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KF926093.1__AHC94083.1__T548_0005__00005
Bact-VirKF926093.1__AHC94083.1__T548_0005__00005
Identity
- Accession:
- KF926093 ↗
- Kingdom:
- phage
Quality
66.9
mean pLDDT
Taxonomy
TaxID: 1412875
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-118
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vddA03 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.68 | 46.0 | 5.07e-01 | 83.8% | 87.0% |
| 2fqxA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 42.0 | 4.05e-01 | 83.8% | 59.5% |
| 3qi7A02 | 3.40.50.11390 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 49.0 | 4.39e-01 | 92.3% | 61.7% |
| 3gbvA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 42.0 | 3.95e-01 | 84.6% | 59.3% |
| 2jwkA00 | 3.30.420.270 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.60 | 35.0 | 4.31e-01 | 85.5% | 93.2% |
| 6n8eA04 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 44.0 | 3.47e-01 | 84.6% | 37.6% |
| 3qq5A02 | 3.40.50.11420 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 40.0 | 4.13e-01 | 88.9% | 75.2% |
| 4gw3A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 43.0 | 3.31e-01 | 86.3% | 32.7% |
| 3lwbA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 40.0 | 4.17e-01 | 84.6% | 78.2% |
| 4p1zA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 40.0 | 3.93e-01 | 86.3% | 67.7% |
| 4rweA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 39.0 | 3.82e-01 | 86.3% | 65.6% |
| 2i3dB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 43.0 | 3.56e-01 | 84.6% | 46.1% |
| 3ldhA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 43.0 | 3.90e-01 | 84.6% | 81.5% |
| 2h29A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 43.0 | 3.69e-01 | 84.6% | 66.0% |
| 3r7wA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 39.0 | 3.43e-01 | 78.6% | 95.1% |
| 3p26A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 40.0 | 3.30e-01 | 82.9% | 85.1% |
| 5ck3F00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 40.0 | 3.76e-01 | 82.1% | 81.0% |
| 1c41A00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.52 | 43.0 | 3.92e-01 | 92.3% | 67.9% |
| 7q4iA01 | 3.90.550.50 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.52 | 42.0 | 3.36e-01 | 89.7% | 69.8% |
| 7kx9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 40.0 | 3.74e-01 | 88.9% | 66.7% |
| 4a8jF00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 46.0 | 3.61e-01 | 100.0% | 58.8% |
| 4qlaB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 41.0 | 2.90e-01 | 86.3% | 26.3% |
| 1shuX00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.52 | 42.0 | 3.64e-01 | 87.2% | 72.4% |
| 4yj6A00 | 3.90.1300.10 | Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain | 0.51 | 45.0 | 3.01e-01 | 98.3% | 89.2% |
| 2j0aA00 | 3.90.550.50 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.51 | 41.0 | 3.27e-01 | 87.2% | 67.1% |
| 2ap9B00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.51 | 44.0 | 3.37e-01 | 97.4% | 61.3% |
| 4pxyA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 39.0 | 3.11e-01 | 82.1% | 91.4% |
| 2yc4C00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 38.0 | 3.40e-01 | 80.3% | 85.9% |
| 1khtB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 37.0 | 3.23e-01 | 77.8% | 96.3% |
| 1s2gB00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 39.0 | 3.52e-01 | 83.8% | 59.9% |
| 6yu8A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 42.0 | 3.30e-01 | 92.3% | 50.6% |
| 4c2jA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.50 | 44.0 | 3.68e-01 | 98.3% | 97.1% |
| 4dddA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 35.0 | 3.20e-01 | 72.6% | 92.6% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3607931 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.62 | 55.0 | 4.61e-01 | 100.0% | 57.1% |
| 3257355 | 2007.1.5.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like | 0.61 | 52.0 | 5.11e-01 | 91.5% | 95.2% |
| 3288878 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.61 | 43.0 | 4.08e-01 | 84.6% | 60.0% |
| 1147798 | 2007.1.2.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF3798 | 0.60 | 49.0 | 4.42e-01 | 92.3% | 62.8% |
| 4543360 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.60 | 36.0 | 3.77e-01 | 84.6% | 63.6% |
| 4445770 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.59 | 51.0 | 3.68e-01 | 94.9% | 54.9% |
