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KF669658.1__AGY48117.1__Presley_50__00050

Bact-Vir

KF669658.1__AGY48117.1__Presley_50__00050

Identity

Accession:
KF669658 ↗
Kingdom:
phage

Quality

68.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-83
PDB
D2 high residues 90-106_118-207
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yhsA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.59 30.0 3.13e-01 83.2% 52.6%
3jsbA01 1.20.1440.300 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain 0.59 31.0 3.59e-01 96.3% 69.1%
2w9mA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.58 31.0 3.84e-01 88.8% 82.4%
2pmrA00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.50 33.0 3.92e-01 96.3% 94.7%
1zymA02 1.10.274.10 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain 0.50 34.0 3.23e-01 86.9% 58.7%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3941425 109.4.1.697 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Transposase_31 0.62 33.0 3.04e-01 88.8% 41.5%
3284374 109.3.1.156 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF8129 0.60 28.0 3.64e-01 84.1% 78.3%
3602860 109.61.1.1 alpha superhelices › Repetitive alpha hairpins › Uncharacterized protein PF2048.1 › Uncharacterized protein PF2048.1 › MJ1579 0.60 31.0 3.76e-01 84.1% 77.1%