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KF669662.1__AGY48573.1__Spock_173__00173
Bact-VirKF669662.1__AGY48573.1__Spock_173__00173
Identity
- Accession:
- KF669662 ↗
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Taxonomy
TaxID: 1406791
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-69
Domain cluster:
rep: NC_023501.1__YP_009003052.1__BPS10C_166__00166__D51-103
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ch7A02 | 3.30.70.3460 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 52.0 | 3.70e-01 | 96.6% | 44.1% |
| 2cg4A02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.61 | 49.0 | 4.40e-01 | 91.5% | 95.2% |
| 4pcqA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.60 | 49.0 | 4.35e-01 | 89.8% | 97.6% |
| 1f08B00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.60 | 50.0 | 3.80e-01 | 94.9% | 73.1% |
| 1nxiA00 | 3.30.70.970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like | 0.60 | 51.0 | 4.03e-01 | 100.0% | 71.2% |
| 3eeqB03 | 3.30.420.180 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › CobE/GbiG C-terminal domain | 0.59 | 41.0 | 3.41e-01 | 74.6% | 61.7% |
| 3bb5A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 48.0 | 4.09e-01 | 94.9% | 100.0% |
| 3i4pA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.58 | 47.0 | 4.24e-01 | 91.5% | 96.4% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 4.14e-01 | 96.6% | 100.0% |
| 1vmbA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.58 | 48.0 | 4.10e-01 | 100.0% | 100.0% |
| 1h72C02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.57 | 47.0 | 3.66e-01 | 93.2% | 94.8% |
| 4e98C00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 48.0 | 4.06e-01 | 100.0% | 87.6% |
| 2gj2A00 | 3.30.70.2070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › VP9 protein domain | 0.57 | 47.0 | 4.36e-01 | 96.6% | 94.9% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 45.0 | 3.98e-01 | 89.8% | 88.9% |
| 2nuhA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 47.0 | 4.03e-01 | 100.0% | 88.5% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.56 | 48.0 | 3.91e-01 | 100.0% | 99.1% |
| 1h3dA03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 4.42e-01 | 93.2% | 98.5% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 46.0 | 4.12e-01 | 98.3% | 94.4% |
| 2pgcC01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 46.0 | 3.98e-01 | 94.9% | 100.0% |
| 7jsdA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.56 | 48.0 | 3.19e-01 | 100.0% | 24.2% |
| 2ww4A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.55 | 45.0 | 3.70e-01 | 94.9% | 92.4% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 42.0 | 3.92e-01 | 89.8% | 97.6% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 45.0 | 3.90e-01 | 100.0% | 86.8% |
| 1rjjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 46.0 | 3.85e-01 | 100.0% | 90.1% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 44.0 | 3.85e-01 | 93.2% | 100.0% |
| 1f0xA01 | 3.30.70.610 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › D-lactate dehydrogenase, cap domain, subdomain 1 | 0.54 | 46.0 | 3.92e-01 | 96.6% | 60.0% |
| 2pz4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 3.64e-01 | 94.9% | 53.3% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 46.0 | 4.07e-01 | 98.3% | 91.0% |
| 5xzqF00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 45.0 | 3.87e-01 | 98.3% | 100.0% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 43.0 | 4.00e-01 | 94.9% | 98.8% |
| 3nrkA02 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.54 | 44.0 | 3.70e-01 | 94.9% | 98.2% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 46.0 | 3.97e-01 | 100.0% | 94.9% |
| 2fiuA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 43.0 | 3.86e-01 | 98.3% | 100.0% |
| 3g87A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.53 | 43.0 | 4.16e-01 | 89.8% | 100.0% |
| 4p78A00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 45.0 | 4.02e-01 | 98.3% | 100.0% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 40.0 | 3.73e-01 | 86.4% | 97.5% |
| 3b8mC01 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.53 | 41.0 | 3.14e-01 | 89.8% | 100.0% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 42.0 | 3.72e-01 | 98.3% | 100.0% |
| 5k9fA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 44.0 | 3.75e-01 | 98.3% | 97.1% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 3.11e-01 | 100.0% | 47.2% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 44.0 | 3.82e-01 | 98.3% | 95.9% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 41.0 | 3.73e-01 | 89.8% | 97.6% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 42.0 | 3.66e-01 | 96.6% | 100.0% |
| 1uhvA01 | 2.60.40.1500 | Mainly Beta › Sandwich › Immunoglobulin-like › Glycosyl hydrolase domain; family 39 | 0.52 | 45.0 | 3.36e-01 | 100.0% | 51.3% |
| 1rocA00 | 2.60.40.1490 | Mainly Beta › Sandwich › Immunoglobulin-like › Histone chaperone ASF1-like | 0.51 | 43.0 | 3.24e-01 | 96.6% | 78.1% |
| 3mnfA00 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.51 | 38.0 | 2.67e-01 | 84.7% | 85.1% |
