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KJ018210.1__AHK11409.1__F132_63__00063

Bact-Vir

KJ018210.1__AHK11409.1__F132_63__00063

Identity

Accession:
KJ018210 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Flavobacterium_sp._phage_1/32

TaxID: 1458858

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-12_118-181
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.76 49.0 4.95e-01 97.4% 66.7%
8bddA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.68 60.0 3.87e-01 98.7% 34.4%
4ok4A02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.67 59.0 3.81e-01 98.7% 34.1%
3qv0A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.67 44.0 3.28e-01 89.5% 28.5%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 51.0 3.84e-01 98.7% 34.4%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.65 49.0 3.33e-01 80.3% 40.5%
3u0aA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.65 48.0 3.36e-01 80.3% 32.0%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 54.0 4.49e-01 98.7% 53.0%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 50.0 4.62e-01 84.2% 87.4%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.63 44.0 4.48e-01 78.9% 74.3%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.63 50.0 4.48e-01 89.5% 77.0%
3otlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 46.0 3.67e-01 92.1% 39.2%
1vlrA01 3.30.200.40 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Scavenger mRNA decapping enzyme, N-terminal domain 0.61 47.0 4.31e-01 81.6% 88.8%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 56.0 4.53e-01 100.0% 53.9%
2gxfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 50.0 4.36e-01 90.8% 93.2%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 48.0 3.75e-01 94.7% 40.4%
2arhA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 46.0 3.65e-01 94.7% 39.9%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 50.0 4.28e-01 92.1% 85.8%
6p2kB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 51.0 3.34e-01 100.0% 28.2%
5a67A00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.59 46.0 3.37e-01 84.2% 73.8%
3hqxA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 44.0 3.97e-01 81.6% 97.1%
4j5tA01 2.70.98.110 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycosyl hydrolase family 63, N-terminal domain 0.57 47.0 3.20e-01 94.7% 29.4%
3oh8A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 51.0 4.20e-01 100.0% 54.3%
4nxyA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 46.0 3.52e-01 88.2% 59.7%
1so7A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 49.0 3.19e-01 98.7% 36.3%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.56 46.0 4.76e-01 92.1% 97.1%
3bgtA01 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.56 47.0 3.39e-01 93.4% 77.5%
7snsB01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 51.0 3.96e-01 100.0% 48.1%
2nlvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.56 42.0 3.74e-01 93.4% 54.5%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 40.0 4.32e-01 90.8% 93.7%
4mtsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 44.0 3.67e-01 84.2% 82.9%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 46.0 3.88e-01 90.8% 80.6%
5ksdA04 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.55 47.0 3.78e-01 94.7% 70.3%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 44.0 3.58e-01 100.0% 44.2%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 43.0 3.48e-01 88.2% 59.0%
6psyA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 48.0 3.49e-01 100.0% 59.9%
5evhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 48.0 4.17e-01 100.0% 75.2%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.55 40.0 3.63e-01 90.8% 56.7%
1avgI00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 48.0 3.94e-01 100.0% 63.4%
1xuvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 49.0 3.83e-01 100.0% 51.5%
5aq1A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 44.0 3.03e-01 89.5% 68.1%
2lmeA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.54 45.0 4.00e-01 89.5% 69.5%
2mj7A00 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.54 48.0 3.91e-01 98.7% 71.6%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 46.0 3.95e-01 100.0% 71.1%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 46.0 4.15e-01 100.0% 83.5%
3fh1A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 45.0 3.91e-01 97.4% 81.1%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 47.0 3.75e-01 100.0% 49.7%
3oloA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 41.0 3.76e-01 90.8% 78.4%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.52 46.0 3.41e-01 100.0% 96.9%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 40.0 4.13e-01 100.0% 88.7%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.51 42.0 2.89e-01 94.7% 24.9%
4nn5C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.73e-01 86.8% 99.0%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4566232 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.77 50.0 3.30e-01 100.0% 17.0%
5019287 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.72 49.0 4.70e-01 100.0% 62.4%
