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KF669656.1__AGY47979.1__Petty_7__00007

Bact-Vir

KF669656.1__AGY47979.1__Petty_7__00007

Identity

Accession:
KF669656 ↗
Kingdom:
phage

Quality

84.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-82
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.85 65.0 6.82e-01 88.9% 87.9%
3hfnA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.84 63.0 6.81e-01 88.9% 93.3%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.83 55.0 6.58e-01 79.2% 100.0%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.80 65.0 6.83e-01 97.2% 93.9%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 60.0 6.02e-01 91.7% 90.5%
3pggA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 5.61e-01 93.1% 93.6%
1dkiC01 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.64 53.0 3.89e-01 91.7% 37.1%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.60 42.0 3.98e-01 90.3% 59.1%
4h40A01 2.60.40.3730 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like 0.60 50.0 3.97e-01 95.8% 82.3%
1mkeA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.66e-01 88.9% 61.8%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 43.0 3.80e-01 86.1% 56.6%
3pp2A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 45.0 3.99e-01 93.1% 95.5%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.56 45.0 3.65e-01 90.3% 46.0%
1svdM00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.56 47.0 4.22e-01 100.0% 71.3%
3kysA00 2.70.50.80 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › 0.55 48.0 3.49e-01 100.0% 88.0%
4rdlA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.54 43.0 3.91e-01 91.7% 68.2%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.54 45.0 3.79e-01 95.8% 82.0%
3tfmA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.95e-01 88.9% 92.9%
7mjrA02 2.60.120.240 Mainly Beta › Sandwich › Jelly Rolls › Protective antigen, heptamerisation domain 0.54 44.0 3.32e-01 91.7% 97.4%
4r8tB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 43.0 4.33e-01 97.2% 86.3%
4n0rA03 2.60.40.3950 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.85e-01 93.1% 92.7%
2qz5A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 44.0 3.57e-01 97.2% 69.1%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 46.0 4.00e-01 98.6% 87.5%
2yocA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 3.97e-01 100.0% 87.0%
4ipuA00 3.55.40.10 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain 0.52 36.0 3.05e-01 75.0% 78.1%
2esvD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 3.86e-01 97.2% 91.7%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 38.0 3.30e-01 83.3% 95.2%
1j0hA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 45.0 3.79e-01 100.0% 84.8%
2f09A00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.51 38.0 3.67e-01 80.6% 97.6%
2fmlA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.51 38.0 2.97e-01 80.6% 89.6%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.51 36.0 3.59e-01 77.8% 100.0%
1u9tA02 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.50 45.0 3.39e-01 97.2% 50.3%
5c86A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 44.0 3.98e-01 100.0% 87.1%
2aq6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 42.0 3.48e-01 98.6% 94.4%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 43.0 3.50e-01 100.0% 53.1%
4hwmA00 2.40.128.500 Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein 0.50 40.0 3.47e-01 90.3% 83.8%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4478186 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 50.0 6.17e-01 77.8% 100.0%
5045214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 70.0 7.10e-01 93.1% 94.3%
4208040 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.78 65.0 6.55e-01 91.7% 87.7%
5033892 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 65.0 6.82e-01 90.3% 98.5%
4212091 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.77 63.0 6.60e-01 91.7% 95.4%
4139778 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.77 63.0 6.33e-01 91.7% 86.3%
3290160 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.76 63.0 6.07e-01 88.9% 80.0%
3978997 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.75 64.0 5.80e-01 91.7% 73.7%
3233110 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.75 63.0 5.63e-01 90.3% 92.9%
3509763 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.75 63.0 4.85e-01 90.3% 73.3%
3289944 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.74 63.0 5.84e-01 91.7% 75.6%
3519122 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.73 62.0 5.75e-01 91.7% 77.8%
3942912 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.73 62.0 5.89e-01 91.7% 82.4%
3286662 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.73 61.0 5.48e-01 91.7% 67.0%
5029031 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 56.0 6.01e-01 97.2% 98.3%
3590468 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 60.0 6.10e-01 93.1% 91.4%
4484974 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 62.0 5.82e-01 91.7% 85.9%
3283097 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.72 59.0 5.16e-01 90.3% 64.5%
4596087 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 59.0 5.88e-01 88.9% 94.7%
