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KF971864.1__AHJ10634.1__phi191_00038__00038

Bact-Vir

KF971864.1__AHJ10634.1__phi191_00038__00038

Identity

Accession:
KF971864 ↗
Kingdom:
phage

Quality

84.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-71
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10065.15 best DUF2303 42.2 8.50e-11 100.0% 20.4%
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vgiA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.76 51.0 3.25e-01 78.9% 14.8%
3ammA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.74 51.0 3.27e-01 80.7% 16.1%
6ko5A02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.67 57.0 3.67e-01 100.0% 40.4%
3thxB04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.66 52.0 4.05e-01 87.7% 89.8%
2vlgC00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.65 47.0 3.90e-01 84.2% 43.1%
3hssA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.61 48.0 3.11e-01 87.7% 26.6%
4hstB02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.61 40.0 3.80e-01 70.2% 55.9%
2yh6D00 3.30.530.50 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.61 43.0 3.55e-01 75.4% 44.5%
4egwA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.61 37.0 2.89e-01 78.9% 26.0%
3gw6D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 3.53e-01 89.5% 77.0%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 37.0 3.62e-01 70.2% 55.4%
1z7uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 48.0 4.03e-01 96.5% 80.9%
3ff0A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 46.0 3.53e-01 87.7% 36.9%
6mv2A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 42.0 3.54e-01 78.9% 48.6%
1pu1A00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.57 45.0 3.89e-01 86.0% 83.5%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 39.0 3.35e-01 73.7% 76.5%
2f7sA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 51.0 3.58e-01 100.0% 50.3%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 3.88e-01 94.7% 84.8%
3cawA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 48.0 4.11e-01 94.7% 70.3%
2wz1B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.56 45.0 3.04e-01 86.0% 32.1%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.56 39.0 3.49e-01 78.9% 48.3%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 3.58e-01 84.2% 97.1%
1f0cA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.56 36.0 2.92e-01 78.9% 31.4%
1pfoA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.56 39.0 4.00e-01 84.2% 81.1%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.55 46.0 3.34e-01 91.2% 46.8%
1dpgA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 45.0 2.89e-01 96.5% 89.3%
2xzmE01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 37.0 3.06e-01 75.4% 70.7%
4f3nA00 3.40.50.12710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 41.0 2.61e-01 94.7% 85.8%
8bs9A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 39.0 2.54e-01 84.2% 86.0%
2q0oA01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.52 46.0 3.33e-01 100.0% 100.0%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 35.0 3.21e-01 71.9% 51.2%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 46.0 3.57e-01 100.0% 88.2%
2oarB00 1.10.1200.120 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 0.52 40.0 3.28e-01 93.0% 68.8%
3pqvA02 3.30.360.20 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain 0.52 36.0 3.04e-01 86.0% 43.8%
3l0aA00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.51 44.0 2.86e-01 96.5% 33.8%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 3.41e-01 94.7% 87.5%
1vwxf00 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.51 35.0 2.97e-01 73.7% 44.0%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 43.0 3.38e-01 94.7% 69.9%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.36e-01 84.2% 94.4%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.50 35.0 3.30e-01 98.2% 57.7%
5cflA02 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.50 35.0 2.73e-01 75.4% 81.0%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3693076 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.74 50.0 3.64e-01 70.2% 26.7%
4947615 3604.1.1.0 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain 0.70 51.0 4.92e-01 87.7% 67.7%
4405256 2.1.1.20 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Phage_DNA_bind 0.70 47.0 4.13e-01 70.2% 49.4%
3257603 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.70 47.0 3.63e-01 70.2% 45.8%
4593266 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.68 44.0 4.03e-01 70.2% 50.7%
5027780 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.68 42.0 4.22e-01 78.9% 60.0%
4944756 3604.1.1.0 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain 0.66 49.0 4.82e-01 82.5% 75.0%
5053323 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.66 45.0 3.63e-01 77.2% 35.7%
4932312 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.65 43.0 3.31e-01 77.2% 28.1%
3717203 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.64 40.0 2.78e-01 75.4% 18.5%
