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KF589919.1__AGW43785.1__phiRS7_0049__00049

Bact-Vir

KF589919.1__AGW43785.1__phiRS7_0049__00049

Identity

Accession:
KF589919 ↗
Kingdom:
phage

Quality

76.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-69
PDB
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 67.0 6.62e-01 95.5% 87.3%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 61.0 6.25e-01 94.0% 87.7%
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 66.0 6.80e-01 98.5% 100.0%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 66.0 6.43e-01 94.0% 94.4%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 61.0 6.61e-01 97.0% 100.0%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.77 64.0 6.61e-01 91.0% 98.4%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.76 62.0 6.60e-01 95.5% 100.0%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 66.0 6.48e-01 95.5% 87.5%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.74 65.0 5.00e-01 97.0% 67.8%
4bb7B00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.73 65.0 4.46e-01 100.0% 45.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 60.0 6.22e-01 98.5% 98.4%
4up7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 55.0 4.17e-01 82.1% 71.7%
3amuA02 2.40.50.1010 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 54.0 4.23e-01 80.6% 94.1%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 65.0 5.78e-01 100.0% 72.8%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.71 64.0 4.88e-01 100.0% 45.0%
4ft4B01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.70 64.0 4.86e-01 100.0% 95.3%
1m1fB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.70 59.0 5.04e-01 91.0% 81.9%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.70 63.0 4.83e-01 100.0% 71.5%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 53.0 4.20e-01 80.6% 81.5%
2w1zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 57.0 4.52e-01 92.5% 75.9%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 61.0 5.98e-01 100.0% 95.9%
1ne8A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.68 59.0 4.85e-01 94.0% 80.2%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.68 57.0 5.21e-01 95.5% 90.0%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 53.0 4.65e-01 89.6% 60.2%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.65 49.0 3.75e-01 80.6% 66.0%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.65 55.0 4.80e-01 100.0% 88.9%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 52.0 4.36e-01 91.0% 76.9%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.64 34.0 3.69e-01 73.1% 60.7%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 48.0 4.25e-01 98.5% 57.4%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 42.0 4.38e-01 83.6% 78.7%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.60 45.0 4.53e-01 77.6% 77.6%
3lltA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 50.0 4.46e-01 91.0% 86.0%
4c57B00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.60 46.0 3.00e-01 85.1% 30.8%
5a4eC00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.59 49.0 3.26e-01 91.0% 31.9%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.59 50.0 3.79e-01 97.0% 48.0%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.59 47.0 4.17e-01 91.0% 80.8%
2gtlM02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.58 52.0 3.89e-01 100.0% 74.7%
1v58A01 3.10.450.70 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal 0.58 43.0 4.21e-01 86.6% 71.8%
4jrnA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 48.0 3.94e-01 98.5% 78.7%
2pmlX01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 45.0 3.65e-01 83.6% 71.8%
4wsfA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 43.0 3.73e-01 82.1% 58.6%
5m07A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 46.0 4.19e-01 89.6% 90.1%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.57 45.0 2.91e-01 86.6% 26.1%
1vx4404 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 50.0 3.93e-01 100.0% 54.3%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 44.0 4.36e-01 94.0% 85.3%
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.55 46.0 3.53e-01 94.0% 75.5%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.55 44.0 3.81e-01 85.1% 83.2%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 44.0 3.72e-01 92.5% 99.2%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 44.0 3.51e-01 91.0% 71.1%
2obdA02 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.53 45.0 3.29e-01 95.5% 92.6%
6i4pA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 45.0 3.69e-01 95.5% 91.3%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.53 43.0 3.98e-01 91.0% 90.9%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.52 38.0 3.22e-01 82.1% 74.2%
2ivdB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 39.0 3.04e-01 85.1% 82.9%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 44.0 3.19e-01 98.5% 39.4%
