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KF929199.1__AHG24016.1__SEP9_095__00100

Bact-Vir

KF929199.1__AHG24016.1__SEP9_095__00100

Identity

Accession:
KF929199 ↗
Kingdom:
phage

Quality

89.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-50
PDB
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 65.0 5.74e-01 97.6% 82.3%
2vqeL00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 61.0 4.40e-01 92.7% 56.5%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.76 60.0 5.45e-01 95.1% 67.2%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 57.0 4.59e-01 82.9% 43.6%
6jy5B00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.75 61.0 4.92e-01 92.7% 89.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 62.0 5.57e-01 100.0% 79.0%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 63.0 5.40e-01 97.6% 97.0%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 4.95e-01 97.6% 66.7%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 55.0 4.59e-01 92.7% 88.6%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 55.0 4.79e-01 97.6% 67.6%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 51.0 4.64e-01 82.9% 60.7%
2k4rA00 2.40.20.10 Mainly Beta › Beta Barrel › Plasminogen Kringle 4 › Plasminogen Kringle 4 0.67 55.0 4.65e-01 100.0% 85.7%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 53.0 5.06e-01 92.7% 98.0%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 50.0 2.93e-01 90.2% 32.9%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 50.0 3.41e-01 90.2% 41.1%
3g7nB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.65 54.0 3.38e-01 100.0% 87.9%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 50.0 3.69e-01 90.2% 69.7%
3uueA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.65 55.0 3.37e-01 100.0% 85.3%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 50.0 4.22e-01 95.1% 81.7%
2fgeA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.64 53.0 3.33e-01 100.0% 92.8%
1b98A00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.64 43.0 3.28e-01 70.7% 45.6%
3l8kA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 47.0 3.51e-01 90.2% 67.7%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.62 49.0 3.19e-01 100.0% 29.9%
6cxhA03 2.60.40.1580 Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 0.61 48.0 3.46e-01 92.7% 81.6%
1xvsA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.61 46.0 3.45e-01 87.8% 65.0%
3oxhA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.61 46.0 3.27e-01 87.8% 26.3%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.60 50.0 3.81e-01 100.0% 97.2%
3oxhA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.60 45.0 3.40e-01 87.8% 33.3%
7tzoA01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.60 44.0 3.07e-01 90.2% 33.3%
2ls0101 2.40.50.670 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Target recognition domain of lytic exoenzyme 0.60 46.0 3.53e-01 95.1% 39.5%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 44.0 3.56e-01 92.7% 99.0%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.59 47.0 3.48e-01 95.1% 100.0%
1y79101 1.10.1370.40 Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › 0.59 47.0 2.83e-01 100.0% 26.1%
3sokB00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.59 44.0 3.26e-01 95.1% 76.1%
2rbbA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 44.0 3.19e-01 85.4% 28.7%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.58 45.0 4.13e-01 90.2% 70.2%
3l20A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 42.0 2.92e-01 82.9% 22.7%
1x49A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 42.0 3.84e-01 95.1% 84.3%
4dsdA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.57 45.0 3.37e-01 100.0% 42.1%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 45.0 3.21e-01 100.0% 68.8%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.57 44.0 3.59e-01 97.6% 83.0%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.57 44.0 4.10e-01 95.1% 93.1%
3bqxA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 41.0 2.99e-01 85.4% 26.6%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 44.0 3.94e-01 95.1% 66.7%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 45.0 3.45e-01 95.1% 49.5%
2qh0A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 41.0 3.11e-01 90.2% 32.6%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 42.0 3.48e-01 95.1% 62.8%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 44.0 3.79e-01 95.1% 54.8%
4b63A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 44.0 2.59e-01 97.6% 39.5%
3b59A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.55 41.0 3.10e-01 87.8% 33.1%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.55 41.0 3.19e-01 92.7% 75.0%
2p25A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.55 43.0 3.32e-01 100.0% 82.4%
4wyqB00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 40.0 3.59e-01 95.1% 78.7%
4v1ap00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 42.0 3.42e-01 95.1% 84.5%
2pjsA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 42.0 3.30e-01 90.2% 38.2%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 40.0 3.68e-01 95.1% 79.1%
3k2tA01 3.30.505.50 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain 0.53 36.0 3.56e-01 70.7% 63.0%