3803844 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 61.0 3.82e-01 100.0% 25.3%
3258614 12.3.1.40 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N 0.68 56.0 4.23e-01 90.8% 50.8%
3288017 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.67 56.0 4.51e-01 90.8% 61.4%
3997015 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.67 47.0 3.86e-01 72.4% 95.4%
3597898 5.1.11.13 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_RIC1_2nd 0.65 58.0 3.30e-01 100.0% 12.5%
146266 295.1.1.8 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276 0.65 43.0 4.22e-01 92.1% 61.9%
6331 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.65 54.0 4.47e-01 90.8% 58.6%
3635973 12.3.1.9 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_81 0.65 56.0 3.57e-01 93.4% 33.5%
3291057 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 52.0 5.41e-01 89.5% 95.7%
3743230 5.1.4.36 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.64 57.0 3.52e-01 100.0% 23.1%
3187947 206.1.1.11 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.64 52.0 3.27e-01 89.5% 26.8%
3993127 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 57.0 3.50e-01 100.0% 22.4%
3402405 4.1.1.326 ↗ beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 0.63 43.0 4.69e-01 86.8% 85.7%
3393661 243.19.1.2 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › Chitin_bind_4 0.63 43.0 4.76e-01 86.8% 90.0%
3277839 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.63 52.0 4.16e-01 90.8% 59.3%
3408795 12.1.1.60 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Chitin_bind_4 0.62 43.0 4.70e-01 86.8% 88.5%
3508327 5.1.4.265 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR3_1st 0.62 55.0 3.51e-01 100.0% 33.2%
3629508 5.1.4.262 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_CAF1B_HIR1 0.62 47.0 3.01e-01 89.5% 15.7%
3318685 284.1.3.2 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.62 45.0 4.01e-01 92.1% 55.2%
5798 519.1.1.1 ↗ a+b two layers › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › DcpS 0.61 47.0 4.26e-01 81.6% 86.1%
3711634 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.61 53.0 3.47e-01 100.0% 32.9%
4958029 12.3.1.75 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GDE_N_bis 0.61 52.0 3.74e-01 94.7% 80.5%
3626173 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 51.0 3.38e-01 94.7% 33.8%
3222820 519.1.1.1 ↗ a+b two layers › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › DcpS 0.60 45.0 4.04e-01 80.3% 81.5%
4403022 10.12.1.35 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ppnp 0.60 44.0 4.02e-01 78.9% 99.0%
3818341 331.9.1.4 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla 0.60 45.0 4.52e-01 94.7% 78.2%
3204677 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.60 49.0 3.64e-01 86.8% 88.6%
4443988 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.59 48.0 3.11e-01 96.1% 20.6%
138908 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.59 50.0 4.29e-01 92.1% 85.8%
3257390 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 52.0 3.47e-01 100.0% 31.6%
135454 10.12.1.35 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ppnp 0.58 44.0 3.97e-01 81.6% 97.1%
5050154 223.1.1.76 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_7 0.57 44.0 3.59e-01 85.5% 60.0%
4967080 267.1.1.0 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.57 48.0 3.58e-01 96.1% 63.9%
3520574 5.1.2.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DPPIV_N 0.57 49.0 3.56e-01 100.0% 47.1%
5029476 206.1.1.9 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.56 45.0 3.45e-01 89.5% 45.4%
3596741 267.1.1.0 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.56 49.0 4.02e-01 100.0% 72.4%
3971082 241.2.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.56 45.0 3.79e-01 90.8% 57.0%
3602194 2004.1.1.293 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.55 46.0 3.93e-01 92.1% 65.6%
3587060 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 42.0 4.31e-01 92.1% 88.0%
3702663 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.55 48.0 3.92e-01 97.4% 80.7%
5075975 331.3.1.9 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.55 50.0 3.81e-01 100.0% 49.4%
5004317 267.1.1.0 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.55 46.0 3.85e-01 94.7% 72.9%
828 9.1.1.5 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Triabin 0.55 48.0 3.94e-01 100.0% 63.4%
1828798 9.1.1.5 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Triabin 0.54 44.0 3.54e-01 100.0% 44.2%
3819893 5.1.4.288 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N 0.54 47.0 2.96e-01 100.0% 29.5%
4056826 3816.1.1.1 ↗ beta barrels › Polymyxin B resistance protein › Polymyxin B resistance protein › Polymyxin B resistance protein › PmrD 0.54 38.0 3.75e-01 73.7% 83.7%
6397 243.1.1.30 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4904 0.53 46.0 3.95e-01 100.0% 71.1%
3596932 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.52 41.0 2.73e-01 90.8% 27.6%
3698586 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 41.0 2.69e-01 90.8% 26.2%
3716100 206.1.1.70 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.52 41.0 2.71e-01 90.8% 27.6%
