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KJ002054.2__AHJ10520.1__Spp001_12__00012

Bact-Vir

KJ002054.2__AHJ10520.1__Spp001_12__00012

Identity

Accession:
KJ002054 ↗
Kingdom:
phage

Quality

89.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chaseviridae› Yushanvirus› Shewanella_phage_Spp001

TaxID: 1445859

Cluster

View cluster (18 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-117
PDB
Domain cluster: rep: OP882271.1__WAX22429.1__X__00084__D6-144
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21822.4 best Phage_TAC_15 64.5 2.10e-17 94.7% 93.7%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 28.0 2.73e-01 96.5% 39.8%
1xfiA02 1.20.1700.10 Mainly Alpha › Up-down Bundle › AF1104-like › AF1104-like 0.54 27.0 3.00e-01 85.8% 55.6%
3hgtA00 3.40.50.12360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 44.0 3.31e-01 89.4% 97.6%
7craA02 1.20.58.1480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 32.0 3.54e-01 81.4% 76.1%
2lkiA00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.52 34.0 3.78e-01 91.2% 90.4%
3jrtA00 1.20.120.1060 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.50 40.0 3.58e-01 86.7% 78.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3947952 3103.1.1.3 ↗ alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_15 0.76 63.0 6.68e-01 99.1% 99.0%
3368988 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 36.0 2.75e-01 71.7% 85.5%