3587629 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 6.10e-01 91.7% 98.5%
3280641 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.71 59.0 5.25e-01 90.3% 70.0%
4251101 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 60.0 5.65e-01 91.7% 85.9%
3954254 4.1.1.387 beta barrels › SH3 › SH3 › SH3 › SH3_Rv0428c 0.70 56.0 5.84e-01 87.5% 93.8%
4870495 304.169.1.1 a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WYL 0.70 58.0 5.06e-01 91.7% 63.9%
3281271 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.69 58.0 5.38e-01 91.7% 78.9%
4292822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 60.0 5.94e-01 100.0% 96.0%
4999705 4.1.2.2 beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.67 59.0 5.45e-01 100.0% 81.1%
5040888 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.66 59.0 5.74e-01 100.0% 92.5%
3967527 4216.1.1.1 a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › HemS 0.66 58.0 4.42e-01 97.2% 62.7%
5010832 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.65 54.0 5.06e-01 90.3% 88.8%
5073888 4.1.2.2 beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.65 56.0 5.49e-01 100.0% 96.2%
3597963 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 50.0 4.47e-01 84.7% 87.6%
5043132 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.64 53.0 5.07e-01 91.7% 90.6%
5039793 219.1.1.77 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 0.62 50.0 3.67e-01 90.3% 40.5%
3226290 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 52.0 4.27e-01 100.0% 54.8%
3991461 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 41.0 3.78e-01 75.0% 100.0%
3742084 220.1.1.67 beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 0.57 46.0 3.63e-01 93.1% 55.2%
3219381 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 50.0 4.65e-01 100.0% 83.3%
3938619 11.1.1.230 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › YBD 0.56 49.0 3.56e-01 100.0% 88.5%
3620924 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.56 45.0 4.35e-01 90.3% 97.6%
3418960 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 44.0 3.22e-01 87.5% 42.5%
4485578 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 44.0 3.19e-01 91.7% 53.0%
5013280 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 45.0 4.16e-01 91.7% 75.8%
3778237 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.55 46.0 3.24e-01 97.2% 40.0%
4324318 11.1.1.230 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › YBD 0.54 47.0 3.81e-01 95.8% 67.4%
3429729 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.54 42.0 3.08e-01 86.1% 33.2%
4584002 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.53 43.0 3.86e-01 93.1% 88.6%
3589778 1.1.5.78 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_TTP_1 0.53 45.0 3.39e-01 93.1% 66.5%
3801890 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.52 41.0 3.06e-01 87.5% 42.0%
3440052 11.1.1.887 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TMM62 0.52 45.0 3.77e-01 98.6% 88.5%
3708027 223.3.1.0 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins 0.52 37.0 2.81e-01 75.0% 41.5%
4945627 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.50e-01 97.2% 71.2%
3478145 10.32.1.172 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like 0.52 43.0 3.17e-01 91.7% 90.2%
3240481 10.32.1.172 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like 0.52 42.0 3.29e-01 91.7% 90.0%
3694675 859.1.1.1 a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.52 45.0 3.22e-01 100.0% 67.0%
3286800 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 4.00e-01 100.0% 95.2%
3731697 4019.1.1.1 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.51 38.0 2.41e-01 80.6% 76.7%
3931580 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.51 41.0 3.56e-01 91.7% 78.3%
5025509 210.1.2.1 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Penicil_amidase 0.51 43.0 2.51e-01 100.0% 43.3%
1162196 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.51 42.0 3.73e-01 98.6% 87.0%
3888374 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 43.0 3.53e-01 100.0% 73.1%
3735241 3156.1.1.14 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › hGDE_N 0.50 42.0 3.56e-01 100.0% 83.7%
D2 high residues 91-134
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nnwA01 3.30.420.220 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.79 68.0 4.92e-01 97.7% 48.4%
7vbnL01 3.30.160.190 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › atu1810 like domain 0.78 71.0 5.42e-01 100.0% 72.6%
3mazA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.77 59.0 4.58e-01 93.2% 38.4%
3id6A01 3.30.420.220 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.73 65.0 4.83e-01 100.0% 56.6%
4czxA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.70 49.0 2.94e-01 75.0% 18.8%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 48.0 2.88e-01 75.0% 20.9%
8f5pC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 50.0 3.02e-01 81.8% 19.5%
1x05A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 53.0 3.84e-01 90.9% 38.8%
2b5xA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 54.0 3.82e-01 97.7% 79.7%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 50.0 4.12e-01 88.6% 48.3%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 51.0 4.01e-01 93.2% 46.6%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 53.0 4.40e-01 100.0% 91.0%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 43.0 3.21e-01 88.6% 25.6%