5w17A01 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.51 38.0 3.11e-01 85.1% 88.7%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.50 43.0 3.87e-01 94.0% 84.8%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 42.0 3.36e-01 100.0% 86.6%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.50 43.0 2.92e-01 97.0% 31.8%
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.50 36.0 3.16e-01 77.6% 55.7%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3684567 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.81 64.0 6.52e-01 97.0% 86.2%
4964768 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 67.0 7.03e-01 95.5% 100.0%
4674170 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.80 71.0 5.72e-01 95.5% 60.8%
5024617 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.80 70.0 6.19e-01 95.5% 80.0%
4093836 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 67.0 7.05e-01 98.5% 100.0%
3488114 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 67.0 5.47e-01 100.0% 51.7%
3507146 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 65.0 5.97e-01 100.0% 70.6%
5026284 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.78 69.0 6.07e-01 95.5% 80.0%
4501723 4.8.1.45 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Peptidase_U57 0.78 60.0 6.58e-01 91.0% 100.0%
4063634 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.78 69.0 5.57e-01 97.0% 59.7%
4642857 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 67.0 6.30e-01 95.5% 93.8%
4949773 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.77 68.0 5.20e-01 100.0% 44.1%
3629536 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 66.0 5.81e-01 100.0% 65.3%
3185321 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.77 69.0 6.61e-01 97.0% 94.7%
4138935 4.1.1.241 beta barrels › SH3 › SH3 › SH3 › NifZ 0.77 67.0 6.46e-01 94.0% 98.7%
4952973 4.15.1.0 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like 0.76 66.0 5.96e-01 95.5% 88.9%
4049824 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 64.0 5.31e-01 100.0% 53.9%
3568329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 62.0 6.47e-01 94.0% 98.3%
4929262 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.75 69.0 5.15e-01 100.0% 45.2%
3612182 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 65.0 5.83e-01 94.0% 100.0%
3023952 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 62.0 5.17e-01 91.0% 95.6%
3188712 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.74 68.0 5.88e-01 100.0% 88.0%
3630782 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.73 67.0 5.12e-01 100.0% 89.7%
3176265 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.73 66.0 4.98e-01 100.0% 47.7%
3798312 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 62.0 6.18e-01 95.5% 91.4%
3392130 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.72 62.0 6.35e-01 97.0% 95.4%
3768347 4.1.1.230 beta barrels › SH3 › SH3 › SH3 › DUF7030 0.72 62.0 6.37e-01 94.0% 100.0%
3208838 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.72 65.0 4.94e-01 100.0% 67.1%
165654 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.72 62.0 6.04e-01 95.5% 89.2%
3540253 4.1.1.78 beta barrels › SH3 › SH3 › SH3 › TTD 0.72 65.0 5.79e-01 100.0% 75.8%
3701345 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 64.0 6.04e-01 97.0% 100.0%
3495447 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.72 62.0 5.11e-01 97.0% 53.3%
4250193 4.1.1.78 beta barrels › SH3 › SH3 › SH3 › TTD 0.72 65.0 5.88e-01 100.0% 78.9%
5017073 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.72 65.0 4.96e-01 100.0% 44.7%
3631731 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 65.0 4.93e-01 100.0% 69.3%
3511551 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 59.0 6.20e-01 92.5% 100.0%
3491615 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.71 62.0 4.18e-01 100.0% 26.0%
3549321 4.11.1.5 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24, PF31032 0.71 64.0 4.80e-01 100.0% 46.3%
4982354 4.7.1.0 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.71 60.0 6.11e-01 94.0% 96.9%
4027263 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.71 64.0 5.18e-01 98.5% 95.0%
5034832 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.78e-01 92.5% 97.1%
2832038 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.70 61.0 5.02e-01 94.0% 78.3%
3448327 4.1.1.150 beta barrels › SH3 › SH3 › SH3 › DUF3123 0.70 62.0 6.14e-01 98.5% 100.0%
3774692 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.70 60.0 5.69e-01 97.0% 86.3%
4026274 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 62.0 4.85e-01 100.0% 50.7%
3965064 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.69 62.0 5.01e-01 100.0% 76.0%
3923766 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 62.0 5.13e-01 100.0% 78.3%
3214474 4.1.1.390 beta barrels › SH3 › SH3 › SH3 › PF29855 0.68 60.0 5.21e-01 98.5% 65.0%
4023201 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.68 59.0 3.76e-01 95.5% 52.4%
3894729 4.1.1.461 beta barrels › SH3 › SH3 › SH3 › zf-CCCH 0.68 58.0 5.31e-01 95.5% 94.4%
3926179 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.99e-01 94.0% 98.5%
3210555 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.67 55.0 3.51e-01 92.5% 23.7%
