Back to structures

AIE08874.1

Arc-Vir

KF771641__AIE08874.1__X__00006

Identity

Accession:
KF771641 ↗
Protein ID:
AIE08874.1 ↗
Kingdom:
archaea

Quality

95.2 mean pLDDT

Taxonomy

TaxID: 1500510

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-96
PDB
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 49.0 4.04e-01 77.3% 68.7%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.67 52.0 3.92e-01 84.0% 78.3%
6o15A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.65 48.0 3.40e-01 78.7% 75.5%
3cwxA00 3.40.1420.20 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD 0.64 48.0 4.07e-01 80.0% 54.4%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.63 43.0 4.71e-01 70.7% 88.5%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.63 48.0 3.71e-01 82.7% 78.0%
2oqcA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.62 51.0 3.36e-01 89.3% 86.1%
5hkeA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.61 55.0 3.63e-01 100.0% 96.7%
7x36A01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 48.0 3.22e-01 90.7% 92.0%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 46.0 3.19e-01 88.0% 84.9%
2b5uA03 3.10.380.10 Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain 0.58 46.0 4.28e-01 88.0% 67.3%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 44.0 3.67e-01 82.7% 69.2%
6v55A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 44.0 3.21e-01 81.3% 57.4%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.55 46.0 3.81e-01 89.3% 92.9%
2f2hA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 38.0 3.43e-01 74.7% 67.0%
4a0tA01 6.20.80.10 Special › Other non-globular › Glycosyl hydrolase fold › 0.54 35.0 3.81e-01 73.3% 80.3%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.37e-01 77.3% 86.3%
5jeaD00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.54 43.0 3.04e-01 86.7% 44.6%
4ktpB02 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.54 39.0 3.84e-01 77.3% 92.7%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.58e-01 81.3% 98.2%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 42.0 3.56e-01 86.7% 97.6%
3u1xA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 43.0 3.13e-01 89.3% 95.9%
2psoB02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 39.0 3.02e-01 80.0% 55.6%
3sfvB02 6.10.140.2010 Special › Helix non-globular › Helix Hairpins › 0.52 42.0 3.15e-01 90.7% 42.0%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 39.0 2.69e-01 78.7% 35.4%
4m00A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 2.93e-01 88.0% 80.3%
5ov3B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 41.0 2.81e-01 92.0% 94.4%
1okqA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 43.0 3.29e-01 94.7% 80.6%
2py5A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.50 38.0 2.95e-01 84.0% 100.0%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4389597 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.72 45.0 4.23e-01 76.0% 53.3%
5037561 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.71 49.0 4.19e-01 72.0% 97.5%
4997629 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.70 53.0 3.96e-01 80.0% 85.9%
5078256 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.70 53.0 3.89e-01 80.0% 74.4%
4958290 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.68 51.0 3.38e-01 80.0% 45.7%
4945847 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.68 50.0 3.86e-01 77.3% 82.4%
4958164 298.1.1.42 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA 0.68 51.0 3.38e-01 80.0% 47.2%
4927792 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.68 51.0 3.31e-01 80.0% 43.2%
4934604 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.68 51.0 3.37e-01 80.0% 45.7%
4986395 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.68 51.0 3.77e-01 80.0% 73.8%
3461283 77.1.1.8 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › PF28611 0.67 46.0 4.25e-01 72.0% 75.5%
5003472 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.67 49.0 3.96e-01 76.0% 65.9%
3990049 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.66 49.0 3.13e-01 78.7% 51.8%
4956654 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.66 49.0 3.63e-01 80.0% 72.8%
4990696 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.65 49.0 3.24e-01 80.0% 44.4%
3233897 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 56.0 4.74e-01 94.7% 91.7%
3219284 2484.1.1.190 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 0.64 55.0 3.76e-01 94.7% 41.5%
4226766 3894.1.1.3 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M 0.64 45.0 3.71e-01 72.0% 46.2%
4489670 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.64 43.0 3.59e-01 70.7% 62.2%
4957722 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.64 47.0 3.82e-01 77.3% 50.0%
5042979 241.1.1.30 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 0.63 48.0 3.90e-01 84.0% 76.0%
3739072 376.1.1.43 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PRT6_C 0.61 45.0 3.48e-01 78.7% 73.2%
3235531 207.1.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.61 52.0 3.65e-01 94.7% 44.2%
4996362 220.1.1.87 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.60 43.0 3.86e-01 76.0% 93.5%
3474457 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.59 45.0 4.26e-01 85.3% 68.4%
5066047 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.59 45.0 3.40e-01 84.0% 86.1%
3247669 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.58 42.0 2.88e-01 76.0% 54.1%
4964052 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.58 44.0 3.38e-01 82.7% 84.9%
3260943 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.86e-01 89.3% 97.1%
3192325 376.1.1.43 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PRT6_C 0.58 43.0 3.25e-01 80.0% 67.7%
3715024 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.57 45.0 4.29e-01 88.0% 80.0%
4942828 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.57 51.0 3.97e-01 100.0% 90.9%
3812754 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.56 44.0 3.16e-01 85.3% 78.7%
3508839 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.56 46.0 3.30e-01 93.3% 74.9%
3211176 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.55 40.0 2.73e-01 76.0% 58.0%
4241220 5.1.3.48 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Gmad1 0.55 43.0 2.95e-01 85.3% 56.7%
3625619 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 41.0 3.10e-01 80.0% 63.4%
3550365 331.23.1.2 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS9_C 0.54 41.0 4.07e-01 80.0% 79.5%
4301684 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.54 46.0 3.58e-01 100.0% 80.3%
4994722 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.54 45.0 2.94e-01 94.7% 97.8%
4960303 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.54 40.0 3.73e-01 86.7% 63.2%
3590166 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.54 41.0 3.18e-01 84.0% 86.5%
3242542 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.54 39.0 2.68e-01 76.0% 47.1%
3212404 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.53 39.0 2.68e-01 77.3% 56.9%
3519451 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.53 43.0 3.57e-01 92.0% 73.8%
2774111 12.6.1.1 beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_65C 0.52 38.0 3.85e-01 78.7% 94.9%
1890046 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 45.0 3.39e-01 96.0% 68.6%
3218627 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.52 38.0 2.74e-01 76.0% 63.3%
3511755 10.1.1.1 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.50 42.0 3.21e-01 93.3% 70.6%
3235669 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 42.0 3.56e-01 92.0% 80.8%
3212555 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.50 41.0 3.48e-01 92.0% 59.2%