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KF614509.1__AHC30441.1__L338C_024__00024
Bact-VirKF614509.1__AHC30441.1__L338C_024__00024
Identity
- Accession:
- KF614509 ↗
- Kingdom:
- phage
Quality
60.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-44
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ng6A01 | 1.10.1510.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain | 0.74 | 63.0 | 4.76e-01 | 100.0% | 44.0% |
| 4csrA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.68 | 60.0 | 4.47e-01 | 100.0% | 43.2% |
| 8b9zK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 54.0 | 4.07e-01 | 94.4% | 36.3% |
| 2kivA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.67 | 46.0 | 3.87e-01 | 94.4% | 41.3% |
| 3bjnA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.67 | 53.0 | 3.44e-01 | 88.9% | 33.3% |
| 3tbiA00 | 1.10.10.2850 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phage late-transcription coactivator-like | 0.66 | 44.0 | 3.53e-01 | 72.2% | 35.2% |
| 7ce1A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 45.0 | 3.98e-01 | 75.0% | 51.9% |
| 1v32A00 | 1.10.245.10 | Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain | 0.63 | 47.0 | 3.62e-01 | 94.4% | 33.7% |
| 7jgsG02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 50.0 | 3.65e-01 | 91.7% | 37.8% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 49.0 | 3.72e-01 | 91.7% | 39.6% |
| 3u3gA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.62 | 47.0 | 3.17e-01 | 83.3% | 92.9% |
| 1is8A01 | 1.10.286.10 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain | 0.61 | 46.0 | 4.21e-01 | 100.0% | 63.3% |
| 1e0zA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.59 | 40.0 | 2.87e-01 | 72.2% | 21.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3947908 | 4275.1.1.1 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 | 0.97 | 88.0 | 6.39e-01 | 100.0% | 40.0% |
| 3640091 | 3291.1.1.17 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › DUF202 | 0.72 | 61.0 | 4.32e-01 | 97.2% | 84.5% |
| 3279224 | 101.32.1.1 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › Fer2_BFD | 0.71 | 53.0 | 4.76e-01 | 86.1% | 56.4% |
| 3743045 | 3409.1.1.0 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain | 0.69 | 59.0 | 3.95e-01 | 97.2% | 27.9% |
| 3928865 | 327.19.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › Mlh1_C | 0.69 | 58.0 | 4.24e-01 | 100.0% | 38.1% |
| 3448464 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.68 | 56.0 | 3.36e-01 | 100.0% | 22.1% |
| 3197097 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.68 | 59.0 | 3.44e-01 | 100.0% | 26.9% |
| 3445 | 178.1.1.1 ↗ | alpha arrays › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB | 0.63 | 47.0 | 3.62e-01 | 94.4% | 33.7% |
| 3875839 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.59 | 48.0 | 3.41e-01 | 91.7% | 32.2% |
| 3447434 | 178.1.1.1 ↗ | alpha arrays › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB | 0.59 | 48.0 | 3.72e-01 | 94.4% | 44.7% |