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KF669652.1__AGY47410.1__Grass_145__00145

Bact-Vir

KF669652.1__AGY47410.1__Grass_145__00145

Identity

Accession:
KF669652 ↗
Kingdom:
phage

Quality

73.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Nitunavirus› Bacillus_phage_Grass

TaxID: 1406785

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-106
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 45.0 5.65e-01 100.0% 96.5%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 41.0 5.12e-01 98.9% 91.1%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 42.0 5.00e-01 97.8% 88.1%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 37.0 4.91e-01 96.7% 95.8%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 49.0 5.11e-01 100.0% 77.4%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.71 46.0 5.25e-01 100.0% 91.0%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.67 46.0 4.55e-01 98.9% 67.0%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.62 41.0 3.91e-01 100.0% 57.8%
2lc4A00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.61 41.0 3.82e-01 91.3% 56.8%
3exmA01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.55 50.0 3.90e-01 98.9% 61.5%
3pquA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.54 38.0 3.14e-01 75.0% 52.5%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 37.0 3.98e-01 96.7% 87.2%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.51 39.0 3.21e-01 80.4% 82.5%
3nqkA02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.51 45.0 3.79e-01 98.9% 89.4%
2a74A02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.50 33.0 3.28e-01 100.0% 62.4%
1r77A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 45.0 4.38e-01 96.7% 99.0%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4426276 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 54.0 6.19e-01 95.7% 90.0%
4293453 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 49.0 5.29e-01 100.0% 75.0%
4015238 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.75 45.0 4.01e-01 100.0% 44.0%
4041376 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 48.0 5.17e-01 100.0% 77.5%
3710131 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.67 59.0 5.04e-01 100.0% 61.1%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.66 48.0 4.99e-01 100.0% 82.4%
3784612 219.1.1.115 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.63 47.0 3.86e-01 100.0% 43.5%
3834112 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.62 49.0 5.29e-01 100.0% 97.5%
3342814 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 49.0 4.89e-01 100.0% 82.1%
5070306 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 51.0 4.97e-01 100.0% 85.0%
4995896 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 45.0 3.96e-01 100.0% 55.4%
3302391 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.59 46.0 4.03e-01 100.0% 55.7%
4517901 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 45.0 4.50e-01 100.0% 82.1%
5039728 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.54 41.0 3.01e-01 79.3% 47.5%
4323235 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.52 44.0 4.15e-01 100.0% 76.4%
3622909 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 45.0 4.15e-01 97.8% 89.2%
4265077 5084.1.1.34 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 0.51 43.0 3.72e-01 98.9% 96.2%
3575735 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 43.0 4.00e-01 97.8% 92.5%
3525668 10.32.1.69 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B 0.51 37.0 2.81e-01 100.0% 32.3%