←Back to structures
KF977490.1__AHJ10770.1__P106B_87__00087
Bact-VirKF977490.1__AHJ10770.1__P106B_87__00087
Identity
- Accession:
- KF977490 ↗
- Kingdom:
- phage
Quality
92.7
mean pLDDT
Taxonomy
TaxID: 1458697
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-97
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.68 | 46.0 | 3.50e-01 | 70.8% | 88.5% |
| 4h61A00 | 3.10.450.580 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mediator complex, subunit Med6 | 0.66 | 38.0 | 3.40e-01 | 74.0% | 40.1% |
| 2f4wB00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.65 | 48.0 | 4.16e-01 | 78.1% | 84.2% |
| 2v1lA00 | 3.10.450.430 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF2787 | 0.63 | 48.0 | 4.34e-01 | 80.2% | 79.8% |
| 6t5kC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.63 | 43.0 | 3.31e-01 | 70.8% | 88.8% |
| 6nyoA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.60 | 48.0 | 3.86e-01 | 85.4% | 88.8% |
| 3v98A03 | 3.10.450.60 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 43.0 | 4.01e-01 | 72.9% | 67.2% |
| 1vhzA01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 46.0 | 3.76e-01 | 82.3% | 79.8% |
| 4bq6F00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.59 | 45.0 | 3.94e-01 | 82.3% | 89.9% |
| 2lpuA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 43.0 | 3.78e-01 | 79.2% | 77.7% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 40.0 | 3.54e-01 | 75.0% | 61.8% |
| 1yf9A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.56 | 38.0 | 3.30e-01 | 70.8% | 90.5% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.55 | 27.0 | 3.26e-01 | 84.4% | 70.5% |
| 2g2sA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.54 | 31.0 | 3.63e-01 | 74.0% | 82.8% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.54 | 40.0 | 3.86e-01 | 80.2% | 100.0% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 41.0 | 3.10e-01 | 84.4% | 96.9% |
| 4akmB00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 43.0 | 3.65e-01 | 86.5% | 57.3% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 38.0 | 3.26e-01 | 75.0% | 75.2% |
| 4pj2A00 | 2.40.128.460 | Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme | 0.51 | 38.0 | 3.55e-01 | 78.1% | 65.3% |
| 2f96A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 40.0 | 3.20e-01 | 85.4% | 92.0% |
| 2ichA01 | 2.40.370.10 | Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain | 0.50 | 43.0 | 3.56e-01 | 95.8% | 69.8% |
| 8ornD01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.50 | 37.0 | 3.13e-01 | 80.2% | 90.3% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3925444 | 5087.3.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C | 0.68 | 50.0 | 3.89e-01 | 78.1% | 94.3% |
| 4880573 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.65 | 45.0 | 3.41e-01 | 70.8% | 89.3% |
| 4000493 | 6129.1.1.9 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › RGM_C | 0.63 | 48.0 | 3.95e-01 | 80.2% | 78.3% |
| 4027162 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.61 | 42.0 | 2.76e-01 | 71.9% | 57.1% |
| 4160858 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.58 | 41.0 | 3.60e-01 | 74.0% | 81.2% |
| 3603591 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 44.0 | 2.96e-01 | 82.3% | 93.6% |
| 3201714 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 33.0 | 4.06e-01 | 72.9% | 100.0% |
| 3741960 | 5.1.4.242 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N | 0.56 | 42.0 | 2.89e-01 | 79.2% | 44.8% |
| 3681710 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.55 | 43.0 | 4.40e-01 | 83.3% | 93.7% |
| 4944090 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 40.0 | 3.85e-01 | 76.0% | 71.8% |
| 865437 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.55 | 41.0 | 3.55e-01 | 79.2% | 76.2% |
| 3607354 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.54 | 38.0 | 3.39e-01 | 72.9% | 60.9% |
| 3290421 | 2004.1.1.689 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15, AAA_21 | 0.54 | 44.0 | 2.92e-01 | 87.5% | 69.5% |
| 1710492 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.53 | 38.0 | 3.26e-01 | 75.0% | 75.2% |
| 3328359 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.52 | 41.0 | 3.24e-01 | 83.3% | 74.4% |
| None | — | 0.50 | 44.0 | 3.02e-01 | 96.9% | 85.5% | |
| 4977257 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.50 | 37.0 | 2.74e-01 | 78.1% | 36.4% |
| 3634661 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.50 | 35.0 | 3.73e-01 | 88.5% | 82.4% |