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KF669650.1__AGY47175.1__CN1A_66__00066
Bact-VirKF669650.1__AGY47175.1__CN1A_66__00066
Identity
- Accession:
- KF669650 ↗
- Kingdom:
- phage
Quality
79.5
mean pLDDT
Taxonomy
TaxID: 1406793
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-85
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b01A00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.79 | 51.0 | 5.04e-01 | 92.7% | 62.8% |
| 2o2kA01 | 3.10.196.10 | Alpha Beta › Roll › Cobalamin-dependent Methionine Synthase; domain 1 › Vitamin B12-dependent methionine synthase, activation domain | 0.76 | 45.0 | 2.77e-01 | 78.0% | 9.9% |
| 1e3oC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 41.0 | 3.99e-01 | 80.5% | 52.1% |
| 2oap202 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 43.0 | 2.65e-01 | 80.5% | 78.0% |
| 3itqA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.58 | 42.0 | 2.80e-01 | 80.5% | 68.6% |
| 5iipA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 46.0 | 3.31e-01 | 97.6% | 50.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3624360 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 55.0 | 4.59e-01 | 92.7% | 65.0% |
| None | — | 0.64 | 47.0 | 2.78e-01 | 80.5% | 22.5% | |
| 4014164 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.63 | 53.0 | 4.66e-01 | 100.0% | 76.9% |
| 4561787 | 6146.2.1.1 ↗ | a+b two layers › Cas3 C-terminal domain › Cas3 subtype I-F/YPEST C-terminal domain › Cas3 subtype I-F/YPEST C-terminal domain › Cas3-like_C | 0.54 | 47.0 | 3.59e-01 | 100.0% | 65.3% |
| 3190306 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 40.0 | 3.18e-01 | 87.8% | 76.2% |
| 4978668 | 1137.2.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › GckA/TtuD-like domain 2 › GckA/TtuD-like domain 2 › MOFRL | 0.53 | 44.0 | 2.99e-01 | 100.0% | 58.2% |
| 4995760 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.52 | 42.0 | 3.47e-01 | 90.2% | 60.0% |
| 5053153 | 304.111.1.0 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like | 0.52 | 40.0 | 2.78e-01 | 95.1% | 64.0% |