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KF356198.1__AGR48536.1__A4L_09__00009
Bact-VirKF356198.1__AGR48536.1__A4L_09__00009
Identity
- Accession:
- KF356198 ↗
- Kingdom:
- phage
Quality
77.6
mean pLDDT
Taxonomy
TaxID: 1357732
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-182
Domain cluster:
rep: OP172755.1__WAX11389.1__CB473P1_00102__00102__D3-159
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3u61D03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.56 | 23.0 | 3.02e-01 | 89.6% | 64.8% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 23.0 | 2.86e-01 | 88.4% | 63.6% |
| 2lsgA00 | 1.20.58.1280 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DNA repair protein Rev1, C-terminal domain | 0.51 | 25.0 | 3.20e-01 | 85.4% | 79.4% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5032171 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.87 | 46.0 | 6.40e-01 | 71.3% | 100.0% |
| 5071270 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.85 | 45.0 | 6.21e-01 | 72.0% | 100.0% |
| 3945776 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.85 | 48.0 | 6.28e-01 | 73.2% | 96.8% |
| 2543651 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.81 | 44.0 | 5.85e-01 | 71.3% | 97.8% |
| 5052345 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.78 | 44.0 | 5.75e-01 | 74.4% | 100.0% |
| 4370861 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.74 | 45.0 | 5.33e-01 | 74.4% | 89.1% |
| 5031072 | 876.1.1.9 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB | 0.72 | 51.0 | 5.43e-01 | 72.0% | 92.4% |
| 5032574 | 876.1.1.9 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB | 0.72 | 52.0 | 4.83e-01 | 74.4% | 80.0% |
| 3838650 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.65 | 45.0 | 4.21e-01 | 70.1% | 99.5% |
| 5073795 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.65 | 46.0 | 5.28e-01 | 73.8% | 98.4% |
| 4947338 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.64 | 47.0 | 4.49e-01 | 75.0% | 88.9% |
| 3839087 | 876.1.1.5 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ddrB-ParB | 0.63 | 46.0 | 4.88e-01 | 75.6% | 92.0% |
| 5069965 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.61 | 42.0 | 4.80e-01 | 73.8% | 91.2% |
| 5049804 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.61 | 48.0 | 5.15e-01 | 82.3% | 97.9% |
D2
high
residues 187-317
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wgwA00 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.63 | 42.0 | 4.65e-01 | 86.3% | 88.9% |
| 3sykA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 41.0 | 4.81e-01 | 83.2% | 100.0% |
| 4u04A02 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.60 | 47.0 | 3.92e-01 | 84.0% | 71.6% |
| 1ls1A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.59 | 39.0 | 4.51e-01 | 87.0% | 97.8% |
| 6cnzF00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.58 | 42.0 | 4.02e-01 | 76.3% | 85.4% |
| 2xqoA00 | 1.10.530.60 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.57 | 45.0 | 3.90e-01 | 85.5% | 75.2% |
| 4m5bA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.56 | 44.0 | 3.81e-01 | 85.5% | 66.8% |
| 1n5uA05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.55 | 37.0 | 3.91e-01 | 74.8% | 77.7% |
| 2de2A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 32.0 | 2.87e-01 | 90.8% | 37.6% |
| 2qwoB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.54 | 30.0 | 3.46e-01 | 90.8% | 75.0% |
| 2a0uB01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.53 | 38.0 | 3.59e-01 | 74.8% | 70.6% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 39.0 | 3.92e-01 | 79.4% | 86.4% |
| 1xg7A02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.51 | 35.0 | 3.47e-01 | 71.8% | 79.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4257500 | 161.1.1.1 ↗ | alpha complex topology › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA › SecA_SW | 0.72 | 39.0 | 3.41e-01 | 72.5% | 37.3% |
| 3629028 | 101.1.10.8 ↗ | alpha arrays › HTH › HTH › Cyclin-like › CDK5_activator | 0.63 | 43.0 | 4.13e-01 | 86.3% | 59.7% |