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KJ019071.1__AIX24468.1__Syn7803US105_124__00124

Bact-Vir

KJ019071.1__AIX24468.1__Syn7803US105_124__00124

Identity

Accession:
KJ019071 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Macariavirus› Synechococcus_phage_ACG-2014g

TaxID: 1493512

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-63
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m03B00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 46.0 4.05e-01 77.0% 62.1%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.60 47.0 3.55e-01 85.2% 42.0%
2ko6A00 1.10.1580.20 Mainly Alpha › Orthogonal Bundle › Conserved Hypothetical Protein Ylqf; Chain: A; domain 2 › Protein of unknown function DUF1040 0.59 42.0 3.76e-01 95.1% 51.7%
3iieB03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.58 44.0 3.97e-01 82.0% 68.2%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 4.31e-01 83.6% 83.9%
1aoaA02 1.10.418.10 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain 0.56 45.0 3.71e-01 95.1% 76.6%
2nt2A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 41.0 3.20e-01 82.0% 85.2%
1uyvB02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.55 44.0 2.99e-01 98.4% 97.3%
2m4eA00 1.20.120.1930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family 0.54 45.0 4.16e-01 100.0% 76.7%
3rm5B02 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.53 35.0 2.50e-01 70.5% 91.5%
3ecsC01 1.20.120.1070 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain 0.51 42.0 3.65e-01 93.4% 71.0%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3173907 2007.2.3.30 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PF29454 0.74 51.0 3.39e-01 88.5% 19.1%
4975796 4953.1.1.0 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.65 49.0 4.31e-01 83.6% 60.0%
3969119 101.1.2.244 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.63 42.0 4.43e-01 83.6% 78.2%
3313062 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.61 42.0 4.04e-01 90.2% 61.3%
3919361 193.1.1.1 ↗ alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH 0.57 48.0 4.49e-01 100.0% 86.3%
3304822 7018.1.1.2 ↗ few secondary structure elements › gp76 helical domain › gp76 helical domain › gp76 helical domain › SAM_AAE17_18 0.57 41.0 3.71e-01 77.0% 55.3%
4425230 102.2.1.0 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH 0.55 42.0 4.27e-01 86.9% 88.3%
4356696 101.1.17.1 ↗ alpha arrays › HTH › HTH › FF domain › Ribosomal_S17e 0.50 37.0 3.55e-01 78.7% 74.3%