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KF977490.1__AHJ10739.1__P106B_56__00056
Bact-VirKF977490.1__AHJ10739.1__P106B_56__00056
Identity
- Accession:
- KF977490 ↗
- Kingdom:
- phage
Quality
94.1
mean pLDDT
Taxonomy
TaxID: 1458697
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-74
Domain cluster:
rep: NC_055841.1__YP_010107392.1__KNU99_gp151__00250__D4-68
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 48.0 | 5.05e-01 | 74.6% | 93.7% |
| 1in4A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 48.0 | 4.78e-01 | 77.5% | 82.2% |
| 3j7aY00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 47.0 | 3.73e-01 | 77.5% | 46.8% |
| 3mq0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 4.67e-01 | 77.5% | 72.7% |
| 5y6iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 47.0 | 4.68e-01 | 77.5% | 80.8% |
| 2doaA00 | 1.10.10.2670 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › E3 ubiquitin-protein ligase | 0.63 | 45.0 | 4.03e-01 | 76.1% | 53.8% |
| 3lsgA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 40.0 | 4.58e-01 | 91.5% | 97.9% |
| 4mtdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 44.0 | 4.20e-01 | 77.5% | 70.5% |
| 3goxA02 | 3.30.60.130 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.62 | 41.0 | 4.71e-01 | 80.3% | 90.7% |
| 1stzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 44.0 | 4.22e-01 | 77.5% | 76.5% |
| 2l4mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 44.0 | 4.44e-01 | 77.5% | 82.6% |
| 2zetC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 40.0 | 3.19e-01 | 93.0% | 35.5% |
| 1zbdB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 42.0 | 3.40e-01 | 91.5% | 43.1% |
| 6qv3A05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 41.0 | 3.83e-01 | 77.5% | 92.5% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 40.0 | 3.40e-01 | 74.6% | 76.4% |
| 2hs5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 4.05e-01 | 77.5% | 89.6% |
| 1ul4A01 | 4.10.1100.10 | Few Secondary Structures › Irregular › DNA-binding domain of squamosa promoter binding protein-like 12 (lacking the second zinc- binding site) › Transcription factor, SBP-box domain | 0.55 | 38.0 | 3.95e-01 | 71.8% | 96.9% |
| 3zq7A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 41.0 | 3.70e-01 | 91.5% | 58.4% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.97e-01 | 94.4% | 78.8% |
| 4fx5A03 | 1.20.120.1690 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 37.0 | 3.37e-01 | 77.5% | 58.0% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8199 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.84 | 40.0 | 5.62e-01 | 98.6% | 100.0% |
| 5016275 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.82 | 40.0 | 5.49e-01 | 98.6% | 97.1% |
| 4957868 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.80 | 39.0 | 5.41e-01 | 98.6% | 97.1% |
| 4930892 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.79 | 39.0 | 4.78e-01 | 98.6% | 75.6% |
| 4998890 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.79 | 38.0 | 4.78e-01 | 98.6% | 75.6% |
| 5008357 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.78 | 38.0 | 5.17e-01 | 98.6% | 97.1% |
| 4442858 | 931.1.1.15 ↗ | few secondary structure elements › Metallothionein › Metallothionein › Metallothionein › PF26927 | 0.73 | 37.0 | 4.84e-01 | 98.6% | 97.1% |
| 4929415 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.70 | 43.0 | 4.71e-01 | 100.0% | 75.0% |
| 5042937 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.68 | 44.0 | 4.97e-01 | 97.2% | 85.5% |
| 3687343 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 47.0 | 5.05e-01 | 73.2% | 91.4% |
| 3881136 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.67 | 41.0 | 4.86e-01 | 93.0% | 90.0% |
| 3696810 | 101.1.2.251 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6581 | 0.67 | 48.0 | 3.67e-01 | 77.5% | 34.7% |
| 3701353 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 48.0 | 4.80e-01 | 78.9% | 84.0% |
| 3547416 | 376.1.3.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_CARP1-2 | 0.65 | 43.0 | 4.82e-01 | 93.0% | 87.3% |
| 3554759 | 376.1.3.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_CARP1-2 | 0.65 | 43.0 | 4.69e-01 | 93.0% | 81.7% |
| 3717537 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.65 | 42.0 | 4.65e-01 | 95.8% | 85.5% |
| 4679974 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.64 | 46.0 | 4.55e-01 | 77.5% | 81.3% |
| 3718357 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.64 | 40.0 | 4.78e-01 | 91.5% | 100.0% |
| 5025917 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.64 | 45.0 | 4.67e-01 | 76.1% | 95.4% |
| 3472338 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.63 | 43.0 | 4.68e-01 | 93.0% | 83.3% |
| 3478913 | 376.1.3.4 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_2 | 0.63 | 43.0 | 4.04e-01 | 93.0% | 58.8% |
| 3593170 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 49.0 | 4.88e-01 | 87.3% | 97.3% |
| 3900403 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.62 | 42.0 | 4.69e-01 | 93.0% | 89.1% |
| 4995114 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 44.0 | 4.06e-01 | 77.5% | 69.5% |
| 3720602 | 101.1.2.359 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD | 0.61 | 43.0 | 4.24e-01 | 77.5% | 75.0% |
| 5009381 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 45.0 | 4.61e-01 | 93.0% | 84.3% |
| 3493997 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.60 | 42.0 | 4.21e-01 | 74.6% | 80.0% |
| 5001950 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.60 | 48.0 | 3.25e-01 | 85.9% | 97.6% |
| 4026548 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.59 | 42.0 | 3.82e-01 | 76.1% | 60.0% |
| 3307915 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.58 | 45.0 | 4.71e-01 | 100.0% | 89.2% |
| 3511958 | 509.1.1.9 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH_ZNF598 | 0.58 | 49.0 | 4.14e-01 | 94.4% | 55.8% |
| 5021067 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 41.0 | 3.74e-01 | 77.5% | 61.0% |
| 3252019 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 41.0 | 3.97e-01 | 74.6% | 72.5% |
| 3970023 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 46.0 | 4.53e-01 | 94.4% | 80.0% |
| 3599746 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 42.0 | 4.03e-01 | 78.9% | 76.5% |
| 1877267 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 32.0 | 2.59e-01 | 73.2% | 26.0% |
| 3506139 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.57 | 41.0 | 3.79e-01 | 84.5% | 60.0% |
| 3466575 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.56 | 42.0 | 4.41e-01 | 97.2% | 87.7% |
| 3579332 | 4156.1.1.2 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C | 0.56 | 40.0 | 3.01e-01 | 78.9% | 29.0% |
| 4985634 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.53 | 42.0 | 4.49e-01 | 91.5% | 95.2% |
| 2117616 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.53 | 34.0 | 3.74e-01 | 94.4% | 79.7% |
| 3591885 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 40.0 | 3.10e-01 | 88.7% | 83.8% |
| 4946657 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.51 | 43.0 | 4.48e-01 | 97.2% | 98.5% |
| 3398155 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.51 | 36.0 | 2.99e-01 | 73.2% | 63.2% |