| 3tj8A02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.51 | 37.0 | 3.53e-01 | 81.4% | 90.5% |
| 3n28A02 | 3.30.70.2020 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 3.55e-01 | 96.6% | 56.6% |
| 6h8oA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.51 | 38.0 | 3.38e-01 | 86.4% | 71.6% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4019685 | 11.1.1.470 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Psg1 | 0.67 | 56.0 | 4.83e-01 | 94.9% | 65.3% |
| 4679704 | 10.32.1.5 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Ephrin_lbd | 0.64 | 56.0 | 4.58e-01 | 98.3% | 68.2% |
| 5043492 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 55.0 | 4.67e-01 | 100.0% | 93.9% |
| 3393328 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 53.0 | 4.24e-01 | 91.5% | 47.0% |
| 4964337 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.61 | 46.0 | 4.78e-01 | 91.5% | 92.7% |
| 4344942 | 10.9.1.3 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › Tyrosinase_C | 0.61 | 51.0 | 3.90e-01 | 98.3% | 88.0% |
| 5083388 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.60 | 50.0 | 3.91e-01 | 96.6% | 60.7% |
| 4992190 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.59 | 48.0 | 4.58e-01 | 89.8% | 100.0% |
| 5050778 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.59 | 50.0 | 4.63e-01 | 98.3% | 98.8% |
| 3289257 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.59 | 50.0 | 4.50e-01 | 96.6% | 87.1% |
| 3482654 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 52.0 | 3.70e-01 | 100.0% | 41.1% |
| 4932825 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 48.0 | 4.25e-01 | 91.5% | 71.8% |
| 4578112 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.58 | 50.0 | 4.38e-01 | 98.3% | 88.9% |
| 3784545 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 48.0 | 3.62e-01 | 94.9% | 59.3% |
| 5035636 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.56 | 46.0 | 3.98e-01 | 94.9% | 83.0% |
| 5082594 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 45.0 | 4.29e-01 | 89.8% | 98.6% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.56 | 46.0 | 4.54e-01 | 93.2% | 96.9% |
| 4043605 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.56 | 47.0 | 4.22e-01 | 94.9% | 92.9% |
| 3193056 | 11.1.1.869 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26283 | 0.56 | 49.0 | 3.68e-01 | 100.0% | 48.0% |
| 167276 | 304.5.1.8 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF3240 | 0.56 | 46.0 | 4.11e-01 | 98.3% | 93.3% |
| 3483850 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 46.0 | 3.98e-01 | 100.0% | 92.0% |
| 4142146 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 46.0 | 3.97e-01 | 100.0% | 69.0% |
| 3625992 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.54 | 45.0 | 3.90e-01 | 98.3% | 73.0% |
| 4632150 | 304.56.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like | 0.54 | 44.0 | 3.84e-01 | 93.2% | 82.1% |
| 4448178 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.54 | 45.0 | 3.49e-01 | 98.3% | 89.0% |
| 162851 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.54 | 43.0 | 4.00e-01 | 94.9% | 98.8% |
| 3924669 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 44.0 | 3.88e-01 | 96.6% | 100.0% |
| 4516880 | 304.8.1.74 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26539 | 0.54 | 42.0 | 3.84e-01 | 88.1% | 93.8% |
| 3744879 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 46.0 | 3.80e-01 | 100.0% | 57.3% |
| 3741311 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.53 | 40.0 | 3.30e-01 | 86.4% | 44.2% |
| 3895509 | 10.32.1.17 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Allantoicase | 0.53 | 44.0 | 3.19e-01 | 98.3% | 37.3% |
| 3732370 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.53 | 43.0 | 4.33e-01 | 96.6% | 100.0% |
| 5007029 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.52 | 42.0 | 3.74e-01 | 98.3% | 94.7% |
| 3506390 | 4342.1.1.0 ↗ | alpha complex topology › Tex N-terminal region-like › Tex N-terminal region-like › Tex N-terminal region-like | 0.52 | 46.0 | 3.11e-01 | 100.0% | 40.0% |
| 5044202 | 304.164.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein NegoA.19184.a C-terminal domain › Hypothetical protein NegoA.19184.a C-terminal domain | 0.52 | 45.0 | 4.25e-01 | 96.6% | 100.0% |
| 3746678 | 382.1.1.16 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › CD59 | 0.52 | 41.0 | 3.90e-01 | 94.9% | 92.0% |
| 3554291 | 382.1.1.16 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › CD59 | 0.51 | 41.0 | 3.78e-01 | 94.9% | 86.7% |
| 3863856 | 382.1.1.16 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › CD59 | 0.51 | 41.0 | 3.80e-01 | 94.9% | 87.5% |
| 4661756 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.51 | 42.0 | 3.92e-01 | 93.2% | 100.0% |
| 2391478 | 304.55.1.5 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Viral_Rep | 0.51 | 38.0 | 3.38e-01 | 86.4% | 71.6% |
| 3974593 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.50 | 39.0 | 3.65e-01 | 94.9% | 87.1% |