←Back to structures
KJ019119.1__AIX36166.1__Syn7803US65_184__00184
Bact-VirKJ019119.1__AIX36166.1__Syn7803US65_184__00184
Identity
- Accession:
- KJ019119 ↗
- Kingdom:
- phage
Quality
64.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Lowelvirus›
Synechococcus_phage_ACG-2014d
TaxID: 1493509
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 52-96
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fvvA02 | 1.20.1440.100 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › SG protein - dephosphorylation function | 0.73 | 50.0 | 4.32e-01 | 73.3% | 100.0% |
| 2rkhA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 59.0 | 4.73e-01 | 91.1% | 84.1% |
| 3dd9D02 | 6.10.140.2060 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 51.0 | 5.33e-01 | 77.8% | 87.8% |
| 7r97A01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.72 | 60.0 | 4.29e-01 | 100.0% | 66.9% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 56.0 | 5.36e-01 | 91.1% | 80.0% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 48.0 | 3.68e-01 | 82.2% | 43.0% |
| 7ce1A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.66 | 43.0 | 4.08e-01 | 88.9% | 57.7% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 53.0 | 5.06e-01 | 100.0% | 82.8% |
| 1icrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.65 | 54.0 | 3.45e-01 | 93.3% | 23.6% |
| 3fixA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.64 | 45.0 | 3.08e-01 | 75.6% | 22.4% |
| 5mmiJ02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.64 | 45.0 | 4.01e-01 | 77.8% | 82.6% |
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.62 | 52.0 | 4.21e-01 | 100.0% | 89.2% |
| 2ii2A02 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.62 | 43.0 | 3.95e-01 | 73.3% | 65.5% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 52.0 | 4.12e-01 | 97.8% | 45.7% |
| 2qkmB01 | 1.10.10.1050 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Dcp2, box A domain | 0.60 | 43.0 | 3.39e-01 | 77.8% | 39.2% |
| 1z72A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.57 | 49.0 | 3.18e-01 | 100.0% | 94.4% |
| 1ldjA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.55 | 42.0 | 3.19e-01 | 86.7% | 50.4% |
| 2m3aA00 | 1.10.10.1900 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Knl-2 Myb-like DNA-binding domain-like | 0.54 | 37.0 | 3.44e-01 | 80.0% | 52.2% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.47e-01 | 77.8% | 50.7% |
| 1anxA04 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.54 | 39.0 | 3.42e-01 | 80.0% | 62.5% |
| 3qkaE02 | 1.10.287.2460 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 37.0 | 3.80e-01 | 77.8% | 76.7% |
| 6ofsA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.50 | 43.0 | 2.81e-01 | 100.0% | 40.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026625 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.84 | 75.0 | 4.38e-01 | 100.0% | 19.4% |
| 3957225 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.82 | 63.0 | 4.38e-01 | 84.4% | 31.4% |
| 4018722 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.77 | 61.0 | 5.16e-01 | 100.0% | 51.2% |
| 3391169 | 103.4.1.25 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › PF27628 | 0.72 | 60.0 | 5.30e-01 | 100.0% | 74.3% |
| 3297133 | 103.4.1.5 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 | 0.67 | 55.0 | 4.82e-01 | 100.0% | 80.0% |
| 4634286 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.66 | 44.0 | 4.63e-01 | 75.6% | 80.0% |
| 3254545 | 103.11.1.0 ↗ | alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related | 0.65 | 52.0 | 4.98e-01 | 100.0% | 76.4% |
| 4862621 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.65 | 54.0 | 3.49e-01 | 93.3% | 23.1% |
| 4320349 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.63 | 51.0 | 3.19e-01 | 91.1% | 31.2% |
| 3820506 | 102.1.1.32 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_9 | 0.62 | 50.0 | 3.94e-01 | 91.1% | 83.0% |
| 4929490 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.59 | 44.0 | 3.54e-01 | 82.2% | 70.5% |
| 4017561 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 49.0 | 2.95e-01 | 100.0% | 18.3% |
| 3352389 | 101.1.10.58 ↗ | alpha arrays › HTH › HTH › Cyclin-like › PF30926 | 0.56 | 41.0 | 3.92e-01 | 80.0% | 70.9% |
| 3996692 | 544.1.1.1 ↗ | alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Prp18 | 0.55 | 47.0 | 3.40e-01 | 100.0% | 84.3% |