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KJ018209.1__AHK11149.1__S14_37__00037

Bact-Vir

KJ018209.1__AHK11149.1__S14_37__00037

Identity

Accession:
KJ018209 ↗
Kingdom:
phage

Quality

86.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-65
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.66 53.0 5.09e-01 90.8% 89.6%
2yrvA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 4.26e-01 87.7% 76.1%
1wb1A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 48.0 3.98e-01 83.1% 65.8%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.62 48.0 4.22e-01 86.2% 55.4%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 44.0 3.69e-01 75.4% 88.2%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 47.0 4.58e-01 83.1% 93.1%
1b12C01 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.61 48.0 3.98e-01 87.7% 57.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 48.0 4.69e-01 86.2% 93.1%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 44.0 4.47e-01 80.0% 92.3%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.61 50.0 4.25e-01 92.3% 79.3%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 43.0 3.68e-01 75.4% 85.2%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 47.0 4.46e-01 84.6% 93.4%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 47.0 4.70e-01 86.2% 83.3%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 48.0 4.79e-01 90.8% 85.3%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.88e-01 92.3% 94.2%
1mrzB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.59 50.0 4.17e-01 92.3% 72.3%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.00e-01 84.6% 55.0%
5e6tA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.59 46.0 4.17e-01 87.7% 100.0%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.58 41.0 3.14e-01 75.4% 62.7%
1havB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 47.0 4.07e-01 89.2% 78.6%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 44.0 4.62e-01 81.5% 94.6%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 4.54e-01 81.5% 91.5%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 4.38e-01 81.5% 87.3%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.57 43.0 3.69e-01 87.7% 48.7%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 46.0 4.03e-01 90.8% 100.0%
1h3zA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 45.0 3.98e-01 93.8% 95.4%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 45.0 4.18e-01 86.2% 78.3%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 42.0 4.27e-01 83.1% 82.8%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 4.43e-01 92.3% 84.9%
2d7eA01 3.40.1440.60 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain 0.56 44.0 3.96e-01 95.4% 62.2%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 44.0 4.53e-01 89.2% 98.4%
2ok5A02 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 45.0 3.22e-01 95.4% 95.4%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 4.13e-01 78.5% 93.5%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 40.0 2.89e-01 80.0% 96.6%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.55 41.0 3.55e-01 83.1% 96.2%
4qv2A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.54 45.0 3.83e-01 96.9% 94.9%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 42.0 3.66e-01 84.6% 58.0%
3cpxA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.54 41.0 4.23e-01 84.6% 100.0%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 41.0 3.63e-01 86.2% 67.3%
3cp7A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 38.0 3.28e-01 76.9% 51.4%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 41.0 4.11e-01 84.6% 87.7%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 42.0 4.15e-01 92.3% 93.2%
5dn6I00 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.53 38.0 3.63e-01 92.3% 65.3%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 39.0 4.11e-01 80.0% 91.5%
2kr7A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.53 33.0 3.51e-01 70.8% 71.9%
4innA00 2.40.128.520 Mainly Beta › Beta Barrel › Lipocalin › 0.53 40.0 3.23e-01 86.2% 60.3%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 43.0 2.68e-01 95.4% 25.8%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 39.0 3.37e-01 81.5% 53.8%
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.53 41.0 3.22e-01 93.8% 74.4%
2greF02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.52 40.0 3.87e-01 86.2% 98.7%
1plsA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 37.0 3.21e-01 76.9% 70.8%
1upqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 38.0 3.37e-01 81.5% 79.4%
1srqA01 3.30.1120.160 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.52 37.0 3.08e-01 80.0% 55.8%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 37.0 3.92e-01 78.5% 100.0%
2cmzA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.52 36.0 3.27e-01 73.8% 80.6%
6mv2A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 39.0 3.51e-01 87.7% 99.0%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 40.0 3.45e-01 86.2% 89.6%
2o8lA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 37.0 3.24e-01 76.9% 50.5%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 42.0 3.78e-01 92.3% 77.2%
2bdvA00 3.90.1680.10 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like 0.51 36.0 2.68e-01 80.0% 89.7%
5ylyA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 39.0 3.38e-01 87.7% 92.0%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 39.0 3.52e-01 89.2% 77.8%
2bn4B03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 41.0 3.19e-01 93.8% 100.0%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 41.0 2.77e-01 96.9% 50.6%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 40.0 3.45e-01 89.2% 98.1%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4034320 4.1.1.398 beta barrels › SH3 › SH3 › SH3 › YolD 0.68 55.0 5.45e-01 87.7% 100.0%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.66 54.0 5.20e-01 90.8% 93.3%
3421158 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.51e-01 86.2% 96.7%
3581696 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 47.0 5.21e-01 78.5% 100.0%
4000280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 49.0 5.29e-01 84.6% 96.4%
