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KF614509.1__AHC30503.1__L338C_086__00086

Bact-Vir

KF614509.1__AHC30503.1__L338C_086__00086

Identity

Accession:
KF614509 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_vB_RleS_L338C

TaxID: 1414737

Cluster

View cluster (12 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-72
PDB
Domain cluster: rep: IMGVR_UViG_3300009362_000003-3300009362-Ga0118673_10002961__D14-82
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xw3A01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.85 78.0 6.91e-01 100.0% 81.2%
1vk1A01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.81 75.0 6.48e-01 100.0% 71.6%
1vz0A01 3.90.1530.30 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › 0.80 55.0 5.77e-01 72.5% 87.3%
2hwjA01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.76 68.0 5.59e-01 100.0% 58.7%
1r1mA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.58 42.0 3.42e-01 78.3% 56.4%
3ozbA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.57 40.0 2.87e-01 76.8% 60.2%
1h2eA00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.57 41.0 2.99e-01 79.7% 26.1%
2xgvA00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.55 40.0 3.31e-01 79.7% 92.5%
4rhaA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.54 39.0 3.23e-01 78.3% 53.4%
1i9sA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 46.0 3.38e-01 100.0% 73.5%
1wy5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.51 38.0 2.77e-01 82.6% 74.2%
4ggmX02 3.40.140.80 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › LpxI C-terminal catalytic domain 0.51 41.0 3.34e-01 94.2% 83.3%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943767 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.95 90.0 8.25e-01 100.0% 83.5%
3945776 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.94 88.0 7.78e-01 100.0% 78.9%
4927766 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.92 87.0 8.01e-01 100.0% 87.1%
5073612 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.91 86.0 7.29e-01 100.0% 74.3%
4928673 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.91 84.0 7.93e-01 98.6% 91.3%
3971842 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.91 85.0 6.68e-01 100.0% 62.3%
5082449 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.91 84.0 7.62e-01 100.0% 83.3%
5082298 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.90 81.0 7.29e-01 95.7% 88.9%
4862436 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.90 83.0 7.39e-01 100.0% 86.3%
2710114 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.90 84.0 7.50e-01 100.0% 81.7%
4970064 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.89 84.0 7.91e-01 100.0% 95.0%
4946472 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.89 83.0 7.85e-01 100.0% 95.0%
3587492 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.89 82.0 7.18e-01 100.0% 76.0%
5071247 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.89 83.0 6.85e-01 100.0% 85.2%
3279914 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.89 82.0 6.04e-01 100.0% 69.1%
4344404 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.89 83.0 7.17e-01 100.0% 74.0%
5032171 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.88 80.0 7.36e-01 97.1% 82.4%
2841795 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.88 81.0 7.37e-01 100.0% 82.2%
5071270 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.88 78.0 7.26e-01 97.1% 81.2%
5052297 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.87 81.0 7.48e-01 100.0% 82.4%
4940273 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.87 73.0 7.10e-01 89.9% 89.3%
3280315 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.87 80.0 7.38e-01 98.6% 82.4%
4116056 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.87 81.0 7.48e-01 100.0% 83.5%
2543651 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.86 80.0 7.28e-01 100.0% 83.1%
5031965 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.86 81.0 5.82e-01 100.0% 39.4%
3942579 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.86 78.0 7.61e-01 98.6% 97.3%
4958363 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.86 80.0 7.37e-01 100.0% 89.4%
3948471 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.86 78.0 6.52e-01 100.0% 73.0%
4683061 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.85 80.0 7.05e-01 100.0% 73.7%
3772471 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.84 78.0 7.05e-01 100.0% 86.7%
3667418 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.84 59.0 6.56e-01 72.5% 96.4%
85732 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.83 76.0 6.21e-01 100.0% 64.5%
3946729 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.83 75.0 6.70e-01 100.0% 90.5%
5083282 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.83 75.0 6.58e-01 100.0% 81.0%
3723395 876.1.1.6 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › PF29418 0.82 74.0 6.12e-01 100.0% 79.0%
3278076 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.82 74.0 6.76e-01 100.0% 83.3%
5052345 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.81 74.0 6.72e-01 100.0% 81.1%
3992892 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.81 74.0 7.05e-01 100.0% 93.8%
1842312 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.80 73.0 6.78e-01 100.0% 82.6%
5018770 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.77 67.0 5.52e-01 97.1% 72.8%
3686504 876.1.1.6 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › PF29418 0.77 68.0 5.98e-01 100.0% 75.2%
5053121 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.76 69.0 5.50e-01 100.0% 54.1%
7603 876.1.1.2 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc_2 0.76 68.0 6.37e-01 100.0% 86.0%
5081788 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.75 66.0 5.68e-01 100.0% 83.6%
5035573 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.72 64.0 5.42e-01 100.0% 75.7%
3602315 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.72 61.0 4.64e-01 98.6% 100.0%
4516798 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.60 45.0 2.80e-01 84.1% 33.2%
4973286 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.56 41.0 3.00e-01 78.3% 31.8%
1125560 2011.2.1.1 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 0.56 40.0 2.76e-01 78.3% 54.6%
3218529 109.4.1.121 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mo25 0.54 40.0 2.56e-01 79.7% 31.7%
3730554 7525.1.1.1 ↗ a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 0.54 39.0 2.81e-01 81.2% 23.9%
3732556 376.1.1.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › FANCL_C 0.52 34.0 3.20e-01 91.3% 54.1%
3173752 2002.1.1.192 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AMP_deaminase 0.51 40.0 2.42e-01 94.2% 12.7%