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KJ019082.1__AIX26895.1__Syn7803US120_174__00174
Bact-VirKJ019082.1__AIX26895.1__Syn7803US120_174__00174
Identity
- Accession:
- KJ019082 ↗
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Chalconvirus›
Synechococcus_phage_ACG-2014i
TaxID: 1493513
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 479-531
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d3sA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.71 | 49.0 | 3.52e-01 | 73.6% | 48.4% |
| 1z5yE00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.71 | 48.0 | 3.59e-01 | 71.7% | 72.8% |
| 3erwF00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.70 | 49.0 | 3.72e-01 | 75.5% | 82.4% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.69 | 41.0 | 3.79e-01 | 90.6% | 44.9% |
| 4hqsA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.67 | 46.0 | 3.45e-01 | 71.7% | 80.7% |
| 2bmxB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.66 | 47.0 | 3.31e-01 | 75.5% | 66.3% |
| 2vhhA00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.60 | 51.0 | 3.13e-01 | 98.1% | 35.4% |
| 3hkxA00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.59 | 49.0 | 3.24e-01 | 100.0% | 41.1% |
| 3brcA02 | 3.40.50.10150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › B12-dependent dehydatase associated subunit | 0.58 | 52.0 | 4.00e-01 | 100.0% | 94.2% |
| 2ju5A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 43.0 | 3.38e-01 | 83.0% | 93.5% |
| 2dyuA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.58 | 49.0 | 3.16e-01 | 100.0% | 38.1% |
| 1zxuA00 | 2.40.160.200 | Mainly Beta › Beta Barrel › Porin › LURP1-related | 0.58 | 44.0 | 3.22e-01 | 100.0% | 28.4% |
| 1wp0A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 43.0 | 3.16e-01 | 84.9% | 90.6% |
| 1z6nA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 42.0 | 3.01e-01 | 81.1% | 92.2% |
| 4cyfA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.57 | 47.0 | 3.04e-01 | 100.0% | 46.4% |
| 2ymuA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 46.0 | 3.03e-01 | 100.0% | 36.8% |
| 2b3yA05 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.55 | 44.0 | 2.94e-01 | 90.6% | 87.7% |
| 2kzbA00 | 2.60.40.2830 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 38.0 | 3.08e-01 | 73.6% | 64.0% |
| 2hh8A00 | 3.30.1810.10 | Alpha Beta › 2-Layer Sandwich › YdfO-like fold › YdfO-like | 0.55 | 40.0 | 3.23e-01 | 84.9% | 96.1% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 42.0 | 2.72e-01 | 84.9% | 52.5% |
| 4g59C02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.55 | 47.0 | 3.42e-01 | 100.0% | 65.2% |
| 2mhdA00 | 2.40.128.370 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 43.0 | 3.48e-01 | 92.5% | 48.2% |
| 5x7qA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.53 | 44.0 | 3.02e-01 | 100.0% | 40.3% |
| 3nctA00 | 3.40.50.11880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Plasmid SOS inhibition protein | 0.52 | 45.0 | 3.39e-01 | 100.0% | 57.7% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969784 | 3425.2.1.0 ↗ | a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain | 0.76 | 50.0 | 3.12e-01 | 73.6% | 13.6% |
| 3997493 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.73 | 51.0 | 3.34e-01 | 73.6% | 28.4% |
| 4243634 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.65 | 45.0 | 4.07e-01 | 73.6% | 81.3% |
| 4944536 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 46.0 | 4.28e-01 | 73.6% | 69.2% |
| 3297928 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.64 | 53.0 | 3.69e-01 | 94.3% | 50.3% |
| 4422293 | 4959.1.1.0 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit | 0.64 | 42.0 | 3.22e-01 | 94.3% | 29.0% |
| 4543449 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.64 | 44.0 | 2.90e-01 | 73.6% | 22.2% |
| 5038140 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.63 | 48.0 | 3.41e-01 | 84.9% | 83.3% |
| 3877350 | 109.46.1.18 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › WD40, Beta-prop_NOL10_N, Beta-prop_IFT122_1st | 0.62 | 52.0 | 3.05e-01 | 96.2% | 25.2% |
| 4535556 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.62 | 52.0 | 3.05e-01 | 96.2% | 26.0% |
| 3806012 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.62 | 51.0 | 3.13e-01 | 92.5% | 32.4% |
| 3230964 | 5.1.12.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains | 0.61 | 39.0 | 2.47e-01 | 92.5% | 11.6% |
| 3490985 | 5.1.4.254 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N | 0.61 | 52.0 | 3.21e-01 | 98.1% | 36.5% |
| 5008209 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 40.0 | 3.47e-01 | 88.7% | 45.0% |
| 5075465 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.60 | 38.0 | 3.73e-01 | 84.9% | 56.7% |
| 1906715 | 7504.1.1.4 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › HcgB | 0.60 | 54.0 | 3.82e-01 | 100.0% | 73.2% |
| 4323715 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.60 | 41.0 | 2.83e-01 | 73.6% | 26.5% |
| 3731092 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.59 | 41.0 | 3.02e-01 | 73.6% | 26.2% |
| 4845616 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.58 | 42.0 | 4.50e-01 | 100.0% | 93.2% |
| 4886242 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.57 | 39.0 | 2.67e-01 | 73.6% | 24.1% |
| 4433757 | 3347.1.1.3 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › RHS_repeat, DUF6531 | 0.57 | 44.0 | 2.56e-01 | 100.0% | 9.9% |
| 4216435 | 3735.1.1.12 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell | 0.56 | 45.0 | 2.66e-01 | 92.5% | 60.4% |
| 4210618 | 3735.1.1.12 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell | 0.56 | 43.0 | 2.53e-01 | 100.0% | 9.9% |
| 3677092 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.55 | 44.0 | 2.84e-01 | 98.1% | 44.8% |
| 3189888 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.55 | 41.0 | 3.26e-01 | 94.3% | 37.5% |
| 3621467 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.54 | 44.0 | 3.05e-01 | 100.0% | 26.5% |
| 3788224 | 243.6.1.4 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA | 0.54 | 46.0 | 3.86e-01 | 100.0% | 77.9% |
| 5075159 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.54 | 45.0 | 3.22e-01 | 100.0% | 30.9% |
| 3476644 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 36.0 | 3.94e-01 | 96.2% | 92.5% |
| 4084551 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.53 | 39.0 | 2.79e-01 | 83.0% | 28.1% |
| 3357709 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.53 | 39.0 | 3.55e-01 | 86.8% | 67.1% |
| 2096155 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.53 | 44.0 | 3.01e-01 | 100.0% | 41.2% |
| 3509766 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.52 | 44.0 | 2.88e-01 | 96.2% | 36.8% |
| 3824358 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.52 | 43.0 | 3.03e-01 | 100.0% | 27.4% |
| 3701822 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.52 | 41.0 | 2.77e-01 | 100.0% | 42.9% |
| 3484705 | 220.1.1.61 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 | 0.51 | 38.0 | 2.94e-01 | 96.2% | 32.1% |
| 3574057 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.50 | 41.0 | 2.84e-01 | 100.0% | 27.0% |
D2
high
residues 549-641
Domain cluster:
rep: IMGVR_UViG_3300010235_000004-3300010235-Ga0136247_100002931__D99-185
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13884.12 best | Peptidase_S74 | 45.7 | 8.60e-12 | 59.1% | 82.8% |
D3
medium
residues 13-76
Domain cluster:
representative
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3192216 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.53 | 35.0 | 3.56e-01 | 71.9% | 68.8% |