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KF669650.1__AGY47122.1__CN1A_13__00013

Bact-Vir

KF669650.1__AGY47122.1__CN1A_13__00013

Identity

Accession:
KF669650 ↗
Kingdom:
phage

Quality

84.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cinunavirus› Clavibacter_phage_CN1A

TaxID: 1406793

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-86
PDB
Domain cluster: rep: MN586027.1__QGJ93527.1__SEA_MUFASA8_79__00079__D23-91
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4e8uA00 3.30.70.2890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › XS domain 0.52 46.0 3.59e-01 98.7% 71.7%
1wh2A01 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.51 28.0 3.08e-01 100.0% 62.3%
3n05A02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 43.0 3.20e-01 94.7% 81.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3520629 7523.1.1.20 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Lig_chan-Glu_bd 0.61 32.0 2.58e-01 86.7% 26.4%
3904789 386.1.1.277 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29496 0.55 28.0 3.54e-01 100.0% 87.5%
None — 0.54 41.0 2.83e-01 81.3% 97.9%
4024679 822.1.1.1 ↗ a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF 0.54 29.0 3.24e-01 100.0% 65.0%
3924848 822.1.1.1 ↗ a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF 0.53 30.0 3.02e-01 100.0% 52.0%
3930342 822.1.1.2 ↗ a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_2 0.53 29.0 3.24e-01 98.7% 69.1%