3594795 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 52.0 4.49e-01 89.2% 98.1%
3834303 109.4.1.257 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 0.64 48.0 2.86e-01 80.0% 11.9%
3368254 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.63 48.0 5.11e-01 80.0% 98.2%
3828749 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 47.0 4.55e-01 81.5% 96.0%
3850775 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.62 48.0 4.90e-01 87.7% 84.6%
3781440 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.62 50.0 4.65e-01 87.7% 93.8%
4519252 1.1.7.10 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.62 49.0 4.11e-01 87.7% 76.5%
3738126 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.61 49.0 4.38e-01 86.2% 63.3%
3597690 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 54.0 5.28e-01 98.5% 98.6%
127 1.1.7.10 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.61 51.0 4.31e-01 92.3% 74.3%
2605151 4.25.1.1 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › Auxin_resp 0.61 47.0 4.51e-01 83.1% 97.3%
3303889 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.61 47.0 4.56e-01 86.2% 86.7%
3373330 4.1.1.337 beta barrels › SH3 › SH3 › SH3 › CSD_RNase_II 0.61 47.0 4.56e-01 86.2% 80.0%
3926175 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 48.0 4.45e-01 87.7% 70.6%
3558188 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.61 50.0 4.74e-01 89.2% 78.7%
3676844 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.64e-01 87.7% 84.0%
3407820 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 48.0 4.43e-01 89.2% 67.1%
153172 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 47.0 4.27e-01 86.2% 62.2%
3999725 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 47.0 4.29e-01 84.6% 65.9%
4524466 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 46.0 4.57e-01 84.6% 80.0%
3519774 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.08e-01 87.7% 57.1%
3448975 4.1.1.66 beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.59 44.0 4.48e-01 81.5% 96.9%
3492982 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.59 46.0 3.61e-01 84.6% 68.1%
1952922 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.59 47.0 3.96e-01 87.7% 82.6%
3551576 4.1.1.226 beta barrels › SH3 › SH3 › SH3 › KDM3B_Tudor 0.59 47.0 4.56e-01 89.2% 86.7%
3510676 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.19e-01 89.2% 62.1%
3766659 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 46.0 4.74e-01 84.6% 96.7%
3780847 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.58 48.0 3.67e-01 90.8% 58.7%
3406002 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.58 46.0 3.27e-01 90.8% 68.2%
3326980 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.58 45.0 4.62e-01 87.7% 90.0%
3625817 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.58 49.0 4.66e-01 96.9% 90.0%
3768346 4.1.1.226 beta barrels › SH3 › SH3 › SH3 › KDM3B_Tudor 0.58 45.0 4.35e-01 87.7% 96.0%
3449268 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.41e-01 93.8% 95.3%
3279607 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.58 43.0 3.81e-01 81.5% 99.0%
3502290 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 45.0 4.67e-01 84.6% 91.7%
3244497 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.58 48.0 3.64e-01 90.8% 58.7%
4470603 4.1.1.217 beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.58 43.0 3.26e-01 81.5% 54.5%
4420173 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.57 45.0 4.37e-01 87.7% 77.3%
3231925 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 45.0 4.09e-01 95.4% 88.0%
2137682 1.1.5.32 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZNR 0.57 45.0 3.88e-01 86.2% 61.8%
3824346 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 42.0 4.07e-01 86.2% 82.5%
4059465 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.56 44.0 4.41e-01 90.8% 94.1%
4942163 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 44.0 4.42e-01 86.2% 87.7%
3259547 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 47.0 3.86e-01 90.8% 61.7%
3236876 1.1.5.49 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.56 46.0 3.11e-01 95.4% 69.3%
3575865 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.56 44.0 4.32e-01 86.2% 85.7%
4268386 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 45.0 4.48e-01 92.3% 95.7%
3533770 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.56 46.0 4.01e-01 93.8% 59.0%
3737903 4.1.1.286 beta barrels › SH3 › SH3 › SH3 › DUF7072 0.55 41.0 4.34e-01 80.0% 98.2%
3936885 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 41.0 4.20e-01 81.5% 92.3%
3377696 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.55 45.0 3.28e-01 93.8% 74.5%
3213725 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.55 44.0 3.00e-01 92.3% 68.6%
3497365 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.55 40.0 4.31e-01 78.5% 100.0%
3170404 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 43.0 3.84e-01 89.2% 72.0%
3702154 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 43.0 4.14e-01 86.2% 80.0%
3818428 4.1.1.66 beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.55 42.0 4.12e-01 89.2% 90.7%
3476615 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 41.0 3.94e-01 84.6% 100.0%
3512548 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 44.0 3.19e-01 93.8% 74.9%
3574630 220.1.1.161 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 0.54 38.0 3.12e-01 75.4% 61.5%
4795566 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.53 39.0 3.87e-01 80.0% 92.5%
3225849 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.52 40.0 2.88e-01 87.7% 36.4%
3328891 4.1.1.296 beta barrels › SH3 › SH3 › SH3 › TDBD 0.52 38.0 3.81e-01 78.5% 100.0%
3917372 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.52 40.0 3.92e-01 89.2% 88.0%
3572941 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.52 42.0 3.69e-01 93.8% 93.3%
4319764 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.51 42.0 3.59e-01 92.3% 66.4%
3057477 220.1.1.146 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NDK7_N 0.51 38.0 3.51e-01 84.6% 87.9%