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KF301602.1__AGS81127.1__X__00242

Bact-Vir

KF301602.1__AGS81127.1__X__00242

Identity

Accession:
KF301602 ↗
Kingdom:
phage

Quality

89.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 35-102
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bhcA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.67 45.0 3.65e-01 75.0% 38.2%
1r26A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 56.0 4.67e-01 95.6% 90.3%
4a2bA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 51.0 4.57e-01 95.6% 63.2%
3zh5A00 2.40.128.710 Mainly Beta › Beta Barrel › Lipocalin › Surface-adhesin protein E 0.63 49.0 4.04e-01 86.8% 59.1%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.62 52.0 3.92e-01 94.1% 75.3%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.62 42.0 3.36e-01 77.9% 35.0%
2a4vA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 54.0 4.21e-01 100.0% 93.9%
2l6mA00 3.30.160.400 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 49.0 4.39e-01 92.6% 77.2%
3n4fA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 47.0 3.82e-01 83.8% 64.6%
2r4iA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 43.0 3.50e-01 75.0% 42.3%
4jhmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 47.0 4.01e-01 88.2% 90.6%
2i99A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.60 51.0 3.99e-01 97.1% 69.3%
1a6aB01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.59 41.0 3.80e-01 85.3% 56.2%
1f2uA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 46.0 3.58e-01 94.1% 38.9%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 48.0 3.68e-01 91.2% 40.0%
1di2A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 45.0 4.53e-01 85.3% 91.3%
2hzgB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 46.0 3.67e-01 88.2% 81.1%
4ifeA02 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.58 42.0 2.98e-01 85.3% 23.8%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 45.0 4.51e-01 86.8% 90.1%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 47.0 4.30e-01 94.1% 71.3%
1av4A03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.58 49.0 3.07e-01 100.0% 85.8%
1q1rA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.57 46.0 4.06e-01 85.3% 96.8%
5c2vB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 47.0 3.05e-01 95.6% 28.4%
3bjsA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 45.0 3.88e-01 91.2% 56.4%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 37.0 3.94e-01 77.9% 81.8%
2l6cA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 46.0 4.03e-01 91.2% 96.2%
3sjnA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 45.0 3.80e-01 89.7% 97.5%
1rm6B02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.56 47.0 4.17e-01 100.0% 78.5%
3htxA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 44.0 4.26e-01 88.2% 82.9%
6ro0D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 42.0 3.70e-01 85.3% 74.5%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.55 45.0 3.68e-01 94.1% 67.6%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 41.0 3.46e-01 80.9% 100.0%
1egjA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 39.0 3.46e-01 76.5% 73.3%
2n3gA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 44.0 4.37e-01 92.6% 87.5%
5cr4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 43.0 3.07e-01 91.2% 50.0%
3h3iA00 2.40.128.220 Mainly Beta › Beta Barrel › Lipocalin › 0.53 44.0 3.56e-01 94.1% 87.0%
1ye9A02 2.40.470.10 Mainly Beta › Beta Barrel › catalase hpii fold › catalase hpii domain 0.53 45.0 3.92e-01 100.0% 83.0%
3ff2A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 39.0 3.29e-01 79.4% 89.7%
3jyhA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 41.0 2.78e-01 91.2% 90.8%
4uuwA03 3.90.950.20 Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like 0.52 42.0 3.41e-01 95.6% 66.0%
4d8pB01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.51 42.0 3.73e-01 95.6% 61.8%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 41.0 3.63e-01 89.7% 90.4%
3fg2P03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.51 38.0 3.56e-01 94.1% 64.0%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.50 39.0 3.29e-01 91.2% 81.3%
6p3qA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 38.0 3.07e-01 88.2% 74.1%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3613756 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.73 52.0 3.32e-01 75.0% 17.2%
3716876 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.73 52.0 3.40e-01 75.0% 19.3%
3715315 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.72 51.0 3.35e-01 75.0% 19.2%
4106397 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 59.0 5.71e-01 92.6% 85.3%
3516025 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 48.0 4.15e-01 91.2% 48.6%
5031452 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.67 55.0 4.90e-01 89.7% 71.6%
3190674 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.66 56.0 5.15e-01 95.6% 91.1%
3786448 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.66 54.0 3.33e-01 88.2% 32.3%
3269253 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.66 44.0 3.75e-01 89.7% 41.7%
