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KF623294.1__AGX01842.1__X__00120

Bact-Vir

KF623294.1__AGX01842.1__X__00120

Identity

Accession:
KF623294 ↗
Kingdom:
phage

Quality

75.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Iapetusvirus› Erwinia_phage_PhiEaH1

TaxID: 1401669

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-93
PDB
Domain cluster: rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00670__D5-100
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ou8A00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.89 84.0 7.84e-01 100.0% 84.0%
2nysA00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.77 70.0 6.36e-01 100.0% 81.2%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 44.0 5.18e-01 94.3% 100.0%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 42.0 4.77e-01 75.0% 86.4%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.64 45.0 4.46e-01 97.7% 69.5%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 45.0 4.90e-01 100.0% 98.5%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.61 44.0 4.27e-01 100.0% 67.3%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 41.0 4.41e-01 88.6% 84.0%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.60 35.0 3.92e-01 70.5% 74.6%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 39.0 4.33e-01 89.8% 89.2%
3fvqA03 2.40.50.470 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 29.0 3.57e-01 70.5% 72.4%
1kaxA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.55 30.0 3.57e-01 89.8% 81.8%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 29.0 2.75e-01 85.2% 42.9%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.54 44.0 4.46e-01 100.0% 93.3%
1e88A03 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.53 24.0 3.19e-01 90.9% 81.0%
4jj0B00 2.30.42.60 Mainly Beta › Roll › Pdz3 Domain › 0.53 41.0 3.24e-01 83.0% 60.0%
3fm2A00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.52 46.0 4.05e-01 100.0% 78.9%
1ynjJ02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 29.0 3.23e-01 70.5% 71.0%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 36.0 3.28e-01 71.6% 80.7%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.52 43.0 4.27e-01 89.8% 87.8%
2jaeA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 38.0 3.00e-01 77.3% 61.6%
6nrzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 41.0 3.42e-01 86.4% 94.8%
3ossC00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.51 32.0 3.62e-01 86.4% 86.2%
2ivdB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 37.0 3.04e-01 77.3% 52.4%
4on1A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.51 42.0 3.62e-01 90.9% 80.6%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.50 36.0 3.24e-01 73.9% 77.3%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
605 4.1.2.1 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB 0.89 84.0 7.84e-01 100.0% 84.0%
165392 4.1.2.1 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB 0.77 70.0 6.29e-01 100.0% 79.2%
4282868 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 53.0 5.80e-01 98.9% 94.3%
4559371 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 50.0 5.68e-01 98.9% 98.4%
4270910 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 52.0 5.67e-01 98.9% 94.3%
4141828 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 53.0 5.67e-01 100.0% 91.9%
4168737 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 53.0 5.66e-01 100.0% 91.9%
3281945 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 53.0 5.35e-01 100.0% 80.0%
4031510 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 50.0 4.99e-01 100.0% 77.8%
4545520 4.7.1.7 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL 0.65 48.0 4.95e-01 98.9% 82.4%
4973804 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 39.0 4.20e-01 84.1% 72.0%
3739064 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 45.0 5.13e-01 97.7% 100.0%
3942912 4.1.1.323 ↗ beta barrels › SH3 › SH3 › SH3 › WYL 0.60 45.0 4.58e-01 98.9% 83.5%
3953959 4.1.1.424 ↗ beta barrels › SH3 › SH3 › SH3 › PF29823 0.60 35.0 4.29e-01 75.0% 100.0%
3978997 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.59 46.0 4.53e-01 100.0% 80.0%
4052768 3675.1.1.0 ↗ a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain 0.55 39.0 3.28e-01 75.0% 62.0%
4031110 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 40.0 3.61e-01 78.4% 71.2%
5035527 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.54 45.0 4.21e-01 93.2% 90.9%
4152365 391.1.1.1 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 0.53 25.0 3.18e-01 92.0% 80.0%
5056886 219.1.1.51 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.52 47.0 3.59e-01 100.0% 49.3%
3988707 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 31.0 3.61e-01 92.0% 90.9%
169967 4216.1.1.2 ↗ a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX 0.52 46.0 4.04e-01 100.0% 78.4%
4947218 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 36.0 3.35e-01 72.7% 81.6%
4962224 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.51 39.0 3.23e-01 83.0% 77.6%
5074343 319.1.1.23 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 0.51 33.0 3.53e-01 95.5% 76.0%
4964835 223.2.1.63 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DUF7522 0.50 34.0 3.16e-01 70.5% 86.1%
3238130 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.50 40.0 3.46e-01 87.5% 71.0%
4532472 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 35.0 3.35e-01 71.6% 79.0%