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KJ019054.1__AIX20497.1__Syn7803C85_34__00034

Bact-Vir

KJ019054.1__AIX20497.1__Syn7803C85_34__00034

Identity

Accession:
KJ019054 ↗
Kingdom:
phage

Quality

52.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Chalconvirus› Synechococcus_phage_ACG-2014e

TaxID: 1493510

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 159-291
PDB
Domain cluster: rep: NC_062734.1__YP_010355371.1__M1M12_gp202__00202__D817-924
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n08A00 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.62 40.0 3.83e-01 84.2% 55.8%
3lidA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 40.0 4.00e-01 71.4% 92.5%
4dduA07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.56 34.0 3.72e-01 77.4% 73.8%
3icyA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 35.0 3.71e-01 75.9% 72.9%
1h7zA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.53 41.0 3.71e-01 84.2% 89.5%
2xbtA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.53 38.0 3.70e-01 76.7% 96.2%
2pslA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.51 43.0 3.72e-01 92.5% 90.3%
1p97A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 38.0 4.07e-01 77.4% 94.7%
4r3aA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 37.0 3.41e-01 76.7% 63.1%
3eehA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 36.0 3.86e-01 74.4% 90.5%
2kdkA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 37.0 4.01e-01 75.2% 97.2%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3483175 1.1.7.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.61 35.0 4.28e-01 91.7% 92.5%
4400928 1.1.7.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.58 37.0 3.86e-01 83.5% 68.0%
3929255 1.1.7.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.58 38.0 3.76e-01 84.2% 61.4%
3166433 1.1.8.19 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_SelB 0.55 35.0 4.09e-01 100.0% 94.4%
5055336 1.1.8.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 0.55 36.0 4.10e-01 98.5% 96.7%
3237970 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 39.0 4.01e-01 74.4% 93.6%
5046884 1.1.8.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 0.54 36.0 4.10e-01 100.0% 98.9%
3174670 1.1.7.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.53 42.0 3.74e-01 84.2% 62.8%
4949125 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.52 38.0 3.67e-01 75.2% 68.7%
5006186 223.1.1.54 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE4 0.52 37.0 2.99e-01 72.2% 52.2%
3922452 244.1.1.17 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › RAE1_2_domI_C 0.52 40.0 4.31e-01 100.0% 95.7%
5047125 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.52 37.0 3.00e-01 75.2% 38.1%
5051461 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 33.0 3.11e-01 77.4% 50.0%
3779337 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.52 37.0 3.53e-01 73.7% 65.8%
4886671 1.1.7.21 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C 0.51 36.0 3.49e-01 100.0% 64.0%
5053150 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 37.0 3.56e-01 78.9% 64.5%
4958865 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.51 37.0 3.81e-01 75.9% 81.5%
4112438 223.1.1.111 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS, PAS_9 0.51 37.0 2.99e-01 76.7% 40.7%
5019121 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.51 37.0 3.96e-01 75.2% 93.0%
138820 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.51 37.0 3.92e-01 75.2% 88.1%
3452416 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.51 37.0 3.57e-01 75.9% 65.8%
3724891 223.2.1.28 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Afi1 0.51 35.0 3.24e-01 76.7% 54.1%
3506163 223.1.1.29 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 0.51 37.0 3.87e-01 75.9% 93.5%
4021156 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 35.0 3.34e-01 75.9% 57.6%
3260215 223.2.1.22 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin 0.50 37.0 3.21e-01 77.4% 49.3%
3386877 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.50 36.0 3.46e-01 75.9% 68.1%
3973000 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 37.0 3.26e-01 75.9% 55.8%