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KJ018209.1__AHK11274.1__S14_165__00162
Bact-VirKJ018209.1__AHK11274.1__S14_165__00162
Identity
- Accession:
- KJ018209 ↗
- Kingdom:
- phage
Quality
84.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-38
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6xmpA01 | 2.70.150.10 | Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A | 0.74 | 60.0 | 4.24e-01 | 100.0% | 86.5% |
| 4umwA02 | 2.70.150.10 | Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A | 0.73 | 60.0 | 4.70e-01 | 100.0% | 89.9% |
| 2hc8A00 | 2.70.150.10 | Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A | 0.73 | 58.0 | 4.31e-01 | 100.0% | 70.8% |
| 1pd0A05 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.73 | 57.0 | 4.08e-01 | 100.0% | 38.8% |
| 3efoB05 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.71 | 57.0 | 4.14e-01 | 100.0% | 37.2% |
| 2nutB05 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.70 | 54.0 | 3.93e-01 | 100.0% | 41.1% |
| 7whgG02 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.70 | 55.0 | 4.38e-01 | 100.0% | 87.0% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.69 | 55.0 | 4.43e-01 | 100.0% | 86.0% |
| 2cw8A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.68 | 58.0 | 3.75e-01 | 100.0% | 23.1% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 47.0 | 3.23e-01 | 100.0% | 22.0% |
| 2wv3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 53.0 | 4.04e-01 | 100.0% | 62.0% |
| 1sb2B00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.65 | 45.0 | 3.07e-01 | 97.3% | 21.8% |
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.62 | 51.0 | 3.37e-01 | 100.0% | 22.9% |
| 1pxfA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 43.0 | 3.12e-01 | 100.0% | 27.0% |
| 3p3yA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 46.0 | 3.56e-01 | 97.3% | 59.0% |
| 2cs7A00 | 3.10.50.90 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.58 | 38.0 | 3.43e-01 | 100.0% | 41.8% |
| 1hxdA03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 37.0 | 3.57e-01 | 100.0% | 55.8% |
| 3bfmA02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 3.68e-01 | 100.0% | 62.8% |
| 1v7pB00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.55 | 47.0 | 3.23e-01 | 100.0% | 39.4% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 36.0 | 3.20e-01 | 100.0% | 38.1% |
| 3lcyA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 3.36e-01 | 97.3% | 57.7% |
| 3licA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 42.0 | 2.74e-01 | 100.0% | 19.1% |
| 3e59B02 | 3.30.60.140 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.52 | 41.0 | 4.14e-01 | 97.3% | 92.1% |
| 4kc3B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.31e-01 | 100.0% | 65.3% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4197125 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.88 | 70.0 | 4.84e-01 | 100.0% | 27.5% |
| 4582363 | 192.15.1.86 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Exonuc_VII_L | 0.84 | 68.0 | 4.60e-01 | 100.0% | 26.2% |
| 5016586 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.82 | 68.0 | 4.08e-01 | 100.0% | 14.3% |
| 4033857 | 2.1.1.280 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Exonuc_VII_L | 0.81 | 65.0 | 4.45e-01 | 100.0% | 26.2% |
| 4307531 | 3600.1.1.4 ↗ | alpha bundles › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › Exonuc_VII_L | 0.80 | 64.0 | 4.57e-01 | 100.0% | 30.9% |
| 4576763 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.80 | 64.0 | 3.76e-01 | 100.0% | 11.7% |
| 4533799 | 3860.1.1.173 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › Exonuc_VII_L | 0.79 | 64.0 | 4.26e-01 | 100.0% | 23.3% |
| 3975367 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.78 | 63.0 | 3.69e-01 | 100.0% | 10.9% |