2qntA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 38.0 2.92e-01 87.8% 29.3%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.53 39.0 3.51e-01 90.2% 53.6%
5iryA05 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.53 39.0 3.32e-01 90.2% 81.2%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.53 42.0 3.48e-01 100.0% 75.6%
4qmgC01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 44.0 3.01e-01 100.0% 47.8%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.53 38.0 2.89e-01 82.9% 75.0%
3itwA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.52 39.0 3.67e-01 90.2% 67.9%
2a9sB00 3.90.950.20 Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like 0.52 41.0 2.89e-01 100.0% 73.3%
3r4qA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 38.0 2.88e-01 90.2% 79.5%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 38.0 3.65e-01 100.0% 81.4%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 40.0 3.60e-01 92.7% 61.2%
2i7rA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 40.0 3.06e-01 90.2% 80.7%
2ei0A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 41.0 2.89e-01 92.7% 27.6%
1x9lA01 2.60.40.1890 Mainly Beta › Sandwich › Immunoglobulin-like › PCu(A)C copper chaperone 0.51 38.0 2.91e-01 90.2% 82.1%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 37.0 2.27e-01 92.7% 57.0%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.50 36.0 2.79e-01 90.2% 90.8%
3e5dA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.50 37.0 2.93e-01 100.0% 80.0%
1o75A03 2.60.40.1300 Mainly Beta › Sandwich › Immunoglobulin-like › Penicillin-binding protein Tp47, domain C 0.50 35.0 2.78e-01 90.2% 81.2%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4519674 4.1.1.186 beta barrels › SH3 › SH3 › SH3 › DUF5397 0.86 74.0 6.67e-01 100.0% 84.5%
3886492 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.83 73.0 5.99e-01 100.0% 89.3%
3584335 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.82 62.0 6.55e-01 85.4% 97.1%
5052257 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 70.0 6.24e-01 100.0% 75.0%
3600498 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.82 69.0 3.96e-01 95.1% 23.3%
3699366 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.80 67.0 4.02e-01 95.1% 30.0%
3742938 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.80 67.0 5.84e-01 97.6% 78.5%
3539349 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.78 66.0 4.00e-01 95.1% 26.0%
4931822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 65.0 5.74e-01 100.0% 69.2%
3564972 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 67.0 5.67e-01 100.0% 71.4%
3204055 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.77 62.0 5.42e-01 92.7% 61.5%
3927411 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.77 63.0 6.16e-01 92.7% 91.1%
3703749 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 63.0 5.59e-01 100.0% 72.3%
3396897 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.77 65.0 5.73e-01 100.0% 90.5%
4605602 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 63.0 5.53e-01 97.6% 73.8%
4241924 4.1.1.93 beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.76 63.0 4.99e-01 97.6% 52.2%
4528717 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.76 65.0 5.52e-01 100.0% 82.6%
4012257 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 61.0 4.48e-01 92.7% 61.4%
4284709 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.75 63.0 5.84e-01 100.0% 78.2%
3679362 4.1.1.351 beta barrels › SH3 › SH3 › SH3 › SH3_ISE2 0.75 63.0 5.07e-01 100.0% 94.1%
1549576 2.1.1.1 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.74 59.0 4.18e-01 92.7% 51.1%
5082700 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.74 58.0 3.37e-01 90.2% 26.1%
2464247 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.73 58.0 5.14e-01 95.1% 60.6%
3694693 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.73 58.0 5.14e-01 95.1% 63.1%
5050497 2003.1.3.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 0.72 57.0 3.06e-01 90.2% 12.3%
3735588 2003.1.2.111 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like, Lys_Orn_oxgnase 0.72 56.0 3.16e-01 90.2% 24.2%
3411042 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 60.0 5.41e-01 97.6% 88.3%
4969515 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.72 56.0 3.23e-01 90.2% 24.2%
4029617 5.1.11.39 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DUF7899 0.72 56.0 3.22e-01 92.7% 13.7%
3941152 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 58.0 5.08e-01 95.1% 61.5%
3197575 2.1.1.1 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.72 58.0 4.59e-01 92.7% 67.8%
3579710 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.70 54.0 4.20e-01 95.1% 75.2%
2502534 2.1.1.1 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.69 56.0 4.47e-01 92.7% 62.1%
3961395 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.69 53.0 3.00e-01 90.2% 23.9%
3573585 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 54.0 5.09e-01 92.7% 72.2%
3991073 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 55.0 5.11e-01 95.1% 74.5%
4524858 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.69 53.0 3.01e-01 90.2% 25.6%