2f9wA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 53.0 3.94e-01 100.0% 55.0%
3ha9A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 47.0 3.31e-01 84.1% 77.0%
3awiA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 46.0 2.91e-01 100.0% 13.5%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.64 52.0 4.06e-01 95.5% 44.2%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 42.0 3.01e-01 93.2% 21.2%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 44.0 3.06e-01 100.0% 20.2%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.63 50.0 4.76e-01 97.7% 75.4%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 48.0 3.46e-01 90.9% 28.4%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.63 48.0 3.28e-01 84.1% 96.2%
3hiaA00 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.62 42.0 3.73e-01 72.7% 90.9%
3hr8A02 3.30.250.10 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain 0.61 48.0 4.30e-01 100.0% 64.0%
4dm5A00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.61 47.0 3.90e-01 88.6% 51.7%
6lyxA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 50.0 3.79e-01 97.7% 74.4%
3me8B00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 51.0 3.55e-01 97.7% 80.8%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 49.0 3.04e-01 95.5% 75.7%
1vw4F02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.61 44.0 3.54e-01 79.5% 91.3%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 49.0 3.71e-01 90.9% 39.4%
5j3tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 46.0 3.33e-01 88.6% 29.4%
3gd0A02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.60 49.0 3.67e-01 93.2% 58.9%
4aqlA01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.59 48.0 3.60e-01 100.0% 39.7%
3eytB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 48.0 3.42e-01 97.7% 79.2%
6hgcA01 3.40.532.10 Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase 0.59 46.0 3.19e-01 100.0% 25.7%
1mkeA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 45.0 3.15e-01 90.9% 25.7%
3k2yA00 3.30.70.2330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 51.0 3.92e-01 100.0% 64.1%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.59 44.0 3.83e-01 81.8% 91.2%
4gp0B02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 48.0 3.60e-01 97.7% 67.5%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 47.0 3.69e-01 100.0% 59.3%
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 47.0 3.84e-01 95.5% 80.0%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 45.0 3.47e-01 90.9% 38.2%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.14e-01 90.9% 27.1%
2v3uA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 41.0 2.99e-01 84.1% 28.6%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 39.0 2.81e-01 100.0% 20.8%
3cxbB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.57e-01 97.7% 43.7%
1dbhA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 44.0 3.36e-01 97.7% 37.5%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.56 38.0 3.16e-01 72.7% 39.2%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.56 45.0 3.34e-01 100.0% 58.1%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 41.0 3.34e-01 93.2% 41.3%
3ou2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 41.0 2.72e-01 84.1% 69.1%
3pnnA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 42.0 2.59e-01 86.4% 45.5%
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.54 38.0 3.90e-01 77.3% 92.3%
2jmbA00 2.40.128.290 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 0.54 44.0 3.79e-01 100.0% 75.9%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 40.0 3.20e-01 100.0% 85.8%
4pdyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 37.0 2.93e-01 81.8% 57.6%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5081646 7528.1.1.0 a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains 0.88 62.0 4.59e-01 75.0% 31.4%
4117409 880.1.1.1 a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind 0.86 78.0 4.37e-01 100.0% 16.8%
5031945 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.81 72.0 5.02e-01 100.0% 46.7%
5013411 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.80 70.0 5.08e-01 100.0% 50.0%
3976684 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.80 66.0 5.39e-01 90.9% 52.5%
4995988 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.79 69.0 4.86e-01 100.0% 46.7%
4953660 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.78 69.0 5.00e-01 100.0% 50.0%
4946976 3407.1.1.5 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop 0.78 68.0 4.70e-01 100.0% 43.4%
3604573 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.74 53.0 2.92e-01 77.3% 8.7%
5014724 295.1.1.51 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C 0.71 59.0 4.67e-01 100.0% 88.0%
3716107 2484.2.1.0 mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain 0.71 58.0 5.26e-01 100.0% 74.2%
4081720 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.70 53.0 3.15e-01 100.0% 10.4%
4518300 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.70 52.0 3.09e-01 100.0% 10.7%
4484607 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.68 51.0 3.00e-01 100.0% 9.2%
