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KJ018214.1AHK11834.1S349_44__00044

Bact-Vir

KJ018214.1__AHK11834.1__S349_44__00044

Identity

Accession:: KJ018214 ↗
Kingdom:: phage

Quality

70.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Shewanella_sp._phage_3/49

TaxID: 1458863

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 707-755

PDB

D2 medium residues 7-115

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2lxwA00	6.10.250.1730	Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.72	19.0	2.79e-01	95.4%	45.5%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3390801	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.53	35.0	3.57e-01	86.2%	67.3%

D3 medium residues 131-213

PDB

Domain cluster: rep: NC_019404.1__YP_006987866.1__D861_gp31__00048__D333-415

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF27114.1 best	Phage_tail_beta	54.5	1.70e-14	78.3%	92.4%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1oqvA00	3.30.1690.10	Alpha Beta › 2-Layer Sandwich › TcpA-like pilin › TcpA-like pilin	0.50	41.0	3.43e-01	98.8%	81.3%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4393394	3856.1.2.1 ↗	beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta	0.77	54.0	6.08e-01	97.6%	93.8%
2581318	3856.1.2.1 ↗	beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta	0.76	51.0	5.65e-01	100.0%	87.7%
3164979	3856.1.2.1 ↗	beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta	0.76	56.0	5.49e-01	100.0%	72.2%
2512672	3856.1.2.1 ↗	beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta	0.75	56.0	6.18e-01	100.0%	98.5%
2485645	3856.1.2.1 ↗	beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta	0.74	55.0	5.40e-01	100.0%	73.9%
2491347	3856.1.2.1 ↗	beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta	0.73	54.0	5.32e-01	100.0%	73.9%
4859120	3856.1.2.0 ↗	beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain	0.72	52.0	4.92e-01	100.0%	64.3%
3251055	3856.1.2.1 ↗	beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta	0.71	53.0	5.70e-01	100.0%	92.9%
2409669	207.2.1.0 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like	0.64	53.0	3.43e-01	89.2%	24.2%
3622767	214.1.1.0 ↗	a+b two layers › SH2 › SH2 › SH2	0.58	36.0	3.44e-01	100.0%	52.6%

D4 medium residues 310-576

PDB

D5 medium residues 577-705

PDB