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.54 42.0 3.22e-01 88.4% 76.1%
5055184 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.54 42.0 4.08e-01 94.2% 95.3%
3438132 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 46.0 4.01e-01 97.1% 78.1%
3992660 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.53 45.0 3.92e-01 98.6% 81.8%
3912173 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.52 41.0 3.93e-01 85.5% 87.5%
3470391 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.52 42.0 2.72e-01 92.8% 37.1%
4539117 220.1.1.19 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.52 40.0 3.17e-01 85.5% 42.0%
5004462 3454.1.1.0 beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like 0.51 38.0 3.59e-01 84.1% 94.4%
5017696 2484.1.1.336 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4277 0.51 40.0 2.63e-01 98.6% 17.1%
1810786 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.51 39.0 3.91e-01 87.0% 83.8%
4981234 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.50 37.0 3.79e-01 81.2% 86.2%
3969782 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 35.0 2.63e-01 72.5% 28.9%
3321631 2.1.1.86 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_Dis3 0.50 41.0 3.72e-01 97.1% 85.0%