| 4151308 | 192.15.1.86 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Exonuc_VII_L | 0.78 | 63.0 | 4.41e-01 | 100.0% | 28.0% |
| 4128526 | 3600.1.1.4 ↗ | alpha bundles › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › Exonuc_VII_L | 0.78 | 62.0 | 4.37e-01 | 100.0% | 28.0% |
| 4477251 | 2007.1.9.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › Exonuc_VII_L | 0.78 | 62.0 | 3.66e-01 | 100.0% | 11.3% |
| 4050439 | 5046.1.1.148 ↗ | extended segments › F-type ATP synthase subunit b › F-type ATP synthase subunit b › F-type ATP synthase subunit b › Exonuc_VII_L | 0.77 | 62.0 | 4.27e-01 | 100.0% | 25.9% |
| 4211343 | 105.2.1.55 ↗ | alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C › Exonuc_VII_L | 0.77 | 63.0 | 4.03e-01 | 100.0% | 18.9% |
| 3963052 | 4154.1.1.4 ↗ | beta duplicates or obligate multimers › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F-DP heterodimerization region › Exonuc_VII_L | 0.77 | 63.0 | 4.71e-01 | 100.0% | 38.1% |
| 4643564 | 2007.1.3.40 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Exonuc_VII_L | 0.77 | 61.0 | 3.66e-01 | 100.0% | 13.0% |
| 4564227 | 3600.1.1.4 ↗ | alpha bundles › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › Exonuc_VII_L | 0.76 | 63.0 | 4.45e-01 | 100.0% | 30.4% |
| 4057479 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.75 | 60.0 | 3.57e-01 | 100.0% | 11.5% |
| 4112442 | 2007.1.2.29 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Exonuc_VII_L | 0.75 | 61.0 | 3.70e-01 | 100.0% | 13.6% |
| 4106256 | 3600.1.1.4 ↗ | alpha bundles › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › Exonuc_VII_L | 0.75 | 60.0 | 4.27e-01 | 100.0% | 29.2% |
| 3520355 | 10.13.1.0 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A | 0.73 | 59.0 | 4.80e-01 | 100.0% | 92.5% |
| 1159345 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.72 | 57.0 | 5.13e-01 | 100.0% | 85.0% |
| 3396398 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.72 | 61.0 | 5.03e-01 | 100.0% | 55.7% |
| 2966283 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.71 | 56.0 | 4.13e-01 | 100.0% | 58.8% |
| 3401480 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.70 | 56.0 | 4.76e-01 | 100.0% | 55.7% |
| 4966592 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.70 | 60.0 | 5.30e-01 | 100.0% | 72.7% |
| 2524072 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.70 | 59.0 | 3.88e-01 | 100.0% | 24.1% |
| 3271564 | 10.13.1.0 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A | 0.68 | 54.0 | 4.35e-01 | 100.0% | 84.7% |
| 3404035 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.68 | 53.0 | 4.49e-01 | 100.0% | 53.4% |
| 4984220 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.65 | 53.0 | 3.61e-01 | 100.0% | 23.9% |
| 4931825 | 7515.1.1.2 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase | 0.62 | 47.0 | 2.68e-01 | 100.0% | 8.4% |
| 3620099 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.60 | 40.0 | 3.42e-01 | 100.0% | 38.3% |
| 4982797 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.58 | 48.0 | 3.25e-01 | 100.0% | 25.5% |
| 3232049 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.56 | 38.0 | 3.22e-01 | 100.0% | 32.9% |
| 5055840 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.56 | 48.0 | 3.39e-01 | 100.0% | 73.7% |
| 3759316 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.55 | 38.0 | 3.74e-01 | 100.0% | 57.5% |
| 3694987 | 11.1.5.64 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PIG-X | 0.53 | 39.0 | 2.39e-01 | 83.8% | 54.1% |
| 3719965 | 2005.2.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF | 0.52 | 43.0 | 2.55e-01 | 100.0% | 11.4% |
| 4890693 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.52 | 38.0 | 2.31e-01 | 94.6% | 10.1% |
| 4880028 | 247.1.1.8 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL,Lactamase_B_6 | 0.50 | 36.0 | 3.68e-01 | 100.0% | 82.9% |