3583597 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.03e-01 100.0% 67.8%
4114383 4.8.1.47 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › zf_CCCH_4 0.66 55.0 5.14e-01 92.5% 97.6%
5078358 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.66 46.0 3.75e-01 73.1% 56.3%
4530545 4.1.1.217 beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.65 56.0 5.00e-01 95.5% 88.4%
3913637 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.65 55.0 5.07e-01 97.0% 78.9%
2557227 4.7.1.2 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.65 56.0 5.43e-01 98.5% 88.3%
3659671 4.25.1.0 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.64 58.0 5.73e-01 100.0% 100.0%
4966131 4.1.3.1 beta barrels › SH3 › SH3 › Calcium-binding protein CcbP › Calci_bind_CcbP 0.63 54.0 4.63e-01 97.0% 62.7%
3727172 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 50.0 4.97e-01 89.6% 100.0%
4501781 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 53.0 4.70e-01 97.0% 93.0%
3974565 3794.1.2.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase 0.61 42.0 4.26e-01 82.1% 72.3%
3599298 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.61 50.0 3.23e-01 89.6% 28.3%
3239431 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.61 51.0 3.18e-01 91.0% 22.9%
4009391 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 45.0 4.33e-01 82.1% 82.5%
3845542 220.1.1.38 beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.60 47.0 4.22e-01 91.0% 85.0%
4243780 206.1.1.30 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kinase-like 0.59 47.0 3.00e-01 89.6% 29.9%
3898370 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 45.0 4.72e-01 83.6% 100.0%
7380 219.1.1.34 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C47 0.59 50.0 3.79e-01 97.0% 48.0%
3964608 220.1.1.104 beta barrels › PH domain-like › PH domain-like › PH domain-like › Cpta_toxin 0.59 44.0 4.43e-01 82.1% 82.9%
2772098 2.1.1.77 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_RpbG 0.59 43.0 3.68e-01 82.1% 92.6%
3496292 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 43.0 4.65e-01 79.1% 100.0%
3502436 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 49.0 3.77e-01 100.0% 73.1%
3926624 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.56 39.0 4.31e-01 92.5% 100.0%
3267872 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 47.0 3.82e-01 95.5% 53.1%
3285829 4.1.1.425 beta barrels › SH3 › SH3 › SH3 › RNHCP 0.55 42.0 3.73e-01 85.1% 54.3%
None 0.55 46.0 2.97e-01 97.0% 32.4%
3872625 11.1.1.787 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ITI_HC_C 0.55 40.0 2.78e-01 79.1% 98.7%
3543654 11.1.1.787 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ITI_HC_C 0.54 36.0 2.64e-01 70.1% 77.2%
5046173 4252.1.1.7 beta barrels › AttH-like › AttH-like › AttH-like › Tocopherol_cycl 0.54 41.0 3.34e-01 88.1% 89.7%
3745663 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.53 46.0 3.43e-01 98.5% 74.0%
4262684 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.53 45.0 3.41e-01 100.0% 80.0%
4989156 11.1.1.410 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BatD 0.53 42.0 3.57e-01 85.1% 90.5%
5043949 11.1.1.410 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BatD 0.52 41.0 3.49e-01 85.1% 88.2%
D2 high residues 81-153
PDB
D3 high residues 188-239
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11753.14 best DUF3310 54.8 1.20e-14 90.4% 78.3%
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1o9gA02 1.10.287.540 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.91 62.0 6.83e-01 71.2% 86.0%
7e4gA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.85 76.0 5.05e-01 100.0% 34.5%
4fxdA04 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.84 63.0 4.45e-01 80.8% 51.0%
2wb7A03 1.20.120.870 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain 0.81 73.0 5.32e-01 100.0% 75.0%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.79 58.0 4.85e-01 78.8% 81.1%
4wpeA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.77 55.0 3.44e-01 76.9% 16.4%
1yozA00 1.10.3200.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like 0.77 56.0 4.34e-01 78.8% 50.4%
2qg7B02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.75 67.0 4.23e-01 100.0% 98.1%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.75 53.0 4.96e-01 76.9% 61.2%
2y8nA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.74 52.0 2.85e-01 76.9% 4.5%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.73 52.0 4.67e-01 76.9% 53.3%
2ib0A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.72 67.0 4.79e-01 100.0% 88.9%
2aw6A02 1.25.40.400 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.72 60.0 3.90e-01 92.3% 34.8%
6xz3A01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.70 58.0 4.52e-01 94.2% 63.2%
8e9gJ01 1.20.120.1200 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ 0.70 58.0 4.20e-01 100.0% 35.9%
1luwA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.70 50.0 4.76e-01 78.8% 79.7%
3ecsC01 1.20.120.1070 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain 0.70 56.0 4.76e-01 100.0% 100.0%