4945674 2.1.1.252 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2_C 0.69 56.0 4.74e-01 92.7% 64.3%
3689390 2003.1.2.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.69 52.0 2.94e-01 90.2% 22.7%
3962341 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.68 51.0 3.44e-01 90.2% 64.7%
3639262 2003.1.2.103 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Prenylcys_lyase, NAD_binding_8 0.68 51.0 2.99e-01 90.2% 63.7%
5039189 2.1.1.287 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Zn_ribbon_TiaS 0.68 53.0 3.67e-01 92.7% 75.5%
3488884 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 53.0 4.32e-01 92.7% 80.0%
4020029 2003.1.3.26 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FMO-like, NAD_binding_8 0.67 51.0 2.88e-01 90.2% 24.1%
5043745 2.1.1.287 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Zn_ribbon_TiaS 0.67 52.0 3.54e-01 92.7% 75.0%
3736330 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.67 51.0 2.86e-01 90.2% 22.2%
4985754 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.67 53.0 4.05e-01 87.8% 45.3%
3273846 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 55.0 3.35e-01 100.0% 20.7%
3709493 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 54.0 3.83e-01 92.7% 33.8%
3733286 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.66 51.0 3.14e-01 90.2% 44.1%
3929340 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.66 50.0 3.56e-01 90.2% 65.5%
3933293 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.65 49.0 4.60e-01 92.7% 65.5%
5018124 9.2.1.0 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin 0.64 54.0 4.35e-01 100.0% 85.9%
3787501 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.64 49.0 3.53e-01 92.7% 97.9%
1883336 1104.1.1.1 a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 0.64 53.0 3.72e-01 100.0% 44.1%
3966441 4.21.1.0 beta barrels › SH3 › ImpE-like › ImpE-like 0.64 50.0 3.34e-01 90.2% 40.0%
3975726 4.21.1.1 beta barrels › SH3 › ImpE-like › ImpE-like › ImpE 0.64 49.0 3.33e-01 90.2% 41.2%
3687350 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 49.0 4.67e-01 97.6% 87.3%
4315771 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.63 49.0 4.33e-01 92.7% 69.2%
3415836 209.1.1.0 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.62 51.0 3.92e-01 97.6% 67.6%
3298962 2003.1.3.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_3 0.62 46.0 3.05e-01 90.2% 53.8%
5080202 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.62 50.0 3.72e-01 100.0% 45.6%
3507420 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 49.0 3.91e-01 95.1% 53.7%
3203020 2003.1.3.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_binding_3, Pyr_redox_3 0.61 49.0 3.18e-01 97.6% 52.3%
4208450 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 48.0 4.35e-01 92.7% 75.0%
5068388 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.61 47.0 4.41e-01 92.7% 81.8%
None 0.60 47.0 3.12e-01 90.2% 49.5%
3396910 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.60 47.0 3.22e-01 97.6% 97.8%
3584039 5.1.5.89 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 0.60 49.0 2.83e-01 95.1% 15.9%
4623446 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.59 47.0 3.49e-01 97.6% 50.0%
4114145 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 43.0 3.24e-01 92.7% 34.6%
3288005 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.58 42.0 3.07e-01 87.8% 26.2%
141162 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.57 42.0 3.58e-01 82.9% 47.3%
5065184 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 40.0 4.04e-01 90.2% 86.7%
5056572 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.55 40.0 2.55e-01 90.2% 13.4%
3199170 223.2.1.9 a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.55 41.0 2.85e-01 85.4% 67.3%
3288258 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.54 39.0 2.93e-01 85.4% 28.5%
5002178 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.54 39.0 3.76e-01 80.5% 70.0%
1411292 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 41.0 3.19e-01 100.0% 43.5%
4456732 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.54 37.0 3.29e-01 87.8% 43.8%
3606311 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 39.0 3.42e-01 90.2% 58.7%
4928229 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.53 40.0 2.98e-01 82.9% 33.6%
3887124 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 38.0 2.70e-01 87.8% 33.1%
3881397 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.52 37.0 3.56e-01 87.8% 90.9%
4349950 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.52 41.0 3.72e-01 95.1% 95.0%
2104079 244.4.1.4 a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › PF27537 0.51 37.0 3.68e-01 85.4% 91.1%
4284100 211.1.1.5 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_2 0.51 37.0 3.52e-01 87.8% 69.1%
4119875 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 40.0 3.61e-01 95.1% 87.7%
4029169 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.51 36.0 2.08e-01 82.9% 6.4%
3638434 76.1.1.0 beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I 0.51 37.0 2.84e-01 90.2% 76.0%
168811 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.51 38.0 3.43e-01 90.2% 58.5%
