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KJ018212.1__AHK11671.1__S141_25__00025

Bact-Vir

KJ018212.1__AHK11671.1__S141_25__00025

Identity

Accession:
KJ018212 ↗
Kingdom:
phage

Quality

92.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Shewanella_sp._phage_1/41

TaxID: 1458861

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-94
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uurA04 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 40.0 3.58e-01 75.0% 100.0%
4bgjA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 35.0 3.23e-01 80.4% 50.8%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 35.0 3.24e-01 81.5% 51.2%
1xttB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 40.0 3.15e-01 84.8% 86.1%
5t1dB00 3.10.390.20 Alpha Beta › Roll › SAND domain › Viral glycoprotein L 0.51 33.0 3.25e-01 83.7% 60.6%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.50 35.0 3.19e-01 80.4% 52.3%
2gfuA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 36.0 3.20e-01 75.0% 60.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5074582 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 33.0 3.40e-01 75.0% 56.5%
5034425 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 32.0 3.36e-01 71.7% 56.5%
3744517 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.58 37.0 3.35e-01 79.3% 48.3%
3387865 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 24.0 2.42e-01 75.0% 33.7%
3927687 101.1.1.76 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.55 40.0 4.03e-01 77.2% 97.9%