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KF929199.1AHG24027.1SEP9_104__00111

Bact-Vir

KF929199.1__AHG24027.1__SEP9_104__00111

Identity

Accession:: KF929199 ↗
Kingdom:: phage

Quality

85.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sextaecvirus› Staphylococcus_phage_vB_SepS_SEP9

TaxID: 1434319

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-82_163-183

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23864.2 best	DUF7222	68.5	7.70e-19	61.2%	52.8%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3iwfB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.73	46.0	4.95e-01	99.0%	74.2%
2o3fA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.71	45.0	4.99e-01	100.0%	80.5%
4ivnA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.68	44.0	5.03e-01	98.1%	89.5%
5fgmA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.57	35.0	4.13e-01	96.1%	98.5%
2rgoB03	1.10.8.870	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Alpha-glycerophosphate oxidase, cap domain	0.56	36.0	3.53e-01	93.2%	59.8%
3mpxA01	1.20.900.10	Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain	0.53	46.0	3.66e-01	94.2%	81.1%
2mtqA00	1.20.58.130	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.51	30.0	3.51e-01	76.7%	82.2%
6jlzA01	1.20.120.1070	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain	0.51	34.0	3.43e-01	85.4%	66.7%
5kbwB00	1.10.1760.20	Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 ›	0.51	44.0	3.79e-01	99.0%	70.2%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2739320	109.4.1.92 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.57	37.0	2.91e-01	100.0%	31.0%
3711198	650.1.1.1 ↗	alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ	0.56	34.0	3.74e-01	84.5%	72.9%
3628940	3755.1.1.0 ↗	alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related	0.55	31.0	3.08e-01	100.0%	51.8%

D2 medium residues 83-162

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1v66A00	1.10.720.30	Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain	0.60	42.0	4.60e-01	87.5%	89.2%
3q23A04	6.10.140.1370	Special › Helix non-globular › Helix Hairpins ›	0.59	40.0	3.89e-01	71.2%	62.6%
2fdrA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.54	32.0	3.47e-01	93.8%	70.1%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3512653	130.1.1.2 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM	0.58	39.0	4.41e-01	87.5%	100.0%
3481487	193.1.1.0 ↗	alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like	0.56	41.0	3.90e-01	78.8%	95.8%
3277871	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.54	32.0	3.36e-01	92.5%	64.3%
3476005	524.1.1.0 ↗	alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p	0.52	44.0	3.75e-01	100.0%	57.2%