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KF887906.1__AHI87749.1__X__00015
Bact-VirKF887906.1__AHI87749.1__X__00015
Identity
- Accession:
- KF887906 ↗
- Kingdom:
- phage
Quality
68.8
mean pLDDT
Taxonomy
TaxID: 1460070
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-93
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wpbG01 | 1.10.287.680 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.80 | 59.0 | 6.53e-01 | 78.8% | 94.4% |
| 7t7kA01 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.65 | 53.0 | 4.37e-01 | 89.4% | 91.5% |
| 1grlB01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.64 | 51.0 | 3.59e-01 | 93.9% | 76.2% |
| 2j9wB00 | 1.20.120.1130 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain | 0.63 | 49.0 | 4.31e-01 | 84.8% | 60.6% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.53 | 44.0 | 3.70e-01 | 92.4% | 62.6% |
| 1k32A03 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.52 | 41.0 | 4.07e-01 | 87.9% | 86.1% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.52 | 33.0 | 3.00e-01 | 71.2% | 44.2% |
| 2radA03 | 1.20.1440.30 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Biosynthetic Protein domain | 0.52 | 44.0 | 3.57e-01 | 93.9% | 71.7% |
| 2pmqA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 39.0 | 3.18e-01 | 81.8% | 68.2% |
| 5is8A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.51 | 36.0 | 2.67e-01 | 77.3% | 87.9% |
| 3cqcB01 | 1.20.58.1380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 46.0 | 4.10e-01 | 98.5% | 87.8% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3219080 | 6132.1.1.0 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain | 0.72 | 56.0 | 5.21e-01 | 81.8% | 78.8% |
| 4412477 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.61 | 49.0 | 4.06e-01 | 90.9% | 65.6% |
| 158313 | 4967.1.1.2 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › RdRP_1 | 0.59 | 43.0 | 3.49e-01 | 78.8% | 48.0% |
| 3634926 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.58 | 39.0 | 3.84e-01 | 72.7% | 64.3% |
| 3689582 | 101.1.1.337 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GATA_AreA | 0.57 | 44.0 | 4.30e-01 | 86.4% | 81.3% |
| 3233029 | 3711.1.1.24 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF4473 | 0.56 | 42.0 | 3.97e-01 | 84.8% | 67.1% |
| 4341411 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.55 | 50.0 | 4.87e-01 | 100.0% | 97.3% |
| 3217799 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.53 | 43.0 | 4.23e-01 | 100.0% | 85.3% |
| 3600611 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.51 | 42.0 | 3.69e-01 | 92.4% | 66.0% |
| 3185258 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.51 | 40.0 | 3.60e-01 | 84.8% | 67.8% |
| 3330447 | 219.1.1.91 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › EDR1 | 0.50 | 41.0 | 2.96e-01 | 95.5% | 63.7% |