4012024 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.66 46.0 3.01e-01 75.0% 17.9%
3339476 897.1.1.1 a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.65 52.0 3.85e-01 88.2% 64.4%
3615430 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 56.0 4.95e-01 98.5% 99.0%
3592050 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 52.0 4.18e-01 89.7% 72.6%
4952370 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.64 55.0 4.22e-01 97.1% 56.1%
4948090 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 45.0 3.59e-01 82.4% 34.7%
3764790 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 44.0 3.96e-01 75.0% 67.4%
5057515 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.62 46.0 4.88e-01 77.9% 93.3%
3444419 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 53.0 4.72e-01 98.5% 89.0%
3877924 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.62 49.0 4.59e-01 88.2% 77.6%
3693121 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.61 42.0 3.55e-01 70.6% 43.6%
3718300 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 44.0 4.35e-01 91.2% 70.7%
5017154 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.60 51.0 4.01e-01 91.2% 83.7%
4927158 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 49.0 2.90e-01 88.2% 20.0%
3608988 241.4.1.0 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 0.60 44.0 3.92e-01 86.8% 55.8%
4020297 330.1.1.3 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer 0.59 49.0 4.16e-01 94.1% 81.7%
3934686 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 49.0 4.47e-01 95.6% 72.6%
3941070 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.59 44.0 2.84e-01 80.9% 32.9%
4946414 301.13.1.0 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.59 49.0 4.01e-01 91.2% 56.1%
3272089 3333.1.1.1 a+b two layers › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_B 0.59 42.0 3.17e-01 75.0% 56.4%
5037296 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 49.0 3.27e-01 95.6% 53.0%
3510700 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 51.0 4.50e-01 98.5% 93.0%
3433806 5.1.2.29 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF1668 0.58 50.0 3.41e-01 92.6% 39.6%
3278773 7579.1.1.23 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PAF-AH_p_II 0.58 45.0 2.93e-01 86.8% 89.0%
3862045 11.1.1.640 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.58 43.0 3.64e-01 79.4% 52.2%
3271265 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 46.0 3.82e-01 89.7% 49.2%
3663237 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 47.0 4.52e-01 91.2% 90.0%
4544858 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.58 39.0 2.37e-01 70.6% 21.6%
4331289 244.2.1.5 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Reductase_C 0.57 44.0 4.53e-01 82.4% 100.0%
5003221 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.57 50.0 4.22e-01 98.5% 79.1%
3281007 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 44.0 3.47e-01 91.2% 38.7%
3887954 10.1.1.72 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › CRLF3_C 0.57 46.0 3.41e-01 88.2% 70.7%
3710253 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 45.0 3.66e-01 89.7% 68.9%
3376998 225.1.1.7 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.56 42.0 2.78e-01 80.9% 33.8%
3989031 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.56 50.0 3.38e-01 100.0% 40.0%
4989855 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.56 40.0 2.74e-01 76.5% 75.6%
3300200 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 44.0 3.60e-01 89.7% 48.1%
3819892 7579.1.1.3 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.55 43.0 2.89e-01 88.2% 23.3%
3261530 7579.1.1.3 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.55 43.0 2.83e-01 88.2% 20.3%
3647612 225.1.1.7 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.55 41.0 2.76e-01 80.9% 34.3%
3906288 233.1.1.3 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_II_alpha 0.55 39.0 3.80e-01 91.2% 66.3%
None 0.55 43.0 2.99e-01 91.2% 25.1%
3938669 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.54 47.0 2.98e-01 97.1% 21.9%
3919639 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 43.0 3.32e-01 91.2% 36.5%
3992062 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 46.0 3.19e-01 97.1% 68.0%
3770608 11.1.1.640 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.54 40.0 3.38e-01 80.9% 50.0%
4275948 220.1.1.52 beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C 0.53 39.0 3.34e-01 80.9% 45.8%
3646351 7579.1.1.96 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9, Abhydrolase_1 0.53 43.0 2.89e-01 92.6% 92.8%
169779 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.52 39.0 3.29e-01 79.4% 89.7%
4963795 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 42.0 4.08e-01 89.7% 100.0%
None 0.52 44.0 2.95e-01 100.0% 54.3%
5048021 247.1.1.11 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.52 45.0 3.12e-01 98.5% 70.8%
5043415 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.51 43.0 3.69e-01 100.0% 84.2%
3995204 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.51 37.0 3.83e-01 83.8% 84.6%
3900823 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.50 44.0 2.89e-01 100.0% 42.6%