2wvxA04 1.20.1610.10 Mainly Alpha › Up-down Bundle › Glycosyl hydrolase family fold › alpha-1,2-mannosidases domains 0.69 49.0 3.46e-01 76.9% 23.1%
3rh3A01 1.20.120.930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 0.69 51.0 3.87e-01 82.7% 54.1%
1nafA02 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 48.0 4.18e-01 76.9% 60.0%
2pmrA00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.67 49.0 4.41e-01 80.8% 64.5%
3zsuA00 1.20.120.290 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.64 50.0 4.03e-01 94.2% 55.1%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 49.0 3.61e-01 88.5% 74.5%
1cpqA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.62 50.0 3.95e-01 100.0% 62.8%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.61 47.0 4.05e-01 90.4% 73.6%
1zylA03 1.20.1270.170 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.61 48.0 3.93e-01 90.4% 95.1%
1x3kA01 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.60 48.0 3.64e-01 98.1% 57.1%
3n8hA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.59 49.0 4.43e-01 96.2% 90.8%
2rbdA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 45.0 3.43e-01 98.1% 83.3%
1elkA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 45.0 3.35e-01 96.2% 51.0%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.54 43.0 4.12e-01 98.1% 75.8%
7k3zG01 3.50.7.10 Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL 0.51 42.0 2.91e-01 100.0% 66.2%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3355429 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.92 68.0 6.21e-01 76.9% 67.7%
2142296 150.1.1.3 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin 0.91 67.0 5.26e-01 76.9% 44.9%
3477777 4177.1.1.12 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FAM92 0.89 65.0 4.08e-01 76.9% 19.1%
4942064 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.88 67.0 6.16e-01 80.8% 66.2%
3289740 605.1.1.4 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 0.87 65.0 6.17e-01 78.8% 75.0%
5043886 3755.3.1.637 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.87 59.0 4.02e-01 71.2% 100.0%
4949658 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.86 71.0 5.95e-01 86.5% 70.0%
3884649 192.5.1.1 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 0.84 60.0 4.90e-01 76.9% 61.1%
3180581 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.83 60.0 5.08e-01 76.9% 47.1%
3282049 605.4.1.0 alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein 0.82 70.0 6.74e-01 94.2% 88.3%
4958850 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.81 66.0 5.29e-01 86.5% 84.2%
3240810 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.81 72.0 5.22e-01 100.0% 87.9%
5034628 632.12.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Vng1086c-like › Vng1086c-like › UPF0058 0.80 74.0 5.88e-01 100.0% 75.5%
3600238 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 58.0 3.39e-01 76.9% 10.1%
3481125 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.78 56.0 4.04e-01 76.9% 30.3%
3497251 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.78 60.0 5.28e-01 86.5% 58.7%
3251835 601.1.1.6 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › TLN1-like_RS 0.77 67.0 4.79e-01 100.0% 93.5%
4119718 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.77 60.0 5.05e-01 86.5% 82.2%
3556027 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.76 54.0 4.66e-01 76.9% 96.5%
4509435 601.1.1.6 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › TLN1-like_RS 0.76 65.0 4.66e-01 100.0% 92.5%
3855461 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.76 54.0 4.65e-01 76.9% 96.5%
4023225 3924.1.1.0 alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.74 66.0 4.09e-01 100.0% 21.7%
3491418 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.73 52.0 4.68e-01 76.9% 53.3%
3240929 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.73 57.0 3.83e-01 90.4% 76.3%
3170506 4177.1.1.14 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_2 0.72 62.0 4.01e-01 100.0% 71.2%
4942288 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.70 51.0 4.18e-01 80.8% 63.0%
4306710 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.68 56.0 4.14e-01 100.0% 82.6%
4981741 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.67 52.0 5.02e-01 84.6% 78.3%
5040859 632.11.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DUF357 0.67 51.0 4.45e-01 86.5% 60.0%
3510771 610.4.1.0 alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain 0.67 56.0 4.58e-01 96.2% 86.0%
3740688 7076.1.1.0 0.67 48.0 4.38e-01 80.8% 57.3%
5061320 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.66 51.0 4.48e-01 86.5% 58.7%
3792916 639.2.1.0 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.66 57.0 5.09e-01 98.1% 73.3%
5012498 3843.1.1.28 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MbhD 0.66 55.0 5.23e-01 100.0% 89.2%
3286104 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.64 47.0 4.02e-01 86.5% 76.0%
4938440 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.63 49.0 4.19e-01 94.2% 78.0%