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KJ018213.1__AHK11723.1__S144_8__00008
Bact-VirKJ018213.1__AHK11723.1__S144_8__00008
Identity
- Accession:
- KJ018213 ↗
- Kingdom:
- phage
Quality
93.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-59
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ye6A02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.72 | 52.0 | 5.20e-01 | 76.8% | 96.6% |
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.69 | 59.0 | 4.62e-01 | 96.4% | 50.4% |
| 2vxgA01 | 6.10.140.270 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 47.0 | 5.04e-01 | 94.6% | 97.8% |
| 2kiwA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.64 | 47.0 | 4.13e-01 | 80.4% | 59.3% |
| 3l9tA01 | 1.10.1240.70 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.62 | 52.0 | 4.71e-01 | 100.0% | 73.5% |
| 2vixA02 | 1.10.150.630 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.58 | 41.0 | 3.68e-01 | 80.4% | 75.3% |
| 2zopA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.57 | 45.0 | 3.73e-01 | 100.0% | 46.4% |
| 3qvmB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 48.0 | 3.12e-01 | 100.0% | 76.1% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.56 | 42.0 | 3.52e-01 | 85.7% | 80.4% |
| 3graA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.56 | 48.0 | 3.33e-01 | 96.4% | 98.4% |
| 2p9xA00 | 1.10.1200.200 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Protein of unknown function DUF3227 | 0.54 | 41.0 | 3.57e-01 | 89.3% | 72.4% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.54 | 46.0 | 3.31e-01 | 100.0% | 88.2% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.53 | 42.0 | 3.90e-01 | 91.1% | 82.7% |
| 2pejA00 | 1.10.1200.210 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX | 0.52 | 38.0 | 3.15e-01 | 82.1% | 44.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3695052 | 109.4.1.363 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tcf25 | 0.79 | 70.0 | 4.05e-01 | 100.0% | 13.5% |
| 3942830 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.69 | 59.0 | 4.98e-01 | 100.0% | 65.0% |
| 3568464 | 4144.2.1.4 ↗ | alpha duplicates or obligate multimers › YejL-like › D domain of Cdc4 and beta-TrCP › D domain of Cdc4 and beta-TrCP › DUF4508 | 0.66 | 55.0 | 4.99e-01 | 98.2% | 92.5% |
| 3826253 | 109.4.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clathrin | 0.66 | 52.0 | 4.23e-01 | 96.4% | 44.3% |
| 3933575 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.65 | 45.0 | 4.11e-01 | 73.2% | 70.7% |
| 4856249 | 151.1.1.1 ↗ | alpha bundles › Hemocyanin-N › Hemocyanin-N › Hemocyanin-N › Hemocyanin_N | 0.63 | 49.0 | 4.65e-01 | 91.1% | 74.3% |
| 4954763 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.60 | 49.0 | 4.31e-01 | 98.2% | 76.7% |
| 4434198 | 1117.1.1.1 ↗ | alpha arrays › Enhancer of polycomb-like protein 1 (Epl1) N-terminal domain › Enhancer of polycomb-like protein 1 (Epl1) N-terminal domain › Enhancer of polycomb-like protein 1 (Epl1) N-terminal domain › EPL1 | 0.59 | 45.0 | 3.16e-01 | 83.9% | 45.6% |
| 3229584 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.57 | 47.0 | 3.52e-01 | 100.0% | 34.4% |
| 4015114 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.52 | 40.0 | 3.48e-01 | 91.1% | 85.0% |