4208229 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.67 47.0 4.61e-01 77.3% 68.0%
4566136 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.66 49.0 3.05e-01 100.0% 12.8%
4976401 230.1.1.3 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.66 54.0 3.70e-01 93.2% 25.8%
4446725 702.1.1.4 beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack 0.66 45.0 3.02e-01 72.7% 38.3%
5069568 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.66 50.0 4.07e-01 86.4% 94.4%
4959480 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.66 53.0 4.98e-01 100.0% 86.7%
4927504 3407.1.1.0 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.66 56.0 4.10e-01 100.0% 45.6%
5036089 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.65 57.0 4.10e-01 100.0% 45.6%
4932280 3407.1.1.0 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.64 57.0 4.48e-01 100.0% 55.6%
4956223 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.64 52.0 3.25e-01 100.0% 86.4%
3993001 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 50.0 3.44e-01 90.9% 25.2%
3630302 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.63 50.0 3.79e-01 90.9% 35.5%
4545531 220.1.1.255 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_10 0.63 50.0 4.20e-01 100.0% 51.2%
4989457 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 46.0 4.49e-01 81.8% 78.0%
3507234 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.63 50.0 3.74e-01 90.9% 35.5%
3396736 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.62 51.0 4.62e-01 100.0% 81.5%
3926363 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 50.0 3.68e-01 90.9% 33.9%
3648024 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.62 46.0 3.34e-01 88.6% 28.8%
3958672 2485.1.1.56 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rng_hyd_C 0.62 46.0 4.09e-01 86.4% 100.0%
3937216 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.62 46.0 3.29e-01 88.6% 27.7%
3709624 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 47.0 3.51e-01 84.1% 40.0%
3388895 220.1.1.170 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.61 47.0 3.58e-01 90.9% 34.5%
5059099 241.2.1.0 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.61 47.0 3.87e-01 90.9% 45.5%
3912099 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 49.0 3.75e-01 90.9% 38.1%
3790351 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.60 45.0 3.39e-01 88.6% 30.8%
5051523 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 45.0 3.37e-01 100.0% 30.8%
4023242 220.1.1.187 beta barrels › PH domain-like › PH domain-like › PH domain-like › VPS13_C 0.60 45.0 3.45e-01 90.9% 32.8%
3508939 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.60 45.0 3.31e-01 90.9% 29.2%
3602759 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 44.0 4.16e-01 90.9% 65.0%
3939128 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 47.0 3.60e-01 90.9% 36.4%
4983508 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 3.85e-01 84.1% 98.6%
5047735 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 46.0 3.26e-01 97.7% 26.8%
5071919 220.1.1.320 beta barrels › PH domain-like › PH domain-like › PH domain-like › Zn_Ribbon_1 0.58 43.0 3.17e-01 88.6% 27.1%
3713772 331.1.1.5 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.58 39.0 3.29e-01 70.5% 94.9%
3939412 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 48.0 3.80e-01 95.5% 63.2%
3706686 4263.2.1.0 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.57 42.0 3.89e-01 90.9% 60.0%
397140 2.2.1.0 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins 0.57 46.0 3.81e-01 95.5% 81.8%
3560659 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.57 45.0 2.76e-01 90.9% 35.4%
1826876 702.1.1.3 beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 0.56 43.0 2.76e-01 86.4% 34.5%
4978405 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 42.0 3.16e-01 90.9% 29.1%
3399725 220.1.1.50 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 0.56 45.0 3.51e-01 100.0% 47.8%
4387556 3468.1.1.1 a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.55 47.0 3.68e-01 100.0% 65.7%
4533523 4263.2.1.1 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.55 43.0 3.97e-01 100.0% 67.7%
4215069 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 43.0 3.61e-01 97.7% 83.3%
4004179 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.54 46.0 2.94e-01 100.0% 23.9%
4933665 2.21.1.0 beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.54 36.0 3.02e-01 72.7% 60.0%
3263649 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 38.0 3.00e-01 90.9% 35.4%
3256547 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 39.0 3.23e-01 93.2% 40.0%
3263167 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.53 38.0 2.80e-01 81.8% 52.1%
3270836 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.53 39.0 3.13e-01 93.2% 39.1%
3876027 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.52 42.0 3.06e-01 100.0% 43.3%
5045224 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 34.0 2.93e-01 72.7% 65.9%
5037441 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 40.0 3.00e-01 88.6% 61.8%
3668711 109.4.1.916 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_COPA_B 0.50 38.0 2.28e-01 100.0% 10.9%