3738064 304.112.1.0 a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.64 45.0 3.69e-01 71.9% 46.0%
3992484 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 44.0 3.54e-01 75.4% 76.7%
3676791 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 42.0 3.91e-01 71.9% 53.3%
3317450 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 43.0 3.51e-01 71.9% 57.3%
3449382 3256.1.1.2 a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain › eIF3g 0.63 36.0 4.16e-01 71.9% 88.6%
3917310 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.62 42.0 4.12e-01 71.9% 63.1%
4342104 2492.1.1.2 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.62 50.0 3.56e-01 93.0% 28.6%
5077400 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.61 45.0 3.73e-01 78.9% 95.2%
3661948 1.1.11.1 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.61 42.0 3.95e-01 80.7% 57.3%
3247792 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.61 38.0 2.98e-01 84.2% 30.8%
5077445 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 49.0 3.64e-01 93.0% 60.1%
4932062 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.60 44.0 3.68e-01 78.9% 78.0%
3696407 4121.1.1.7 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › PF26616 0.59 52.0 3.45e-01 100.0% 84.3%
3356898 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.58 40.0 3.04e-01 71.9% 28.7%
2687 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.57 45.0 3.60e-01 84.2% 83.5%
3504767 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.57 38.0 3.63e-01 71.9% 55.7%
3643736 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.57 38.0 2.97e-01 70.2% 53.1%
3338778 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.57 42.0 2.89e-01 86.0% 23.6%
4057923 192.14.1.2 alpha bundles › Long alpha-hairpin › Siah interacting protein N terminal domain-like › Siah interacting protein N terminal domain-like › DUF3461 0.57 48.0 3.93e-01 100.0% 65.5%
3279656 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.57 44.0 3.53e-01 87.7% 66.7%
5042455 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.56 44.0 3.45e-01 84.2% 95.0%
4948264 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.56 46.0 4.16e-01 100.0% 67.5%
5074282 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 37.0 3.76e-01 73.7% 70.9%
3702545 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.56 48.0 2.90e-01 100.0% 20.2%
4144910 244.3.1.4 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.55 36.0 3.19e-01 87.7% 42.4%
3928618 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.55 44.0 3.56e-01 100.0% 46.7%
4158399 2492.1.1.2 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.55 43.0 3.12e-01 91.2% 29.5%
417536 11.1.1.87 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TcpF 0.55 42.0 3.40e-01 91.2% 47.0%
3862290 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.55 48.0 3.52e-01 100.0% 87.7%
4054004 244.3.1.4 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.55 35.0 3.14e-01 87.7% 40.9%
4938125 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.54 41.0 3.61e-01 82.5% 74.1%
3812138 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.54 37.0 2.79e-01 77.2% 28.0%
3352682 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.53 36.0 3.42e-01 80.7% 57.1%
4930437 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.53 41.0 3.37e-01 98.2% 45.7%
4944821 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.53 37.0 3.66e-01 73.7% 95.0%
3197363 511.1.1.0 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.53 35.0 2.78e-01 70.2% 59.3%
4964699 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.53 33.0 2.87e-01 71.9% 35.0%
3889863 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.52 44.0 3.41e-01 91.2% 55.0%
1224463 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.52 36.0 3.84e-01 98.2% 85.7%
4682079 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.52 33.0 3.02e-01 77.2% 43.5%
3400775 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.52 43.0 3.45e-01 98.2% 88.8%
3744517 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.52 45.0 3.53e-01 98.2% 68.3%
3520868 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 44.0 3.34e-01 96.5% 72.1%
3508428 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 43.0 3.10e-01 98.2% 71.7%
3759486 330.1.1.2 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 0.51 36.0 3.36e-01 98.2% 56.2%
3928653 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.51 39.0 2.82e-01 93.0% 26.7%
4938227 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.51 40.0 3.36e-01 91.2% 76.4%
3257563 101.1.1.76 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.51 37.0 3.26e-01 80.7% 49.5%
3240135 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 42.0 2.35e-01 91.2% 17.6%
3379810 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.51 33.0 3.33e-01 89.5% 65.0%
3987365 896.1.1.4 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › DDE_Tnp_IS66 0.51 33.0 3.04e-01 73.7% 47.5%
5021958 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 32.0 3.35e-01 73.7% 74.0%
3244742 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.50 45.0 2.84e-01 100.0% 28.3%