D2 high residues 56-143
PDB
D3 high residues 154-192
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 67.0 5.70e-01 82.1% 55.7%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 61.0 6.19e-01 82.1% 82.1%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.78 61.0 5.12e-01 87.2% 74.6%
6hn7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 5.18e-01 92.3% 73.6%
1x9nA01 1.10.3260.10 Mainly Alpha › Orthogonal Bundle › DNA ligase i, domain 1 › DNA ligase, ATP-dependent, N-terminal domain 0.75 60.0 3.58e-01 89.7% 17.8%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.75 57.0 4.04e-01 87.2% 39.7%
2ox6D00 1.10.3100.10 Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein 0.73 64.0 4.11e-01 100.0% 23.0%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 4.83e-01 87.2% 62.5%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.72 54.0 4.55e-01 87.2% 69.4%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 63.0 4.99e-01 100.0% 57.1%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 63.0 5.23e-01 100.0% 62.1%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 62.0 5.27e-01 100.0% 68.3%
2ltuA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.69 51.0 4.45e-01 82.1% 56.5%
4bfmA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.69 55.0 3.25e-01 92.3% 92.7%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 61.0 4.79e-01 100.0% 55.7%
7xi5A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 62.0 5.63e-01 100.0% 78.4%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 59.0 4.65e-01 100.0% 53.1%
2kvvA00 1.10.1660.60 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Putative excisionased domain DUF1233 0.66 49.0 4.17e-01 92.3% 74.4%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 53.0 4.04e-01 100.0% 43.7%
5ekdA02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.64 52.0 3.89e-01 94.9% 59.5%
2iw3A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 50.0 3.22e-01 94.9% 28.3%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3278372 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.84 68.0 5.71e-01 89.7% 75.4%
4950846 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.81 63.0 5.83e-01 84.6% 94.0%
3290494 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.81 67.0 6.17e-01 92.3% 98.0%
5007668 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.80 60.0 4.23e-01 84.6% 38.4%
3951460 101.30.1.3 alpha arrays › HTH › Rv2175c › Rv2175c › Rv2175c_wHTH 0.79 64.0 4.84e-01 89.7% 56.7%
5070666 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 60.0 5.46e-01 89.7% 90.9%
4061721 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.75 58.0 4.07e-01 87.2% 39.2%
None 0.75 60.0 4.81e-01 89.7% 64.9%
3752995 331.4.1.28 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › AMPK_alpha_AID 0.75 54.0 3.89e-01 79.5% 28.7%
3966930 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.75 59.0 4.34e-01 92.3% 43.6%
3849281 103.1.1.21 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › AMPK_alpha_AID 0.75 54.0 3.89e-01 79.5% 28.7%
4982623 4095.1.1.1 alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.75 58.0 4.68e-01 89.7% 60.0%
4334333 101.1.9.1 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR,MerR-DNA-bind 0.74 59.0 4.07e-01 92.3% 34.3%
3281621 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.74 58.0 5.31e-01 92.3% 92.7%
3222360 103.1.1.21 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › AMPK_alpha_AID 0.72 58.0 5.57e-01 97.4% 77.8%
4929856 101.1.9.18 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 0.72 56.0 4.36e-01 89.7% 52.2%
5035857 101.1.7.1 alpha arrays › HTH › HTH › Methylated DNA-protein cysteine methyltransferase-C › DNA_binding_1 0.72 56.0 5.26e-01 89.7% 76.0%
3291061 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.71 53.0 3.89e-01 84.6% 44.3%
4008376 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.70 54.0 4.76e-01 87.2% 86.7%
1030234 103.1.1.21 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › AMPK_alpha_AID 0.69 51.0 4.45e-01 82.1% 56.5%
3702243 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.69 54.0 4.87e-01 97.4% 61.8%
5057753 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 61.0 4.73e-01 100.0% 50.6%
1844183 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.69 52.0 3.70e-01 87.2% 35.6%
None 0.69 62.0 5.32e-01 100.0% 73.3%
3972208 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 62.0 4.92e-01 100.0% 57.3%
5046258 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 61.0 4.89e-01 100.0% 57.3%
4032323 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 62.0 5.14e-01 100.0% 66.2%
5030212 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 61.0 5.03e-01 100.0% 62.9%
3971534 101.1.4.2 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › LacI 0.67 51.0 4.35e-01 84.6% 60.0%
4117084 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.67 52.0 4.02e-01 92.3% 57.0%
3283719 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.66 51.0 4.59e-01 84.6% 67.3%
3240617 101.15.1.0 alpha arrays › HTH › LysM domain › LysM domain 0.66 53.0 4.76e-01 97.4% 78.3%
D4 medium residues 201-240
PDB
D5 medium residues 249-289
PDB