←Back to structures

KF981876.1__AIZ01270.1__MaF1725_ph0045__00045

Bact-Vir

KF981876.1__AIZ01270.1__MaF1725_ph0045__00045

Identity

Accession:
KF981876 ↗
Kingdom:
phage

Quality

59.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mycobacterium_phage_ADLER_F1725

TaxID: 1453337

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 80-153
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uypA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.69 60.0 4.03e-01 95.9% 53.7%
3mazA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.68 54.0 4.95e-01 94.6% 64.6%
3vsfC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 54.0 3.59e-01 95.9% 61.7%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.65 54.0 4.54e-01 90.5% 99.2%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 45.0 3.73e-01 74.3% 83.2%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.64 47.0 4.50e-01 81.1% 91.1%
5ji7A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.62 50.0 3.66e-01 87.8% 65.8%
4qt6A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.62 50.0 3.94e-01 89.2% 78.6%
4p9iA00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.61 49.0 3.81e-01 87.8% 70.6%
3zxfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 50.0 4.08e-01 89.2% 89.6%
4xw3A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.61 48.0 3.62e-01 87.8% 74.2%
5xrkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 50.0 4.04e-01 90.5% 87.2%
3zsjA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 50.0 4.11e-01 93.2% 89.1%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 42.0 3.43e-01 75.7% 40.9%
7b2sA01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.59 47.0 3.75e-01 87.8% 81.9%
5c33A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.59 47.0 3.63e-01 90.5% 75.0%
1ewfA02 3.15.20.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 2 › Bactericidal permeability-increasing protein; domain 2 0.59 41.0 2.82e-01 73.0% 46.4%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 50.0 4.27e-01 98.6% 80.6%
4agrB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 48.0 3.90e-01 93.2% 86.8%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.57 46.0 3.39e-01 89.2% 48.1%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 48.0 4.08e-01 93.2% 71.8%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.56 46.0 3.71e-01 89.2% 60.3%
4jqtA01 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.56 47.0 3.50e-01 95.9% 74.6%
3pveA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 3.39e-01 87.8% 70.3%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 42.0 3.13e-01 83.8% 83.4%
3zqsA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.54 44.0 4.29e-01 98.6% 85.2%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 44.0 3.71e-01 93.2% 65.9%
2psbA00 3.50.90.10 Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like 0.53 45.0 3.05e-01 94.6% 80.7%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 43.0 3.20e-01 89.2% 82.1%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.53 44.0 4.34e-01 94.6% 94.9%
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.53 39.0 3.84e-01 82.4% 83.1%
2vz8A04 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.52 43.0 2.99e-01 90.5% 77.2%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 41.0 3.48e-01 91.9% 92.6%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.51 42.0 3.58e-01 89.2% 56.8%
3b8bA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.51 43.0 3.51e-01 100.0% 98.1%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.41e-01 100.0% 50.8%
1k90A02 3.90.1760.10 Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain 0.50 42.0 3.30e-01 95.9% 43.4%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3708732 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.70 60.0 3.94e-01 94.6% 53.4%
1296460 216.2.1.1 ↗ a+b two layers › UBC-like › Thermo-DBP-RP2 C-terminal domain › Thermo-DBP-RP2 C-terminal domain › Thermo-DBP 0.68 59.0 5.30e-01 100.0% 70.8%
3247128 2484.1.1.190 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 0.67 55.0 3.82e-01 91.9% 27.5%
5010183 5.1.3.278 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29948 0.66 55.0 3.55e-01 91.9% 38.2%
3245739 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.65 51.0 3.92e-01 85.1% 84.7%
3226497 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.65 54.0 4.73e-01 93.2% 60.9%
3627567 883.1.1.15 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C 0.65 48.0 3.01e-01 79.7% 30.1%
4026739 220.1.1.277 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF30698 0.65 50.0 4.16e-01 82.4% 74.4%
3349123 883.1.1.15 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C 0.64 47.0 2.86e-01 77.0% 25.8%
4539150 719.1.1.5 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 0.63 47.0 3.89e-01 79.7% 94.1%
3588517 216.1.1.28 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Prok-E2_B 0.63 53.0 4.63e-01 98.6% 80.0%
5059099 241.2.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.63 52.0 4.93e-01 95.9% 77.3%
3487147 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 48.0 3.39e-01 83.8% 74.9%
3224967 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.62 50.0 3.49e-01 91.9% 25.9%
3601907 5.1.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.62 48.0 3.56e-01 82.4% 44.6%
3971301 3784.1.1.4 ↗ a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › DUF4340 0.62 47.0 3.92e-01 83.8% 85.0%
1487392 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.62 50.0 3.94e-01 89.2% 78.6%
3628420 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.62 44.0 3.09e-01 75.7% 41.7%
3325704 5.1.4.222 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 0.62 51.0 3.36e-01 95.9% 48.5%
2095 4976.1.1.1 ↗ beta sandwiches › C-terminal domain in YerB-like proteins › C-terminal domain in YerB-like proteins › C-terminal domain in YerB-like proteins › DUF3048_C 0.61 45.0 3.77e-01 78.4% 90.0%
3260311 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.61 49.0 2.92e-01 87.8% 22.0%
None — 0.61 49.0 3.72e-01 89.2% 67.6%
3710432 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.61 48.0 3.71e-01 87.8% 66.3%
3217785 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.60 51.0 4.01e-01 93.2% 83.9%
3713750 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.60 49.0 3.82e-01 89.2% 81.9%
3188402 4099.1.1.31 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF26204 0.60 47.0 3.54e-01 87.8% 43.0%
3496295 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.60 45.0 3.31e-01 83.8% 77.8%
3677438 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.59 44.0 3.41e-01 81.1% 55.4%
3713868 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.59 48.0 3.58e-01 90.5% 61.0%
3214319 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.59 49.0 3.42e-01 91.9% 91.6%
3630137 883.1.1.15 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C 0.59 42.0 2.62e-01 75.7% 36.0%
5074419 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.59 44.0 4.59e-01 94.6% 92.3%
4247114 4041.1.1.1 ↗ a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.58 49.0 3.58e-01 91.9% 86.5%
3843777 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.58 43.0 3.05e-01 79.7% 44.1%
4011237 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 3.45e-01 91.9% 57.8%
3823382 10.1.1.58 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neprosin 0.58 44.0 3.11e-01 83.8% 63.2%
3993469 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.56 47.0 4.23e-01 98.6% 81.8%
5000298 4041.1.1.0 ↗ a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase 0.56 48.0 3.61e-01 97.3% 87.7%
4026536 220.1.1.53 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C 0.56 47.0 3.98e-01 91.9% 71.8%
3952398 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.54 42.0 2.81e-01 85.1% 34.2%
4003858 883.1.1.15 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C 0.53 40.0 2.48e-01 82.4% 28.4%
3581282 883.1.1.15 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C 0.52 42.0 2.65e-01 93.2% 41.4%
3570861 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.52 44.0 3.26e-01 100.0% 39.5%
3966051 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.51 38.0 3.13e-01 79.7% 60.7%