| 5066797 | 2004.1.1.1217 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7125 | 0.58 | 53.0 | 4.07e-01 | 98.3% | 61.2% |
| 3632222 | 7570.1.1.4 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › PF27239 | 0.57 | 52.0 | 4.52e-01 | 100.0% | 89.4% |
| 3174565 | 2007.1.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › Asp_Glu_race | 0.57 | 44.0 | 4.40e-01 | 88.0% | 80.0% |
| 3539763 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.57 | 42.0 | 3.80e-01 | 88.0% | 55.6% |
| 5029493 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.57 | 45.0 | 3.90e-01 | 84.6% | 54.6% |
| 4927509 | 2007.1.14.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like | 0.56 | 41.0 | 4.20e-01 | 92.3% | 80.0% |
| 4106493 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.55 | 34.0 | 3.49e-01 | 97.4% | 63.6% |
| None | — | 0.55 | 43.0 | 3.29e-01 | 82.9% | 83.0% | |
| 3729201 | 2007.1.5.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like | 0.55 | 44.0 | 3.96e-01 | 88.9% | 81.8% |
| 5023427 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.55 | 49.0 | 4.59e-01 | 100.0% | 97.9% |
| 3389915 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.54 | 47.0 | 4.35e-01 | 94.9% | 82.1% |
| 4947852 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.53 | 43.0 | 3.99e-01 | 88.0% | 71.2% |
| 3711667 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.53 | 42.0 | 3.65e-01 | 84.6% | 71.6% |
| 3613496 | 2007.9.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain | 0.53 | 41.0 | 3.54e-01 | 82.1% | 93.0% |
| 3698340 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.53 | 43.0 | 3.10e-01 | 85.5% | 34.5% |
| 3383348 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.53 | 43.0 | 3.84e-01 | 88.9% | 61.8% |
| 3405128 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.53 | 41.0 | 3.67e-01 | 88.9% | 58.2% |
| 3374636 | 2004.1.1.47 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › G-alpha | 0.53 | 42.0 | 3.21e-01 | 85.5% | 62.5% |
| 3896526 | 2004.1.1.54 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Septin | 0.53 | 41.0 | 3.05e-01 | 82.9% | 70.5% |
| 3616325 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.53 | 39.0 | 3.62e-01 | 88.9% | 58.7% |
| 3586624 | 7590.1.1.6 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid | 0.53 | 39.0 | 3.58e-01 | 88.9% | 57.0% |
| 2617273 | 2007.1.20.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Dehydratase-like › ILVD_EDD | 0.52 | 46.0 | 4.15e-01 | 97.4% | 84.4% |
| 4453425 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.52 | 39.0 | 3.35e-01 | 81.2% | 91.2% |
| 4209651 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.52 | 32.0 | 3.29e-01 | 83.8% | 61.7% |
| 5039784 | 2002.1.1.90 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR | 0.52 | 46.0 | 3.38e-01 | 98.3% | 95.9% |
| None | — | 0.52 | 40.0 | 3.54e-01 | 82.9% | 99.4% | |
| 1699912 | 7552.1.1.1 ↗ | a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase | 0.51 | 45.0 | 3.01e-01 | 98.3% | 89.2% |
| 5023799 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 45.0 | 4.02e-01 | 100.0% | 75.4% |
| 3356490 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.51 | 40.0 | 3.57e-01 | 82.1% | 93.9% |
| 3517931 | 7516.1.1.12 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Fringe | 0.51 | 42.0 | 3.31e-01 | 88.9% | 72.0% |
| 4153941 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.51 | 46.0 | 4.47e-01 | 100.0% | 97.0% |
| 5069537 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.51 | 45.0 | 3.61e-01 | 98.3% | 60.8% |
| 5036001 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.51 | 44.0 | 3.43e-01 | 95.7% | 60.4% |
| 5049407 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.51 | 40.0 | 3.38e-01 | 84.6% | 71.6% |
| 4028404 | 3331.1.1.18 ↗ | a+b two layers › Uncharacterized protein yibL › Uncharacterized protein yibL › Uncharacterized protein yibL › PF31181 | 0.51 | 40.0 | 2.97e-01 | 84.6% | 39.4% |
| 3515117 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.51 | 40.0 | 3.31e-01 | 84.6% | 70.5% |
| 3278932 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.51 | 45.0 | 3.85e-01 | 98.3% | 74.6% |
| 4979211 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.50 | 39.0 | 3.43e-01 | 82.9% | 93.9% |
| 5055351 | 2007.1.11.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains | 0.50 | 39.0 | 3.73e-01 | 82.1% | 96.3% |
| 5027226 | 7576.1.1.0 ↗ | a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain | 0.50 | 39.0 | 3.26e-01 | 83.8% | 76.7% |
D2
high
residues 124-175