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KF381361.1__AGR47904.1__SmphiM12_272__00205
Bact-VirKF381361.1__AGR47904.1__SmphiM12_272__00205
Identity
- Accession:
- KF381361 ↗
- Kingdom:
- phage
Quality
91.9
mean pLDDT
Taxonomy
TaxID: 1357423
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-45
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ng6A02 | 1.10.10.410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.82 | 70.0 | 6.48e-01 | 100.0% | 87.7% |
| 3bjsA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.70 | 57.0 | 4.36e-01 | 100.0% | 41.9% |
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 59.0 | 5.30e-01 | 100.0% | 76.2% |
| 4jqfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 55.0 | 4.81e-01 | 100.0% | 83.6% |
| 4u7bA01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.67 | 55.0 | 5.32e-01 | 100.0% | 84.3% |
| 1rktA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 49.0 | 4.67e-01 | 86.0% | 77.4% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 50.0 | 4.87e-01 | 95.3% | 82.0% |
| 1t3qA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.63 | 50.0 | 4.28e-01 | 100.0% | 69.1% |
| 1ci4A00 | 1.10.150.40 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF | 0.63 | 53.0 | 4.32e-01 | 100.0% | 71.6% |
| 2blfB01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.62 | 49.0 | 4.54e-01 | 100.0% | 85.7% |
| 4etsA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 50.0 | 4.20e-01 | 100.0% | 66.7% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.59 | 46.0 | 3.70e-01 | 100.0% | 39.4% |
| 1e7uA05 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.59 | 48.0 | 3.15e-01 | 93.0% | 54.5% |
| 3umcD02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 43.0 | 3.82e-01 | 100.0% | 88.5% |
| 2hxoA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 42.0 | 3.18e-01 | 100.0% | 47.9% |
| 8ab6B02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.55 | 45.0 | 3.07e-01 | 97.7% | 76.2% |
| 4ggnB01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 38.0 | 3.54e-01 | 76.7% | 68.9% |
| 5ko4A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.54 | 42.0 | 3.41e-01 | 97.7% | 86.1% |
| 4akgA06 | 1.10.8.710 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Dynein motor, AAA1 domain, small subdomain | 0.54 | 41.0 | 3.38e-01 | 100.0% | 62.6% |
| 1bccB02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 40.0 | 2.86e-01 | 100.0% | 72.4% |
| 2fd5A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 40.0 | 3.93e-01 | 97.7% | 83.3% |
| 5gp9A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 40.0 | 3.93e-01 | 95.3% | 89.6% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4968998 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.82 | 71.0 | 6.40e-01 | 100.0% | 73.3% |
| 4954865 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.79 | 68.0 | 6.18e-01 | 100.0% | 78.3% |
| 4934193 | 2.21.1.5 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › PF27234 | 0.76 | 62.0 | 4.30e-01 | 100.0% | 31.2% |
| 4994576 | 101.35.1.36 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › PF27234 | 0.75 | 61.0 | 5.42e-01 | 100.0% | 75.4% |
| 5049282 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 61.0 | 5.09e-01 | 100.0% | 56.5% |
| 3593172 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 62.0 | 5.00e-01 | 100.0% | 71.8% |
| 3891461 | 101.1.2.606 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPC5_C | 0.71 | 59.0 | 4.86e-01 | 100.0% | 56.5% |
| 4993593 | 198.1.1.27 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › PF27234 | 0.71 | 58.0 | 4.92e-01 | 100.0% | 60.0% |
| 3240699 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.71 | 55.0 | 4.99e-01 | 100.0% | 70.0% |
| 3489856 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 59.0 | 4.92e-01 | 100.0% | 80.0% |
| 4994506 | 8001.1.1.3 ↗ | alpha arrays › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › PF27234 | 0.70 | 57.0 | 4.58e-01 | 100.0% | 52.6% |
| 3233004 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 58.0 | 5.59e-01 | 100.0% | 94.0% |
| 4932863 | 101.1.2.947 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27234 | 0.69 | 57.0 | 4.83e-01 | 100.0% | 61.3% |
| 3396390 | 101.1.2.303 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPC5 | 0.67 | 53.0 | 4.84e-01 | 97.7% | 72.3% |
| 3931083 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.66 | 53.0 | 5.19e-01 | 100.0% | 84.0% |
| 3937317 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.66 | 54.0 | 5.29e-01 | 100.0% | 86.0% |
| 4994794 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 56.0 | 4.77e-01 | 100.0% | 92.0% |
| 3488926 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 53.0 | 5.04e-01 | 100.0% | 83.6% |
| 3814136 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 53.0 | 4.98e-01 | 100.0% | 81.8% |
| 4678981 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 52.0 | 5.04e-01 | 97.7% | 84.0% |
| 3928087 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.63 | 51.0 | 4.58e-01 | 100.0% | 65.7% |
| 3334149 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 50.0 | 4.81e-01 | 100.0% | 87.3% |
| 3428283 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 52.0 | 4.80e-01 | 100.0% | 73.3% |
| 3948842 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 49.0 | 4.73e-01 | 100.0% | 87.3% |
| 3905981 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.62 | 49.0 | 3.63e-01 | 95.3% | 36.2% |
| None | — | 0.62 | 50.0 | 3.11e-01 | 100.0% | 23.7% | |
| 3730451 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 52.0 | 4.35e-01 | 100.0% | 75.0% |
| 5021354 | 101.1.2.619 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_33 | 0.60 | 49.0 | 4.47e-01 | 100.0% | 75.4% |
| 3620979 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 50.0 | 4.70e-01 | 97.7% | 90.9% |
| 4025053 | 101.1.2.166 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM6_C | 0.60 | 51.0 | 4.06e-01 | 100.0% | 84.2% |
| 3935045 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 49.0 | 4.35e-01 | 100.0% | 64.3% |
| 3933926 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 49.0 | 4.43e-01 | 100.0% | 75.4% |
| 5008720 | 101.1.1.548 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_32 | 0.58 | 46.0 | 4.20e-01 | 100.0% | 76.9% |
| 5003693 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 45.0 | 4.14e-01 | 100.0% | 78.5% |
| 5050917 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.57 | 39.0 | 3.27e-01 | 74.4% | 40.0% |
| 5064861 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.56 | 45.0 | 2.89e-01 | 100.0% | 64.1% |
| 3618386 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 46.0 | 4.55e-01 | 97.7% | 97.8% |
| 4014429 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.55 | 44.0 | 2.76e-01 | 100.0% | 14.6% |
| 4336243 | 3949.1.1.1 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › IPPT | 0.51 | 39.0 | 3.59e-01 | 95.3% | 69.2% |