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KJ019061.1__AIX22280.1__Syn7803C92_160__00160
Bact-VirKJ019061.1__AIX22280.1__Syn7803C92_160__00160
Identity
- Accession:
- KJ019061 ↗
- Kingdom:
- phage
Quality
73.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Nereusvirus›
Synechococcus_phage_ACG-2014b
TaxID: 1493508
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 58-129
Domain cluster:
rep: GU075905.1__ADO99942.1__PHM2_164__00164__D192-260
D2
medium
residues 135-190
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 54.0 | 4.39e-01 | 91.1% | 100.0% |
| 3rmiA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.65 | 48.0 | 3.99e-01 | 82.1% | 80.0% |
| 1q8dA00 | 1.10.220.110 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › GDNF binding domain | 0.54 | 37.0 | 3.10e-01 | 71.4% | 84.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3887916 | 3923.1.1.1 ↗ | alpha bundles › Mitotic chromosome determinant-related protein N-terminal domain › Mitotic chromosome determinant-related protein N-terminal domain › Mitotic chromosome determinant-related protein N-terminal domain › Rad21_Rec8_N | 0.86 | 40.0 | 3.26e-01 | 71.4% | 28.4% |
| 3971928 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.70 | 42.0 | 3.82e-01 | 82.1% | 45.3% |
| 4983922 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.67 | 48.0 | 3.12e-01 | 75.0% | 71.1% |
| 3728919 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 50.0 | 3.34e-01 | 78.6% | 34.5% |
| 4881621 | 10.12.1.43 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-Fe_Oxy_2 | 0.63 | 42.0 | 2.84e-01 | 71.4% | 49.6% |
| 4258578 | 604.14.1.1 ↗ | alpha bundles › Spectrin repeat-like › PPK N-terminal domain-like › PPK N-terminal domain-like › PP_kinase_N | 0.57 | 40.0 | 3.23e-01 | 83.9% | 38.1% |
| 3715952 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.56 | 45.0 | 3.80e-01 | 85.7% | 56.7% |
| 3879274 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 45.0 | 2.99e-01 | 91.1% | 55.1% |
| 3430296 | 386.1.1.26 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 | 0.52 | 40.0 | 3.99e-01 | 87.5% | 84.5% |