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KF981730.1__AHI60831.1__ECBP3_0054__00054

Bact-Vir

KF981730.1__AHI60831.1__ECBP3_0054__00054

Identity

Accession:
KF981730 ↗
Kingdom:
phage

Quality

70.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mtkvariviridae› Nieuwekanaalvirus› Escherichia_phage_KBNP1711

TaxID: 1436889

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-85
PDB
Domain cluster: rep: NC_070983.1__YP_010673223.1__PQC44_gp051__00051__D6-74
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7p0eA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 43.0 3.97e-01 100.0% 56.6%
2z3gB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.63 49.0 4.22e-01 100.0% 53.5%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.63 40.0 3.55e-01 73.8% 46.8%
1yudA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 43.0 3.51e-01 100.0% 37.4%
2yvsA01 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.62 40.0 3.55e-01 87.5% 45.6%
1r5tA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.59 48.0 4.01e-01 100.0% 50.4%
4avaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 37.0 3.08e-01 95.0% 35.4%
2d7nA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 39.0 3.98e-01 100.0% 71.4%
2fr5A00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.58 46.0 3.92e-01 100.0% 51.5%
4b7lA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 40.0 3.75e-01 100.0% 58.0%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.56 44.0 4.53e-01 96.2% 88.2%
1i7dA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.55 39.0 3.28e-01 75.0% 94.3%
4pofA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.55 33.0 3.98e-01 70.0% 98.0%
1hskA01 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.54 39.0 3.35e-01 90.0% 47.2%
1cttA02 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.54 44.0 3.91e-01 100.0% 61.7%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.54 38.0 3.42e-01 73.8% 57.8%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 35.0 3.74e-01 93.8% 80.3%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.53 37.0 3.27e-01 73.8% 56.3%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.52 36.0 3.69e-01 86.3% 74.0%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 3.47e-01 100.0% 56.4%
3gd0A01 2.60.110.10 Mainly Beta › Sandwich › Thaumatin › Thaumatin 0.51 42.0 3.00e-01 92.5% 72.0%
1alo006 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.50 36.0 3.15e-01 76.2% 92.9%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3954037 284.1.1.4 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB 0.65 44.0 4.58e-01 70.0% 96.0%
3959747 284.1.1.0 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.65 45.0 4.64e-01 71.2% 97.3%
3719429 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 44.0 5.00e-01 78.8% 98.3%
4096819 284.1.1.4 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB 0.62 45.0 4.40e-01 76.2% 85.9%
4039738 284.1.1.4 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB 0.60 44.0 4.49e-01 77.5% 83.7%
3333811 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 50.0 3.71e-01 100.0% 47.3%
3779142 2004.1.1.954 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NXPE4_C 0.56 49.0 3.39e-01 100.0% 39.6%
3939200 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.55 40.0 3.36e-01 75.0% 93.1%
4425420 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.54 38.0 3.81e-01 73.8% 80.0%
5022769 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.53 38.0 3.43e-01 96.2% 53.1%
4642857 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 36.0 3.66e-01 70.0% 81.2%
3924183 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 34.0 3.44e-01 100.0% 66.3%
3831780 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.52 31.0 2.90e-01 75.0% 48.0%
5043202 2004.1.2.2 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › PEP carboxykinase catalytic C-terminal domain › PEPCK_ATP 0.51 42.0 2.87e-01 100.0% 40.0%
3604044 1.1.4.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.51 37.0 3.51e-01 77.5% 67.3%
5040431 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 36.0 3.59e-01 96.2% 71.8%
3352566 2487.1.1.7 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.50 40.0 2.97e-01 86.3% 98.0%
3224512 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 44.0 4.07e-01 100.0% 78.6%
3507953 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 39.0 4.20e-01 100.0% 97.1%