3300968 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 41.0 2.44e-01 100.0% 9.2%
4174628 3816.1.1.1 ↗ beta barrels › Polymyxin B resistance protein › Polymyxin B resistance protein › Polymyxin B resistance protein › PmrD 0.51 36.0 3.58e-01 73.7% 82.5%
None — 0.51 45.0 2.82e-01 100.0% 24.2%
4401582 12.1.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C 0.51 46.0 4.01e-01 97.4% 95.5%
D2 medium residues 13-117
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7qprA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.64 33.0 3.09e-01 100.0% 37.8%
1b48A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.62 37.0 3.74e-01 77.1% 57.8%
3fr3B02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.60 31.0 3.02e-01 92.4% 44.3%
4rfsS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.59 40.0 3.30e-01 100.0% 39.6%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 38.0 3.87e-01 93.3% 66.7%
4jzaA03 1.20.120.1720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.58 37.0 3.31e-01 84.8% 44.4%
2zw3A00 1.20.1440.80 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain 0.57 43.0 3.51e-01 94.3% 42.3%
2odvA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 40.0 4.00e-01 98.1% 69.6%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.55 35.0 3.45e-01 99.0% 58.1%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 29.0 3.33e-01 90.5% 68.4%
3zqmA00 6.10.140.2160 Special › Helix non-globular › Helix Hairpins › 0.54 29.0 3.65e-01 77.1% 91.5%
3edvB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 35.0 3.29e-01 97.1% 51.5%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.53 28.0 3.51e-01 97.1% 84.6%
1gsaA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.52 27.0 3.32e-01 89.5% 80.0%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.51 38.0 4.22e-01 98.1% 98.8%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3988581 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.59 41.0 4.38e-01 99.0% 83.3%
3904873 5001.1.1.3 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 0.59 45.0 3.37e-01 82.9% 81.1%
5060418 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 43.0 4.19e-01 98.1% 70.8%
5058199 4070.1.1.2 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 0.57 39.0 3.09e-01 99.0% 34.4%
4626792 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 43.0 3.88e-01 94.3% 59.3%
3726808 4163.1.1.1 ↗ alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.54 40.0 3.39e-01 79.0% 50.6%
3173926 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 46.0 3.87e-01 94.3% 70.0%
3360754 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.53 35.0 3.18e-01 74.3% 49.0%
3218956 633.23.1.14 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_3 0.53 47.0 3.93e-01 100.0% 94.1%
3972594 3714.1.1.1 ↗ a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › LonC_helical 0.53 47.0 3.56e-01 99.0% 99.6%
3817420 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 45.0 3.84e-01 94.3% 67.4%
3734132 3542.1.1.3 ↗ alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B 0.52 44.0 3.29e-01 99.0% 86.7%
3491256 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.52 45.0 3.79e-01 94.3% 65.7%
4064579 3455.1.1.0 ↗ alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors 0.52 37.0 3.67e-01 75.2% 97.4%
3785619 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.52 43.0 4.16e-01 94.3% 80.9%
3611567 4156.1.1.9 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › MKT1_C 0.51 40.0 3.09e-01 84.8% 68.8%
4069414 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.51 42.0 3.58e-01 100.0% 54.7%
3735230 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.51 43.0 3.86e-01 95.2% 96.1%
4028930 7581.1.1.1 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N 0.51 37.0 2.77e-01 97.1% 29.1%
4410759 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 41.0 4.04e-01 95.2% 80.9%
3599017 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.51 44.0 3.74e-01 93.3% 62.4%
3691414 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.51 42.0 4.16e-01 94.3% 86.4%
3707539 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.51 41.0 3.11e-01 97.1% 35.7%
5035483 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.51 44.0 3.74e-01 94.3% 59.4%
5035139 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 45.0 4.10e-01 98.1% 88.5%
3379095 174.1.1.1 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.51 39.0 3.27e-01 91.4% 47.8%
5073682 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.50 43.0 3.98e-01 95.2% 88.4%
4264452 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.50 30.0 3.63e-01 99.0% 90.0%
5054049 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.50 44.0 4.35e-01 98.1% 94.8%
4564040 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.50 44.0 4.11e-01 98.1% 91.1%
4978893 3755.3.1.632 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin 0.50 43.0 3.93e-01 95.2% 83.6%
5048161 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.50 44.0 4.04e-01 98.1% 77.9%
5045508 304.54.1.0 ↗ a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like 0.50 36.0 3.26e-01 75.2% 55.9%